RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 DISP2A7MBM2 1401 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 RXRBP28702 533 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 PLEKHO1Q53GL0 409 aaPredicted RBP8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 CCDC146Q8IYE0 955 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 RUNDC1Q96C34 613 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 SPG7Q9UQ90 795 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 RGPD2P0DJD1 1756 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 GLI3P10071 1580 aa8.73□□□□□ -1.01
CHRNA3-204ENST00000559002 EXOC5O00471 708 aa8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 DDB1Q16531 1140 aa8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 AMOTQ4VCS5 1084 aa8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 POTEAQ6S8J7 498 aa8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 GAS2L2Q8NHY3 880 aa8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
CHRNA3-204ENST00000559002 TNS2Q63HR2 1409 aa8.71□□□□□ -1.01
CHRNA3-204ENST00000559002 PARP4Q9UKK3 1724 aaKnown RBP8.71□□□□□ -1.01
CHRNA3-204ENST00000559002 C1orf141Q5JVX7 400 aa8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 ZNF530Q6P9A1 599 aaPredicted RBP8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 SEPT12Q8IYM1 358 aa8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 PLEKHF1Q96S99 279 aa8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 PCDH11XQ9BZA7 1347 aa8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 PCDH11YQ9BZA8 1340 aa8.71□□□□□ -1.02
CHRNA3-204ENST00000559002 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
CHRNA3-204ENST00000559002 PDE3BQ13370 1112 aa8.7□□□□□ -1.02
CHRNA3-204ENST00000559002 MTHFSDQ2M296 383 aaKnown RBP8.7□□□□□ -1.02
CHRNA3-204ENST00000559002 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
CHRNA3-204ENST00000559002 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
CHRNA3-204ENST00000559002 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 APAF1O14727 1248 aa8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 NFE2L2Q16236 605 aa8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 DDX54Q8TDD1 881 aaKnown RBP8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 RRP7AQ9Y3A4 280 aaKnown RBP8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
CHRNA3-204ENST00000559002 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 RIPK4P57078 832 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 LMOD3Q0VAK6 560 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 AKAP4Q5JQC9 854 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 RTF1Q92541 710 aaKnown RBP8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 MAP3K5Q99683 1374 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 RGS12O14924 1447 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
CHRNA3-204ENST00000559002 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
CHRNA3-204ENST00000559002 CYP27B1O15528 508 aa8.67□□□□□ -1.02
CHRNA3-204ENST00000559002 PHKG2P15735 406 aa8.67□□□□□ -1.02
CHRNA3-204ENST00000559002 KRT27Q7Z3Y8 459 aa8.67□□□□□ -1.02
CHRNA3-204ENST00000559002 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHRNA3-204ENST00000559002 NGEFQ8N5V2 710 aa8.66□□□□□ -1.02
CHRNA3-204ENST00000559002 MARCH10Q8NA82 808 aaPredicted RBP8.66□□□□□ -1.02
CHRNA3-204ENST00000559002 DCAF5Q96JK2 942 aa8.66□□□□□ -1.02
CHRNA3-204ENST00000559002 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
CHRNA3-204ENST00000559002 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
CHRNA3-204ENST00000559002 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
CHRNA3-204ENST00000559002 YTHDC1Q96MU7 727 aaKnown RBP8.65□□□□□ -1.02
CHRNA3-204ENST00000559002 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 TEFQ10587 303 aa8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 NKX1-1Q15270 411 aaPredicted RBP8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 MCM10Q7L590 875 aa8.64□□□□□ -1.03
CHRNA3-204ENST00000559002 KDM6AO15550 1401 aaPredicted RBP8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 SHANK3Q9BYB0 1731 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 CABP4P57796 275 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 DCTN1Q14203 1278 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 FAM196AQ6ZSG2 479 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 TRIM35Q9UPQ4 493 aa8.63□□□□□ -1.03
CHRNA3-204ENST00000559002 ERVV-2B6SEH9 535 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 WWC1Q8IX03 1113 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 IL17REQ8NFR9 667 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 THUMPD2Q9BTF0 503 aaKnown RBP8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 LGR6Q9HBX8 967 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 TMOD3Q9NYL9 352 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 BCL9O00512 1426 aa8.62□□□□□ -1.03
CHRNA3-204ENST00000559002 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
CHRNA3-204ENST00000559002 ZBED9Q6R2W3 1325 aa8.61□□□□□ -1.03
CHRNA3-204ENST00000559002 MRC1P22897 1456 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 BRWD3Q6RI45 1802 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 PRIM1P49642 420 aaKnown RBP8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 GNAI1P63096 354 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 TAF7Q15545 349 aaPredicted RBP8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 WDR63Q8IWG1 891 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 NFATC2IPQ8NCF5 419 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 LAS1LQ9Y4W2 734 aaKnown RBP8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 DOT1LQ8TEK3 1739 aa8.6□□□□□ -1.03
CHRNA3-204ENST00000559002 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
CHRNA3-204ENST00000559002 IL16Q14005 1332 aa8.59□□□□□ -1.03
CHRNA3-204ENST00000559002 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
CHRNA3-204ENST00000559002 GOLGA2Q08379 1002 aa8.59□□□□□ -1.03
CHRNA3-204ENST00000559002 TTC5Q8N0Z6 440 aa8.59□□□□□ -1.03
CHRNA3-204ENST00000559002 IFT57Q9NWB7 429 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms