RNA–Protein interactions for RNA: ENST00000558886.1

NEO1-205, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-205ENST00000558886 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
NEO1-205ENST00000558886 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
NEO1-205ENST00000558886 PRKAR2BP31323 418 aa13.86□□□□□ -0.19
NEO1-205ENST00000558886 DDB1Q16531 1140 aa13.86□□□□□ -0.19
NEO1-205ENST00000558886 PNISRQ8TF01 805 aaKnown RBP13.86□□□□□ -0.19
NEO1-205ENST00000558886 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
NEO1-205ENST00000558886 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
NEO1-205ENST00000558886 AMOTQ4VCS5 1084 aa13.85□□□□□ -0.19
NEO1-205ENST00000558886 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
NEO1-205ENST00000558886 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
NEO1-205ENST00000558886 ZCRB1Q8TBF4 217 aaKnown RBP13.85□□□□□ -0.19
NEO1-205ENST00000558886 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
NEO1-205ENST00000558886 RGPD2P0DJD1 1756 aa13.84□□□□□ -0.19
NEO1-205ENST00000558886 DDX54Q8TDD1 881 aaKnown RBP13.84□□□□□ -0.19
NEO1-205ENST00000558886 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
NEO1-205ENST00000558886 KDRP35968 1356 aa13.83□□□□□ -0.2
NEO1-205ENST00000558886 C1orf141Q5JVX7 400 aa13.82□□□□□ -0.2
NEO1-205ENST00000558886 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
NEO1-205ENST00000558886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
NEO1-205ENST00000558886 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
NEO1-205ENST00000558886 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
NEO1-205ENST00000558886 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
NEO1-205ENST00000558886 RUNDC1Q96C34 613 aa13.81□□□□□ -0.2
NEO1-205ENST00000558886 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
NEO1-205ENST00000558886 MEGF6O75095 1541 aa13.8□□□□□ -0.2
NEO1-205ENST00000558886 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
NEO1-205ENST00000558886 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 IFNL2Q8IZJ0 200 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 PCDH11XQ9BZA7 1347 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 PCDH11YQ9BZA8 1340 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 OVOS2A0A0G2JMS6 1433 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 DISP2A7MBM2 1401 aa13.79□□□□□ -0.2
NEO1-205ENST00000558886 HSP90AB1P08238 724 aaKnown RBP13.78□□□□□ -0.2
NEO1-205ENST00000558886 PLEKHF1Q96S99 279 aa13.78□□□□□ -0.2
NEO1-205ENST00000558886 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
NEO1-205ENST00000558886 AKAP4Q5JQC9 854 aa13.77□□□□□ -0.21
NEO1-205ENST00000558886 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.21
NEO1-205ENST00000558886 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
NEO1-205ENST00000558886 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
NEO1-205ENST00000558886 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.21
NEO1-205ENST00000558886 PARP4Q9UKK3 1724 aaKnown RBP13.76□□□□□ -0.21
NEO1-205ENST00000558886 EP400Q96L91 3159 aa13.76□□□□□ -0.21
NEO1-205ENST00000558886 PHKG2P15735 406 aa13.76□□□□□ -0.21
NEO1-205ENST00000558886 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
NEO1-205ENST00000558886 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 TNS2Q63HR2 1409 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 APAF1O14727 1248 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 CYP27B1O15528 508 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 RIPK4P57078 832 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
NEO1-205ENST00000558886 TMPOP42166 694 aaKnown RBP13.74□□□□□ -0.21
NEO1-205ENST00000558886 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
NEO1-205ENST00000558886 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
NEO1-205ENST00000558886 RRP7AQ9Y3A4 280 aaKnown RBP13.74□□□□□ -0.21
NEO1-205ENST00000558886 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
NEO1-205ENST00000558886 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
NEO1-205ENST00000558886 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
NEO1-205ENST00000558886 WNK3Q9BYP7 1800 aa13.73□□□□□ -0.21
NEO1-205ENST00000558886 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
NEO1-205ENST00000558886 BAG6P46379 1132 aa13.72□□□□□ -0.21
NEO1-205ENST00000558886 NKX1-1Q15270 411 aaPredicted RBP13.72□□□□□ -0.21
NEO1-205ENST00000558886 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
NEO1-205ENST00000558886 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
NEO1-205ENST00000558886 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.21
NEO1-205ENST00000558886 CABP4P57796 275 aa13.71□□□□□ -0.21
NEO1-205ENST00000558886 ACSBG1Q96GR2 724 aa13.71□□□□□ -0.21
NEO1-205ENST00000558886 LRRC37A3O60309 1634 aa13.71□□□□□ -0.22
NEO1-205ENST00000558886 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
NEO1-205ENST00000558886 RNMTO43148 476 aaKnown RBP13.7□□□□□ -0.22
NEO1-205ENST00000558886 TRIM37O94972 964 aa13.7□□□□□ -0.22
NEO1-205ENST00000558886 PRIM1P49642 420 aaKnown RBP13.7□□□□□ -0.22
NEO1-205ENST00000558886 TEFQ10587 303 aa13.7□□□□□ -0.22
NEO1-205ENST00000558886 LGR6Q9HBX8 967 aa13.7□□□□□ -0.22
NEO1-205ENST00000558886 EN1Q05925 392 aaPredicted RBP13.69□□□□□ -0.22
NEO1-205ENST00000558886 MCM10Q7L590 875 aa13.69□□□□□ -0.22
NEO1-205ENST00000558886 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
NEO1-205ENST00000558886 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
NEO1-205ENST00000558886 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
NEO1-205ENST00000558886 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
NEO1-205ENST00000558886 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
NEO1-205ENST00000558886 IL17REQ8NFR9 667 aa13.68□□□□□ -0.22
NEO1-205ENST00000558886 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
NEO1-205ENST00000558886 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
NEO1-205ENST00000558886 APBA3O96018 575 aa13.66□□□□□ -0.22
NEO1-205ENST00000558886 BCL11BQ9C0K0 894 aaPredicted RBP13.66□□□□□ -0.22
NEO1-205ENST00000558886 LAS1LQ9Y4W2 734 aaKnown RBP13.66□□□□□ -0.22
NEO1-205ENST00000558886 KCNQ2O43526 872 aa13.65□□□□□ -0.22
NEO1-205ENST00000558886 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
NEO1-205ENST00000558886 CCDC27Q2M243 656 aa13.65□□□□□ -0.22
NEO1-205ENST00000558886 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
NEO1-205ENST00000558886 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
NEO1-205ENST00000558886 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
NEO1-205ENST00000558886 TRIM35Q9UPQ4 493 aa13.65□□□□□ -0.22
NEO1-205ENST00000558886 BCL9O00512 1426 aa13.64□□□□□ -0.23
NEO1-205ENST00000558886 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
NEO1-205ENST00000558886 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
NEO1-205ENST00000558886 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms