RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 CGNL1Q0VF96 1302 aa20.91■□□□□ 0.94
SMAD6-203ENST00000558937 USHBP1Q8N6Y0 703 aa20.91■□□□□ 0.94
SMAD6-203ENST00000558937 EMILIN1Q9Y6C2 1016 aa20.91■□□□□ 0.94
SMAD6-203ENST00000558937 ZCRB1Q8TBF4 217 aaKnown RBP20.89■□□□□ 0.93
SMAD6-203ENST00000558937 MAP2P11137 1827 aaKnown RBP20.89■□□□□ 0.93
SMAD6-203ENST00000558937 PAPPAQ13219 1627 aa20.89■□□□□ 0.93
SMAD6-203ENST00000558937 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
SMAD6-203ENST00000558937 RAPGEF4Q8WZA2 1011 aa20.86■□□□□ 0.93
SMAD6-203ENST00000558937 SPON1Q9HCB6 807 aa20.85■□□□□ 0.93
SMAD6-203ENST00000558937 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
SMAD6-203ENST00000558937 SLC15A2Q16348 729 aa20.84■□□□□ 0.93
SMAD6-203ENST00000558937 NCAPD2Q15021 1401 aa20.84■□□□□ 0.93
SMAD6-203ENST00000558937 NSD2O96028 1365 aa20.84■□□□□ 0.93
SMAD6-203ENST00000558937 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
SMAD6-203ENST00000558937 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
SMAD6-203ENST00000558937 PANK3Q9H999 370 aa20.83■□□□□ 0.93
SMAD6-203ENST00000558937 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.92
SMAD6-203ENST00000558937 SYTL4Q96C24 671 aaPredicted RBP20.82■□□□□ 0.92
SMAD6-203ENST00000558937 LY75O60449 1722 aa20.81■□□□□ 0.92
SMAD6-203ENST00000558937 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
SMAD6-203ENST00000558937 PRIM1P49642 420 aaKnown RBP20.81■□□□□ 0.92
SMAD6-203ENST00000558937 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
SMAD6-203ENST00000558937 LRRC4BQ9NT99 713 aa20.8■□□□□ 0.92
SMAD6-203ENST00000558937 PCDH11XQ9BZA7 1347 aa20.79■□□□□ 0.92
SMAD6-203ENST00000558937 PCDH11YQ9BZA8 1340 aa20.79■□□□□ 0.92
SMAD6-203ENST00000558937 ZBTB7AO95365 584 aa20.79■□□□□ 0.92
SMAD6-203ENST00000558937 TNNT2P45379 298 aaPredicted RBP20.79■□□□□ 0.92
SMAD6-203ENST00000558937 PPP1R1BQ9UD71 204 aaPredicted RBP20.79■□□□□ 0.92
SMAD6-203ENST00000558937 ZNF827Q17R98 1081 aa20.78■□□□□ 0.92
SMAD6-203ENST00000558937 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
SMAD6-203ENST00000558937 QSER1Q2KHR3 1735 aa20.76■□□□□ 0.91
SMAD6-203ENST00000558937 SLC27A3Q5K4L6 730 aa20.76■□□□□ 0.91
SMAD6-203ENST00000558937 EYA1Q99502 592 aa20.76■□□□□ 0.91
SMAD6-203ENST00000558937 CYP27B1O15528 508 aa20.75■□□□□ 0.91
SMAD6-203ENST00000558937 TUBGCP6Q96RT7 1819 aa20.75■□□□□ 0.91
SMAD6-203ENST00000558937 ATF5Q9Y2D1 282 aaPredicted RBP20.74■□□□□ 0.91
SMAD6-203ENST00000558937 ITGB4P16144 1822 aa20.74■□□□□ 0.91
SMAD6-203ENST00000558937 KCNQ4P56696 695 aa20.73■□□□□ 0.91
SMAD6-203ENST00000558937 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
SMAD6-203ENST00000558937 AKT1S1Q96B36 256 aa20.73■□□□□ 0.91
SMAD6-203ENST00000558937 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
SMAD6-203ENST00000558937 PTGER2P43116 358 aa20.72■□□□□ 0.91
SMAD6-203ENST00000558937 MTFR1LQ9H019 292 aa20.72■□□□□ 0.91
SMAD6-203ENST00000558937 MORC1Q86VD1 984 aa20.7■□□□□ 0.9
SMAD6-203ENST00000558937 CCNL1Q9UK58 526 aaPredicted RBP20.7■□□□□ 0.9
SMAD6-203ENST00000558937 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
SMAD6-203ENST00000558937 KNSTRNQ9Y448 316 aa20.7■□□□□ 0.9
SMAD6-203ENST00000558937 C5P01031 1676 aa20.68■□□□□ 0.9
SMAD6-203ENST00000558937 SGIP1Q9BQI5 828 aa20.68■□□□□ 0.9
SMAD6-203ENST00000558937 IGSF1Q8N6C5 1336 aa20.68■□□□□ 0.9
SMAD6-203ENST00000558937 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
SMAD6-203ENST00000558937 MPRIPQ6WCQ1 1025 aa20.67■□□□□ 0.9
SMAD6-203ENST00000558937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMAD6-203ENST00000558937 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
SMAD6-203ENST00000558937 PALLDQ8WX93 1383 aa20.67■□□□□ 0.9
SMAD6-203ENST00000558937 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
SMAD6-203ENST00000558937 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
SMAD6-203ENST00000558937 COL24A1Q17RW2 1714 aa20.65■□□□□ 0.9
SMAD6-203ENST00000558937 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
SMAD6-203ENST00000558937 TFCP2L1Q9NZI6 479 aa20.65■□□□□ 0.9
SMAD6-203ENST00000558937 PHKG2P15735 406 aa20.63■□□□□ 0.89
SMAD6-203ENST00000558937 IFNL2Q8IZJ0 200 aa20.63■□□□□ 0.89
SMAD6-203ENST00000558937 SLC16A10Q8TF71 515 aa20.62■□□□□ 0.89
SMAD6-203ENST00000558937 PIGBQ92521 554 aa20.62■□□□□ 0.89
SMAD6-203ENST00000558937 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
SMAD6-203ENST00000558937 FHDC1Q9C0D6 1143 aaPredicted RBP20.61■□□□□ 0.89
SMAD6-203ENST00000558937 ARXQ96QS3 562 aa20.6■□□□□ 0.89
SMAD6-203ENST00000558937 C4BP0C0L5 1744 aa20.6■□□□□ 0.89
SMAD6-203ENST00000558937 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
SMAD6-203ENST00000558937 SYT17Q9BSW7 474 aa20.59■□□□□ 0.89
SMAD6-203ENST00000558937 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
SMAD6-203ENST00000558937 PER1O15534 1290 aaPredicted RBP20.58■□□□□ 0.89
SMAD6-203ENST00000558937 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
SMAD6-203ENST00000558937 PLEKHO1Q53GL0 409 aaPredicted RBP20.57■□□□□ 0.88
SMAD6-203ENST00000558937 COL23A1Q86Y22 540 aaPredicted RBP20.57■□□□□ 0.88
SMAD6-203ENST00000558937 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
SMAD6-203ENST00000558937 POLD1P28340 1107 aa20.56■□□□□ 0.88
SMAD6-203ENST00000558937 IL13P35225 146 aa20.56■□□□□ 0.88
SMAD6-203ENST00000558937 KDRP35968 1356 aa20.56■□□□□ 0.88
SMAD6-203ENST00000558937 KDM6AO15550 1401 aaPredicted RBP20.55■□□□□ 0.88
SMAD6-203ENST00000558937 MSH5O43196 834 aa20.55■□□□□ 0.88
SMAD6-203ENST00000558937 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
SMAD6-203ENST00000558937 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
SMAD6-203ENST00000558937 UBR3Q6ZT12 1888 aa20.55■□□□□ 0.88
SMAD6-203ENST00000558937 LOC102724428A0A0B4J2F2 783 aa20.54■□□□□ 0.88
SMAD6-203ENST00000558937 SIK1P57059 783 aa20.54■□□□□ 0.88
SMAD6-203ENST00000558937 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
SMAD6-203ENST00000558937 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
SMAD6-203ENST00000558937 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
SMAD6-203ENST00000558937 ASAP1Q9ULH1 1129 aa20.54■□□□□ 0.88
SMAD6-203ENST00000558937 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
SMAD6-203ENST00000558937 MTHFSP49914 203 aa20.53■□□□□ 0.88
SMAD6-203ENST00000558937 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
SMAD6-203ENST00000558937 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
SMAD6-203ENST00000558937 AK7Q96M32 723 aa20.52■□□□□ 0.88
SMAD6-203ENST00000558937 ATG3Q9NT62 314 aa20.52■□□□□ 0.88
SMAD6-203ENST00000558937 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
SMAD6-203ENST00000558937 KLHL34Q8N239 644 aa20.51■□□□□ 0.87
SMAD6-203ENST00000558937 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
SMAD6-203ENST00000558937 ITPK1Q13572 414 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms