RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 ITGB4P16144 1822 aa18.94■□□□□ 0.62
VPS18-203ENST00000558855 CLSPNQ9HAW4 1339 aa18.94■□□□□ 0.62
VPS18-203ENST00000558855 ZBTB7AO95365 584 aa18.93■□□□□ 0.62
VPS18-203ENST00000558855 ZNF827Q17R98 1081 aa18.93■□□□□ 0.62
VPS18-203ENST00000558855 SPON1Q9HCB6 807 aa18.93■□□□□ 0.62
VPS18-203ENST00000558855 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
VPS18-203ENST00000558855 COL24A1Q17RW2 1714 aa18.92■□□□□ 0.62
VPS18-203ENST00000558855 KCNQ4P56696 695 aa18.92■□□□□ 0.62
VPS18-203ENST00000558855 SLC15A2Q16348 729 aa18.92■□□□□ 0.62
VPS18-203ENST00000558855 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
VPS18-203ENST00000558855 INSRP06213 1382 aa18.92■□□□□ 0.62
VPS18-203ENST00000558855 PTGER2P43116 358 aa18.91■□□□□ 0.62
VPS18-203ENST00000558855 TAF1LQ8IZX4 1826 aa18.9■□□□□ 0.62
VPS18-203ENST00000558855 FLT4P35916 1363 aa18.9■□□□□ 0.62
VPS18-203ENST00000558855 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
VPS18-203ENST00000558855 STK32BQ9NY57 414 aa18.89■□□□□ 0.61
VPS18-203ENST00000558855 ATF5Q9Y2D1 282 aaPredicted RBP18.89■□□□□ 0.61
VPS18-203ENST00000558855 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
VPS18-203ENST00000558855 PRIM1P49642 420 aaKnown RBP18.88■□□□□ 0.61
VPS18-203ENST00000558855 CDCA8Q53HL2 280 aa18.88■□□□□ 0.61
VPS18-203ENST00000558855 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
VPS18-203ENST00000558855 C5P01031 1676 aa18.87■□□□□ 0.61
VPS18-203ENST00000558855 SGIP1Q9BQI5 828 aa18.87■□□□□ 0.61
VPS18-203ENST00000558855 SMG6Q86US8 1419 aaKnown RBP18.86■□□□□ 0.61
VPS18-203ENST00000558855 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
VPS18-203ENST00000558855 SYTL4Q96C24 671 aaPredicted RBP18.85■□□□□ 0.61
VPS18-203ENST00000558855 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
VPS18-203ENST00000558855 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
VPS18-203ENST00000558855 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
VPS18-203ENST00000558855 CYP27B1O15528 508 aa18.82■□□□□ 0.6
VPS18-203ENST00000558855 PNPLA7Q6ZV29 1317 aa18.81■□□□□ 0.6
VPS18-203ENST00000558855 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
VPS18-203ENST00000558855 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
VPS18-203ENST00000558855 PPM1GO15355 546 aaPredicted RBP18.8■□□□□ 0.6
VPS18-203ENST00000558855 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
VPS18-203ENST00000558855 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
VPS18-203ENST00000558855 MTFR1LQ9H019 292 aa18.8■□□□□ 0.6
VPS18-203ENST00000558855 CGNL1Q0VF96 1302 aa18.79■□□□□ 0.6
VPS18-203ENST00000558855 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS18-203ENST00000558855 WASHC2AQ641Q2 1341 aa18.78■□□□□ 0.6
VPS18-203ENST00000558855 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
VPS18-203ENST00000558855 EYA1Q99502 592 aa18.78■□□□□ 0.6
VPS18-203ENST00000558855 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
VPS18-203ENST00000558855 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
VPS18-203ENST00000558855 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
VPS18-203ENST00000558855 SLC27A3Q5K4L6 730 aa18.77■□□□□ 0.6
VPS18-203ENST00000558855 PANK3Q9H999 370 aa18.77■□□□□ 0.6
VPS18-203ENST00000558855 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
VPS18-203ENST00000558855 C4BP0C0L5 1744 aa18.77■□□□□ 0.59
VPS18-203ENST00000558855 EIF4A2Q14240 407 aaKnown RBP18.75■□□□□ 0.59
VPS18-203ENST00000558855 SYT17Q9BSW7 474 aa18.74■□□□□ 0.59
VPS18-203ENST00000558855 CCNL1Q9UK58 526 aaPredicted RBP18.74■□□□□ 0.59
VPS18-203ENST00000558855 UTRNP46939 3433 aa18.73■□□□□ 0.59
VPS18-203ENST00000558855 PALLDQ8WX93 1383 aa18.73■□□□□ 0.59
VPS18-203ENST00000558855 AMIGO3Q86WK7 504 aa18.73■□□□□ 0.59
VPS18-203ENST00000558855 CHD4Q14839 1912 aa18.71■□□□□ 0.59
VPS18-203ENST00000558855 MPRIPQ6WCQ1 1025 aa18.71■□□□□ 0.59
VPS18-203ENST00000558855 SMIM5Q71RC9 77 aa18.71■□□□□ 0.59
VPS18-203ENST00000558855 ARXQ96QS3 562 aa18.71■□□□□ 0.59
VPS18-203ENST00000558855 VIRMAQ69YN4 1812 aaKnown RBP18.71■□□□□ 0.59
VPS18-203ENST00000558855 COL23A1Q86Y22 540 aaPredicted RBP18.7■□□□□ 0.58
VPS18-203ENST00000558855 PIGBQ92521 554 aa18.7■□□□□ 0.58
VPS18-203ENST00000558855 TFCP2L1Q9NZI6 479 aa18.7■□□□□ 0.58
VPS18-203ENST00000558855 IGSF1Q8N6C5 1336 aa18.7■□□□□ 0.58
VPS18-203ENST00000558855 YY1P25490 414 aa18.69■□□□□ 0.58
VPS18-203ENST00000558855 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
VPS18-203ENST00000558855 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
VPS18-203ENST00000558855 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
VPS18-203ENST00000558855 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
VPS18-203ENST00000558855 PHKG2P15735 406 aa18.67■□□□□ 0.58
VPS18-203ENST00000558855 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
VPS18-203ENST00000558855 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
VPS18-203ENST00000558855 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
VPS18-203ENST00000558855 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
VPS18-203ENST00000558855 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
VPS18-203ENST00000558855 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
VPS18-203ENST00000558855 SCN11AQ9UI33 1791 aa18.65■□□□□ 0.58
VPS18-203ENST00000558855 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.58
VPS18-203ENST00000558855 ASAP1Q9ULH1 1129 aa18.64■□□□□ 0.57
VPS18-203ENST00000558855 AMER1Q5JTC6 1135 aaPredicted RBP18.63■□□□□ 0.57
VPS18-203ENST00000558855 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
VPS18-203ENST00000558855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS18-203ENST00000558855 ZNF831Q5JPB2 1677 aa18.63■□□□□ 0.57
VPS18-203ENST00000558855 ITPK1Q13572 414 aa18.62■□□□□ 0.57
VPS18-203ENST00000558855 KLHL34Q8N239 644 aa18.62■□□□□ 0.57
VPS18-203ENST00000558855 KDRP35968 1356 aa18.62■□□□□ 0.57
VPS18-203ENST00000558855 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
VPS18-203ENST00000558855 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
VPS18-203ENST00000558855 TJP1Q07157 1748 aa18.61■□□□□ 0.57
VPS18-203ENST00000558855 MORC1Q86VD1 984 aa18.61■□□□□ 0.57
VPS18-203ENST00000558855 MSH5O43196 834 aa18.6■□□□□ 0.57
VPS18-203ENST00000558855 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
VPS18-203ENST00000558855 SLC4A9Q96Q91 983 aa18.6■□□□□ 0.57
VPS18-203ENST00000558855 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
VPS18-203ENST00000558855 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
VPS18-203ENST00000558855 SIK1P57059 783 aa18.59■□□□□ 0.57
VPS18-203ENST00000558855 TMOD3Q9NYL9 352 aa18.59■□□□□ 0.57
VPS18-203ENST00000558855 KIAA1551Q9HCM1 1747 aa18.59■□□□□ 0.57
VPS18-203ENST00000558855 SMARCC1Q92922 1105 aaPredicted RBP18.58■□□□□ 0.56
VPS18-203ENST00000558855 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms