RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
PSMA4-207ENST00000558635 ERBB3P21860 1342 aa14.05□□□□□ -0.16
PSMA4-207ENST00000558635 SPATA31A5Q5VU36 1347 aa14.05□□□□□ -0.16
PSMA4-207ENST00000558635 SPATA31A7Q8IWB4 1347 aa14.05□□□□□ -0.16
PSMA4-207ENST00000558635 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
PSMA4-207ENST00000558635 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.04□□□□□ -0.16
PSMA4-207ENST00000558635 RXRBP28702 533 aa14.04□□□□□ -0.16
PSMA4-207ENST00000558635 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
PSMA4-207ENST00000558635 RALBP1Q15311 655 aa14.04□□□□□ -0.16
PSMA4-207ENST00000558635 PHF12Q96QT6 1004 aa14.04□□□□□ -0.16
PSMA4-207ENST00000558635 TSPYL2Q9H2G4 693 aaPredicted RBP14.03□□□□□ -0.16
PSMA4-207ENST00000558635 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
PSMA4-207ENST00000558635 USP35Q9P2H5 1018 aa14.03□□□□□ -0.16
PSMA4-207ENST00000558635 SPATA31A1Q5TZJ5 1347 aa14.03□□□□□ -0.16
PSMA4-207ENST00000558635 CRB1P82279 1406 aa14.03□□□□□ -0.16
PSMA4-207ENST00000558635 RGPD5Q99666 1765 aa14.03□□□□□ -0.16
PSMA4-207ENST00000558635 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
PSMA4-207ENST00000558635 CARD10Q9BWT7 1032 aa14.02□□□□□ -0.17
PSMA4-207ENST00000558635 PRKRIP1Q9H875 184 aaPredicted RBP14.02□□□□□ -0.17
PSMA4-207ENST00000558635 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
PSMA4-207ENST00000558635 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
PSMA4-207ENST00000558635 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
PSMA4-207ENST00000558635 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
PSMA4-207ENST00000558635 NBPF6Q5VWK0 638 aa14□□□□□ -0.17
PSMA4-207ENST00000558635 NBPF4Q96M43 638 aa14□□□□□ -0.17
PSMA4-207ENST00000558635 GLI3P10071 1580 aa14□□□□□ -0.17
PSMA4-207ENST00000558635 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
PSMA4-207ENST00000558635 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
PSMA4-207ENST00000558635 MYBBP1AQ9BQG0 1328 aaKnown RBP13.98□□□□□ -0.17
PSMA4-207ENST00000558635 ANP32CO43423 234 aa13.98□□□□□ -0.17
PSMA4-207ENST00000558635 ONECUT3O60422 494 aaPredicted RBP13.98□□□□□ -0.17
PSMA4-207ENST00000558635 IL13P35225 146 aa13.98□□□□□ -0.17
PSMA4-207ENST00000558635 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
PSMA4-207ENST00000558635 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
PSMA4-207ENST00000558635 EYA1Q99502 592 aa13.98□□□□□ -0.17
PSMA4-207ENST00000558635 A0A0G2JS52 829 aa13.97□□□□□ -0.17
PSMA4-207ENST00000558635 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
PSMA4-207ENST00000558635 MYT1Q01538 1121 aa13.97□□□□□ -0.17
PSMA4-207ENST00000558635 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.17
PSMA4-207ENST00000558635 SEPT12Q8IYM1 358 aa13.96□□□□□ -0.17
PSMA4-207ENST00000558635 RASEFQ8IZ41 740 aa13.96□□□□□ -0.17
PSMA4-207ENST00000558635 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
PSMA4-207ENST00000558635 DCBLD2Q96PD2 775 aa13.95□□□□□ -0.18
PSMA4-207ENST00000558635 RGS12O14924 1447 aa13.95□□□□□ -0.18
PSMA4-207ENST00000558635 IL2RBP14784 551 aa13.94□□□□□ -0.18
PSMA4-207ENST00000558635 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
PSMA4-207ENST00000558635 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
PSMA4-207ENST00000558635 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
PSMA4-207ENST00000558635 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
PSMA4-207ENST00000558635 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
PSMA4-207ENST00000558635 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
PSMA4-207ENST00000558635 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
PSMA4-207ENST00000558635 FAM208AQ9UK61 1670 aaKnown RBP13.93□□□□□ -0.18
PSMA4-207ENST00000558635 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
PSMA4-207ENST00000558635 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
PSMA4-207ENST00000558635 DIEXFQ68CQ4 756 aaKnown RBP13.92□□□□□ -0.18
PSMA4-207ENST00000558635 SULT6B1Q6IMI4 303 aa13.92□□□□□ -0.18
PSMA4-207ENST00000558635 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
PSMA4-207ENST00000558635 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
PSMA4-207ENST00000558635 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
PSMA4-207ENST00000558635 TATP17735 454 aaPredicted RBP13.91□□□□□ -0.18
PSMA4-207ENST00000558635 NUBP1P53384 320 aa13.91□□□□□ -0.18
PSMA4-207ENST00000558635 DDB1Q16531 1140 aa13.91□□□□□ -0.18
PSMA4-207ENST00000558635 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
PSMA4-207ENST00000558635 EXOC5O00471 708 aa13.9□□□□□ -0.18
PSMA4-207ENST00000558635 HMOX1P09601 288 aa13.9□□□□□ -0.18
PSMA4-207ENST00000558635 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
PSMA4-207ENST00000558635 MEGF6O75095 1541 aa13.9□□□□□ -0.19
PSMA4-207ENST00000558635 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
PSMA4-207ENST00000558635 KDRP35968 1356 aa13.88□□□□□ -0.19
PSMA4-207ENST00000558635 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
PSMA4-207ENST00000558635 U2AF1L5P0DN76 240 aaPredicted RBP13.88□□□□□ -0.19
PSMA4-207ENST00000558635 U2AF1Q01081 240 aaKnown RBP eCLIP13.88□□□□□ -0.19
PSMA4-207ENST00000558635 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
PSMA4-207ENST00000558635 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
PSMA4-207ENST00000558635 OVOS2A0A0G2JMS6 1433 aa13.88□□□□□ -0.19
PSMA4-207ENST00000558635 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
PSMA4-207ENST00000558635 WNK3Q9BYP7 1800 aa13.86□□□□□ -0.19
PSMA4-207ENST00000558635 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
PSMA4-207ENST00000558635 DDX54Q8TDD1 881 aaKnown RBP13.86□□□□□ -0.19
PSMA4-207ENST00000558635 TNS2Q63HR2 1409 aa13.86□□□□□ -0.19
PSMA4-207ENST00000558635 PARP4Q9UKK3 1724 aaKnown RBP13.86□□□□□ -0.19
PSMA4-207ENST00000558635 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
PSMA4-207ENST00000558635 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
PSMA4-207ENST00000558635 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
PSMA4-207ENST00000558635 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
PSMA4-207ENST00000558635 FCHSD2O94868 740 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 WDR43Q15061 677 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSMA4-207ENST00000558635 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
PSMA4-207ENST00000558635 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 MRS2Q9HD23 443 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSMA4-207ENST00000558635 BRWD3Q6RI45 1802 aa13.84□□□□□ -0.19
PSMA4-207ENST00000558635 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
PSMA4-207ENST00000558635 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
PSMA4-207ENST00000558635 CYP27B1O15528 508 aa13.82□□□□□ -0.2
PSMA4-207ENST00000558635 FAM196AQ6ZSG2 479 aa13.82□□□□□ -0.2
PSMA4-207ENST00000558635 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms