RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 CCDC113Q9H0I3 377 aa18.55■□□□□ 0.56
SHISA9-203ENST00000558583 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
SHISA9-203ENST00000558583 ZNF396Q96N95 335 aaPredicted RBP18.55■□□□□ 0.56
SHISA9-203ENST00000558583 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
SHISA9-203ENST00000558583 IDH1O75874 414 aaKnown RBP18.55■□□□□ 0.56
SHISA9-203ENST00000558583 CCDC192P0DO97 292 aa18.54■□□□□ 0.56
SHISA9-203ENST00000558583 CABP1Q9NZU7 370 aa18.54■□□□□ 0.56
SHISA9-203ENST00000558583 KIF7Q2M1P5 1343 aa18.54■□□□□ 0.56
SHISA9-203ENST00000558583 DDX11Q96FC9 970 aa18.53■□□□□ 0.56
SHISA9-203ENST00000558583 LRRCC1Q9C099 1032 aa18.53■□□□□ 0.56
SHISA9-203ENST00000558583 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
SHISA9-203ENST00000558583 GOLGA6L10A0A0M3HER8 536 aa18.53■□□□□ 0.56
SHISA9-203ENST00000558583 STARD3NLO95772 234 aa18.52■□□□□ 0.56
SHISA9-203ENST00000558583 CCDC96Q2M329 555 aa18.52■□□□□ 0.56
SHISA9-203ENST00000558583 SYCE3A1L190 88 aa18.52■□□□□ 0.56
SHISA9-203ENST00000558583 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
SHISA9-203ENST00000558583 MIS18AQ9NYP9 233 aa18.52■□□□□ 0.56
SHISA9-203ENST00000558583 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
SHISA9-203ENST00000558583 C6orf229H3BNL8 230 aa18.52■□□□□ 0.55
SHISA9-203ENST00000558583 POLR3GO15318 223 aaPredicted RBP18.52■□□□□ 0.55
SHISA9-203ENST00000558583 MBD3O95983 291 aa18.52■□□□□ 0.55
SHISA9-203ENST00000558583 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
SHISA9-203ENST00000558583 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
SHISA9-203ENST00000558583 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
SHISA9-203ENST00000558583 CCP110O43303 1012 aa18.51■□□□□ 0.55
SHISA9-203ENST00000558583 ZRSR2Q15696 482 aaKnown RBP18.51■□□□□ 0.55
SHISA9-203ENST00000558583 BCCIPQ9P287 314 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHISA9-203ENST00000558583 UBAP1LF5GYI3 381 aa18.51■□□□□ 0.55
SHISA9-203ENST00000558583 TRIM21P19474 475 aaKnown RBP18.51■□□□□ 0.55
SHISA9-203ENST00000558583 LARP6Q9BRS8 491 aaKnown RBP18.51■□□□□ 0.55
SHISA9-203ENST00000558583 GPATCH11Q8N954 259 aa18.5■□□□□ 0.55
SHISA9-203ENST00000558583 PPP4R3AQ6IN85 833 aa18.5■□□□□ 0.55
SHISA9-203ENST00000558583 CYP46A1Q9Y6A2 500 aa18.5■□□□□ 0.55
SHISA9-203ENST00000558583 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
SHISA9-203ENST00000558583 METTL24Q5JXM2 366 aa18.5■□□□□ 0.55
SHISA9-203ENST00000558583 KIAA1328Q86T90 577 aa18.5■□□□□ 0.55
SHISA9-203ENST00000558583 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
SHISA9-203ENST00000558583 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
SHISA9-203ENST00000558583 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 AACSQ86V21 672 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 TCP11L2Q8N4U5 519 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 C8orf37Q96NL8 207 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 SPATA32Q96LK8 384 aa18.49■□□□□ 0.55
SHISA9-203ENST00000558583 UBA5Q9GZZ9 404 aa18.48■□□□□ 0.55
SHISA9-203ENST00000558583 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
SHISA9-203ENST00000558583 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
SHISA9-203ENST00000558583 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
SHISA9-203ENST00000558583 BIN2Q9UBW5 565 aaPredicted RBP18.48■□□□□ 0.55
SHISA9-203ENST00000558583 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
SHISA9-203ENST00000558583 TNNT1P13805 278 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 TNIP1Q15025 636 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 TRIM22Q8IYM9 498 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 GNAI2P04899 355 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 FEZ1Q99689 392 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 DESP17661 470 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 IL1RAPL2Q9NP60 686 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 HMGN5P82970 282 aaKnown RBP18.47■□□□□ 0.55
SHISA9-203ENST00000558583 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 PDCL2Q8N4E4 241 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 DYDC1Q8WWB3 177 aa18.47■□□□□ 0.55
SHISA9-203ENST00000558583 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
SHISA9-203ENST00000558583 ZHX1Q9UKY1 873 aaPredicted RBP18.47■□□□□ 0.55
SHISA9-203ENST00000558583 RBM26Q5T8P6 1007 aaKnown RBP18.47■□□□□ 0.55
SHISA9-203ENST00000558583 RABEP1Q15276 862 aa18.46■□□□□ 0.55
SHISA9-203ENST00000558583 IPO4Q8TEX9 1081 aaKnown RBP18.46■□□□□ 0.55
SHISA9-203ENST00000558583 SERPINA10Q9UK55 444 aa18.46■□□□□ 0.55
SHISA9-203ENST00000558583 TRMT1Q9NXH9 659 aaKnown RBP18.46■□□□□ 0.55
SHISA9-203ENST00000558583 GPTP24298 496 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 GBP2P32456 591 aaPredicted RBP18.45■□□□□ 0.54
SHISA9-203ENST00000558583 FERMT3Q86UX7 667 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 GUCY1B3Q02153 619 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 CCDC7Q96M83 1385 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
SHISA9-203ENST00000558583 GOLGA6L7A0A1B0GV03 622 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 EIF3JO75822 258 aaKnown RBP18.45■□□□□ 0.54
SHISA9-203ENST00000558583 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
SHISA9-203ENST00000558583 RFC4P35249 363 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 GNAI3P08754 354 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 MAP3K9P80192 1104 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 KLHL10Q6JEL2 608 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 CFAP45Q9UL16 551 aa18.45■□□□□ 0.54
SHISA9-203ENST00000558583 POGZQ7Z3K3 1410 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 RTEL1-TNFRSF6BF6WH68 1400 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 PDRG1Q9NUG6 133 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
SHISA9-203ENST00000558583 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 GIMAP7Q8NHV1 300 aa18.44■□□□□ 0.54
SHISA9-203ENST00000558583 AIDAQ96BJ3 306 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 UPF3BQ9BZI7 483 aaKnown RBP18.43■□□□□ 0.54
SHISA9-203ENST00000558583 ERLIN1O75477 346 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
SHISA9-203ENST00000558583 CFAP100Q494V2 611 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 MYD88Q99836 296 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
SHISA9-203ENST00000558583 KRT85P78386 507 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 NUP62CLQ9H1M0 184 aa18.43■□□□□ 0.54
SHISA9-203ENST00000558583 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
SHISA9-203ENST00000558583 UBE4AQ14139 1066 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms