RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
SEMA4B-205ENST00000558848 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
SEMA4B-205ENST00000558848 INSRP06213 1382 aa16.51■□□□□ 0.23
SEMA4B-205ENST00000558848 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
SEMA4B-205ENST00000558848 MYOM1P52179 1685 aa16.5■□□□□ 0.23
SEMA4B-205ENST00000558848 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
SEMA4B-205ENST00000558848 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
SEMA4B-205ENST00000558848 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
SEMA4B-205ENST00000558848 FLT4P35916 1363 aa16.48■□□□□ 0.23
SEMA4B-205ENST00000558848 MAP3K5Q99683 1374 aa16.48■□□□□ 0.23
SEMA4B-205ENST00000558848 NCAPD2Q15021 1401 aa16.47■□□□□ 0.23
SEMA4B-205ENST00000558848 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
SEMA4B-205ENST00000558848 YY1P25490 414 aa16.46■□□□□ 0.23
SEMA4B-205ENST00000558848 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
SEMA4B-205ENST00000558848 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 LY75O60449 1722 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
SEMA4B-205ENST00000558848 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
SEMA4B-205ENST00000558848 KIF20BQ96Q89 1820 aa16.44■□□□□ 0.22
SEMA4B-205ENST00000558848 COL24A1Q17RW2 1714 aa16.44■□□□□ 0.22
SEMA4B-205ENST00000558848 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
SEMA4B-205ENST00000558848 ARXQ96QS3 562 aa16.43■□□□□ 0.22
SEMA4B-205ENST00000558848 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
SEMA4B-205ENST00000558848 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
SEMA4B-205ENST00000558848 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
SEMA4B-205ENST00000558848 KCNQ4P56696 695 aa16.42■□□□□ 0.22
SEMA4B-205ENST00000558848 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
SEMA4B-205ENST00000558848 ANKRD26Q9UPS8 1709 aa16.42■□□□□ 0.22
SEMA4B-205ENST00000558848 CYP27B1O15528 508 aa16.41■□□□□ 0.22
SEMA4B-205ENST00000558848 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
SEMA4B-205ENST00000558848 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
SEMA4B-205ENST00000558848 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
SEMA4B-205ENST00000558848 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-205ENST00000558848 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
SEMA4B-205ENST00000558848 KAT6BQ8WYB5 2073 aa16.39■□□□□ 0.21
SEMA4B-205ENST00000558848 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
SEMA4B-205ENST00000558848 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
SEMA4B-205ENST00000558848 TUBGCP6Q96RT7 1819 aa16.38■□□□□ 0.21
SEMA4B-205ENST00000558848 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
SEMA4B-205ENST00000558848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.21
SEMA4B-205ENST00000558848 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
SEMA4B-205ENST00000558848 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
SEMA4B-205ENST00000558848 EYA1Q99502 592 aa16.35■□□□□ 0.21
SEMA4B-205ENST00000558848 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
SEMA4B-205ENST00000558848 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
SEMA4B-205ENST00000558848 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
SEMA4B-205ENST00000558848 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
SEMA4B-205ENST00000558848 POLD1P28340 1107 aa16.33■□□□□ 0.2
SEMA4B-205ENST00000558848 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
SEMA4B-205ENST00000558848 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA4B-205ENST00000558848 MPRIPQ6WCQ1 1025 aa16.32■□□□□ 0.2
SEMA4B-205ENST00000558848 PIGBQ92521 554 aa16.32■□□□□ 0.2
SEMA4B-205ENST00000558848 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 EIF4A2Q14240 407 aaKnown RBP16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 ZNF784Q8NCA9 323 aaPredicted RBP16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
SEMA4B-205ENST00000558848 C5P01031 1676 aa16.3■□□□□ 0.2
SEMA4B-205ENST00000558848 MAP2P11137 1827 aaKnown RBP16.3■□□□□ 0.2
SEMA4B-205ENST00000558848 PHKG2P15735 406 aa16.29■□□□□ 0.2
SEMA4B-205ENST00000558848 FLAD1Q8NFF5 587 aa16.29■□□□□ 0.2
SEMA4B-205ENST00000558848 ITGB4P16144 1822 aa16.29■□□□□ 0.2
SEMA4B-205ENST00000558848 TAF1LQ8IZX4 1826 aa16.29■□□□□ 0.2
SEMA4B-205ENST00000558848 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
SEMA4B-205ENST00000558848 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
SEMA4B-205ENST00000558848 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
SEMA4B-205ENST00000558848 PANK3Q9H999 370 aa16.28■□□□□ 0.2
SEMA4B-205ENST00000558848 IFNL2Q8IZJ0 200 aa16.27■□□□□ 0.2
SEMA4B-205ENST00000558848 C4BP0C0L5 1744 aa16.27■□□□□ 0.19
SEMA4B-205ENST00000558848 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
SEMA4B-205ENST00000558848 SIK1P57059 783 aa16.25■□□□□ 0.19
SEMA4B-205ENST00000558848 GPR162Q16538 588 aa16.25■□□□□ 0.19
SEMA4B-205ENST00000558848 CHD4Q14839 1912 aa16.24■□□□□ 0.19
SEMA4B-205ENST00000558848 TNNT2P45379 298 aaPredicted RBP16.24■□□□□ 0.19
SEMA4B-205ENST00000558848 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
SEMA4B-205ENST00000558848 MSH5O43196 834 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 SSFA2P28290 1259 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 MSL1Q68DK7 614 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 TMOD3Q9NYL9 352 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
SEMA4B-205ENST00000558848 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
SEMA4B-205ENST00000558848 YBX3P16989 372 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■□□□ 11.4
SEMA4B-205ENST00000558848 ITPK1Q13572 414 aa16.22■□□□□ 0.19
SEMA4B-205ENST00000558848 AK7Q96M32 723 aa16.22■□□□□ 0.19
SEMA4B-205ENST00000558848 KDRP35968 1356 aa16.22■□□□□ 0.19
SEMA4B-205ENST00000558848 UBR3Q6ZT12 1888 aa16.22■□□□□ 0.19
SEMA4B-205ENST00000558848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.21■□□□□ 0.19
SEMA4B-205ENST00000558848 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
SEMA4B-205ENST00000558848 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
SEMA4B-205ENST00000558848 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
SEMA4B-205ENST00000558848 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
SEMA4B-205ENST00000558848 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms