RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 CLSPNQ9HAW4 1339 aa22.53■■□□□ 1.2
CDC42BPB-203ENST00000558867 A0A1W2PP64 1363 aa22.52■■□□□ 1.2
CDC42BPB-203ENST00000558867 ANKRD36BQ8N2N9 1353 aa22.51■■□□□ 1.19
CDC42BPB-203ENST00000558867 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
CDC42BPB-203ENST00000558867 PRIM1P49642 420 aaKnown RBP22.51■■□□□ 1.19
CDC42BPB-203ENST00000558867 PNPLA7Q6ZV29 1317 aa22.51■■□□□ 1.19
CDC42BPB-203ENST00000558867 GIGYF1O75420 1035 aaPredicted RBP22.5■■□□□ 1.19
CDC42BPB-203ENST00000558867 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
CDC42BPB-203ENST00000558867 MSH5O43196 834 aa22.49■■□□□ 1.19
CDC42BPB-203ENST00000558867 GRIN3BO60391 1043 aa22.49■■□□□ 1.19
CDC42BPB-203ENST00000558867 CCNL1Q9UK58 526 aaPredicted RBP22.47■■□□□ 1.19
CDC42BPB-203ENST00000558867 HOXC9P31274 260 aa22.46■■□□□ 1.19
CDC42BPB-203ENST00000558867 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
CDC42BPB-203ENST00000558867 USP47Q96K76 1375 aa22.46■■□□□ 1.19
CDC42BPB-203ENST00000558867 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
CDC42BPB-203ENST00000558867 TONSLQ96HA7 1378 aa22.45■■□□□ 1.18
CDC42BPB-203ENST00000558867 KCNQ4P56696 695 aa22.43■■□□□ 1.18
CDC42BPB-203ENST00000558867 RAPGEF4Q8WZA2 1011 aa22.43■■□□□ 1.18
CDC42BPB-203ENST00000558867 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
CDC42BPB-203ENST00000558867 FLAD1Q8NFF5 587 aa22.42■■□□□ 1.18
CDC42BPB-203ENST00000558867 COL24A1Q17RW2 1714 aa22.42■■□□□ 1.18
CDC42BPB-203ENST00000558867 RTL1A6NKG5 1358 aa22.41■■□□□ 1.18
CDC42BPB-203ENST00000558867 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
CDC42BPB-203ENST00000558867 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
CDC42BPB-203ENST00000558867 LY75O60449 1722 aa22.4■■□□□ 1.18
CDC42BPB-203ENST00000558867 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.17
CDC42BPB-203ENST00000558867 NSD2O96028 1365 aa22.38■■□□□ 1.17
CDC42BPB-203ENST00000558867 COL23A1Q86Y22 540 aaPredicted RBP22.38■■□□□ 1.17
CDC42BPB-203ENST00000558867 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
CDC42BPB-203ENST00000558867 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
CDC42BPB-203ENST00000558867 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
CDC42BPB-203ENST00000558867 MEGF6O75095 1541 aa22.36■■□□□ 1.17
CDC42BPB-203ENST00000558867 NBPF6Q5VWK0 638 aa22.35■■□□□ 1.17
CDC42BPB-203ENST00000558867 NBPF4Q96M43 638 aa22.35■■□□□ 1.17
CDC42BPB-203ENST00000558867 CD2APQ9Y5K6 639 aa22.35■■□□□ 1.17
CDC42BPB-203ENST00000558867 PCDH11XQ9BZA7 1347 aa22.34■■□□□ 1.17
CDC42BPB-203ENST00000558867 PCDH11YQ9BZA8 1340 aa22.34■■□□□ 1.17
CDC42BPB-203ENST00000558867 FBLN1P23142 703 aa22.34■■□□□ 1.17
CDC42BPB-203ENST00000558867 RRS1Q15050 365 aaKnown RBP22.34■■□□□ 1.17
CDC42BPB-203ENST00000558867 TESK2Q96S53 571 aa22.34■■□□□ 1.17
CDC42BPB-203ENST00000558867 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.16
CDC42BPB-203ENST00000558867 TMF1P82094 1093 aa22.32■■□□□ 1.16
CDC42BPB-203ENST00000558867 MSL1Q68DK7 614 aa22.32■■□□□ 1.16
CDC42BPB-203ENST00000558867 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
CDC42BPB-203ENST00000558867 RGPD2P0DJD1 1756 aa22.32■■□□□ 1.16
CDC42BPB-203ENST00000558867 SHANK3Q9BYB0 1731 aa22.31■■□□□ 1.16
CDC42BPB-203ENST00000558867 USHBP1Q8N6Y0 703 aa22.31■■□□□ 1.16
CDC42BPB-203ENST00000558867 FYB1O15117 783 aa22.3■■□□□ 1.16
CDC42BPB-203ENST00000558867 CDCA8Q53HL2 280 aa22.3■■□□□ 1.16
CDC42BPB-203ENST00000558867 MPRIPQ6WCQ1 1025 aa22.3■■□□□ 1.16
CDC42BPB-203ENST00000558867 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
CDC42BPB-203ENST00000558867 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
CDC42BPB-203ENST00000558867 PALLDQ8WX93 1383 aa22.29■■□□□ 1.16
CDC42BPB-203ENST00000558867 AK7Q96M32 723 aa22.29■■□□□ 1.16
CDC42BPB-203ENST00000558867 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
CDC42BPB-203ENST00000558867 INSRP06213 1382 aa22.28■■□□□ 1.16
CDC42BPB-203ENST00000558867 GPBP1L1Q9HC44 474 aaPredicted RBP22.28■■□□□ 1.16
CDC42BPB-203ENST00000558867 FLT4P35916 1363 aa22.27■■□□□ 1.16
CDC42BPB-203ENST00000558867 C5P01031 1676 aa22.27■■□□□ 1.16
CDC42BPB-203ENST00000558867 HSP90AB2PQ58FF8 381 aa22.26■■□□□ 1.15
CDC42BPB-203ENST00000558867 ATP10DQ9P241 1426 aa22.25■■□□□ 1.15
CDC42BPB-203ENST00000558867 IFFO2Q5TF58 517 aa22.24■■□□□ 1.15
CDC42BPB-203ENST00000558867 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
CDC42BPB-203ENST00000558867 CEP350Q5VT06 3117 aa22.21■■□□□ 1.15
CDC42BPB-203ENST00000558867 CYP27B1O15528 508 aa22.21■■□□□ 1.15
CDC42BPB-203ENST00000558867 TAF1LQ8IZX4 1826 aa22.2■■□□□ 1.14
CDC42BPB-203ENST00000558867 PHF14O94880 888 aa22.2■■□□□ 1.14
CDC42BPB-203ENST00000558867 SSFA2P28290 1259 aa22.2■■□□□ 1.14
CDC42BPB-203ENST00000558867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.19■■□□□ 1.14
CDC42BPB-203ENST00000558867 C4BP0C0L5 1744 aa22.19■■□□□ 1.14
CDC42BPB-203ENST00000558867 IGSF1Q8N6C5 1336 aa22.18■■□□□ 1.14
CDC42BPB-203ENST00000558867 PPM1GO15355 546 aaPredicted RBP22.17■■□□□ 1.14
CDC42BPB-203ENST00000558867 NKX1-1Q15270 411 aaPredicted RBP22.17■■□□□ 1.14
CDC42BPB-203ENST00000558867 PIGBQ92521 554 aa22.17■■□□□ 1.14
CDC42BPB-203ENST00000558867 TMOD3Q9NYL9 352 aa22.17■■□□□ 1.14
CDC42BPB-203ENST00000558867 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
CDC42BPB-203ENST00000558867 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
CDC42BPB-203ENST00000558867 HSPA6P17066 643 aa22.16■■□□□ 1.14
CDC42BPB-203ENST00000558867 SIK1P57059 783 aa22.16■■□□□ 1.14
CDC42BPB-203ENST00000558867 ZNF526Q8TF50 670 aaPredicted RBP22.16■■□□□ 1.14
CDC42BPB-203ENST00000558867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDC42BPB-203ENST00000558867 ITGB4P16144 1822 aa22.15■■□□□ 1.14
CDC42BPB-203ENST00000558867 ADCY9O60503 1353 aa22.14■■□□□ 1.14
CDC42BPB-203ENST00000558867 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
CDC42BPB-203ENST00000558867 IFNL2Q8IZJ0 200 aa22.13■■□□□ 1.13
CDC42BPB-203ENST00000558867 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
CDC42BPB-203ENST00000558867 GNPATO15228 680 aa22.12■■□□□ 1.13
CDC42BPB-203ENST00000558867 ATP6V1AP38606 617 aa22.12■■□□□ 1.13
CDC42BPB-203ENST00000558867 UBR3Q6ZT12 1888 aa22.11■■□□□ 1.13
CDC42BPB-203ENST00000558867 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
CDC42BPB-203ENST00000558867 LINC00116Q8NCU8 138 aa22.1■■□□□ 1.13
CDC42BPB-203ENST00000558867 TOGARAM1Q9Y4F4 1720 aa22.1■■□□□ 1.13
CDC42BPB-203ENST00000558867 WWC3Q9ULE0 1092 aa22.09■■□□□ 1.13
CDC42BPB-203ENST00000558867 AMIGO3Q86WK7 504 aa22.08■■□□□ 1.13
CDC42BPB-203ENST00000558867 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
CDC42BPB-203ENST00000558867 NCAPD2Q15021 1401 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 MMP10P09238 476 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 TGFB2P61812 414 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 TRAPPC3LQ5T215 181 aa22.07■■□□□ 1.12
CDC42BPB-203ENST00000558867 NLGN1Q8N2Q7 840 aa22.07■■□□□ 1.12
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