RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
LINC01220-201ENST00000558575 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
LINC01220-201ENST00000558575 FBLN1P23142 703 aa21.33■■□□□ 1.01
LINC01220-201ENST00000558575 ATP10DQ9P241 1426 aa21.32■■□□□ 1
LINC01220-201ENST00000558575 SOX12O15370 315 aa21.32■■□□□ 1
LINC01220-201ENST00000558575 ACSBG1Q96GR2 724 aa21.32■■□□□ 1
LINC01220-201ENST00000558575 CARD10Q9BWT7 1032 aa21.32■■□□□ 1
LINC01220-201ENST00000558575 EXOC5O00471 708 aa21.31■■□□□ 1
LINC01220-201ENST00000558575 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 1
LINC01220-201ENST00000558575 ARHGEF25Q86VW2 580 aa21.31■■□□□ 1
LINC01220-201ENST00000558575 KCNH5Q8NCM2 988 aa21.31■■□□□ 1
LINC01220-201ENST00000558575 COG3Q96JB2 828 aa21.31■■□□□ 1
LINC01220-201ENST00000558575 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
LINC01220-201ENST00000558575 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
LINC01220-201ENST00000558575 LY75O60449 1722 aa21.29■■□□□ 1
LINC01220-201ENST00000558575 NFAT5O94916 1531 aa21.29■■□□□ 1
LINC01220-201ENST00000558575 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
LINC01220-201ENST00000558575 AKT1S1Q96B36 256 aa21.28■■□□□ 1
LINC01220-201ENST00000558575 LTN1O94822 1766 aa21.28■■□□□ 1
LINC01220-201ENST00000558575 USP54Q70EL1 1684 aa21.28■■□□□ 1
LINC01220-201ENST00000558575 HSPA6P17066 643 aa21.27■■□□□ 1
LINC01220-201ENST00000558575 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
LINC01220-201ENST00000558575 PNPLA7Q6ZV29 1317 aa21.27■□□□□ 0.99
LINC01220-201ENST00000558575 CSB-PGBD3P0DP91 1061 aa21.26■□□□□ 0.99
LINC01220-201ENST00000558575 POLD1P28340 1107 aa21.25■□□□□ 0.99
LINC01220-201ENST00000558575 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
LINC01220-201ENST00000558575 DOT1LQ8TEK3 1739 aa21.23■□□□□ 0.99
LINC01220-201ENST00000558575 ADCY9O60503 1353 aa21.23■□□□□ 0.99
LINC01220-201ENST00000558575 GRIN3BO60391 1043 aa21.21■□□□□ 0.99
LINC01220-201ENST00000558575 RRS1Q15050 365 aaKnown RBP21.21■□□□□ 0.99
LINC01220-201ENST00000558575 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
LINC01220-201ENST00000558575 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
LINC01220-201ENST00000558575 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
LINC01220-201ENST00000558575 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
LINC01220-201ENST00000558575 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
LINC01220-201ENST00000558575 IP6K1Q92551 441 aa21.18■□□□□ 0.98
LINC01220-201ENST00000558575 NSD2O96028 1365 aa21.18■□□□□ 0.98
LINC01220-201ENST00000558575 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
LINC01220-201ENST00000558575 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
LINC01220-201ENST00000558575 MORC1Q86VD1 984 aa21.17■□□□□ 0.98
LINC01220-201ENST00000558575 NPC1L1Q9UHC9 1359 aa21.16■□□□□ 0.98
LINC01220-201ENST00000558575 KCNQ4P56696 695 aa21.16■□□□□ 0.98
LINC01220-201ENST00000558575 ZNF526Q8TF50 670 aaPredicted RBP21.16■□□□□ 0.98
LINC01220-201ENST00000558575 POLKQ9UBT6 870 aa21.16■□□□□ 0.98
LINC01220-201ENST00000558575 EMILIN1Q9Y6C2 1016 aa21.16■□□□□ 0.98
LINC01220-201ENST00000558575 HOXC9P31274 260 aa21.15■□□□□ 0.98
LINC01220-201ENST00000558575 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
LINC01220-201ENST00000558575 TAF1LQ8IZX4 1826 aa21.13■□□□□ 0.97
LINC01220-201ENST00000558575 C5P01031 1676 aa21.13■□□□□ 0.97
LINC01220-201ENST00000558575 AMPHP49418 695 aa21.13■□□□□ 0.97
LINC01220-201ENST00000558575 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
LINC01220-201ENST00000558575 TFCP2L1Q9NZI6 479 aa21.13■□□□□ 0.97
LINC01220-201ENST00000558575 ERBB3P21860 1342 aa21.12■□□□□ 0.97
LINC01220-201ENST00000558575 IL2RBP14784 551 aa21.12■□□□□ 0.97
LINC01220-201ENST00000558575 HSP90AB2PQ58FF8 381 aa21.12■□□□□ 0.97
LINC01220-201ENST00000558575 RGPD2P0DJD1 1756 aa21.1■□□□□ 0.97
LINC01220-201ENST00000558575 WDR90Q96KV7 1748 aa21.1■□□□□ 0.97
LINC01220-201ENST00000558575 FAM208AQ9UK61 1670 aaKnown RBP21.1■□□□□ 0.97
LINC01220-201ENST00000558575 ANKRD24Q8TF21 1146 aa21.1■□□□□ 0.97
LINC01220-201ENST00000558575 NLRP2Q9NX02 1062 aa21.1■□□□□ 0.97
LINC01220-201ENST00000558575 ANKRD26Q9UPS8 1709 aa21.09■□□□□ 0.97
LINC01220-201ENST00000558575 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
LINC01220-201ENST00000558575 KIF3CO14782 793 aa21.07■□□□□ 0.96
LINC01220-201ENST00000558575 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
LINC01220-201ENST00000558575 MSL1Q68DK7 614 aa21.07■□□□□ 0.96
LINC01220-201ENST00000558575 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
LINC01220-201ENST00000558575 RTL1A6NKG5 1358 aa21.07■□□□□ 0.96
LINC01220-201ENST00000558575 KIF24Q5T7B8 1368 aa21.07■□□□□ 0.96
LINC01220-201ENST00000558575 INSRP06213 1382 aa21.06■□□□□ 0.96
LINC01220-201ENST00000558575 FLT4P35916 1363 aa21.06■□□□□ 0.96
LINC01220-201ENST00000558575 TOGARAM1Q9Y4F4 1720 aa21.05■□□□□ 0.96
LINC01220-201ENST00000558575 DNAJC5GQ8N7S2 189 aa21.04■□□□□ 0.96
LINC01220-201ENST00000558575 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
LINC01220-201ENST00000558575 MSH5O43196 834 aa21.03■□□□□ 0.96
LINC01220-201ENST00000558575 MTHFSP49914 203 aa21.03■□□□□ 0.96
LINC01220-201ENST00000558575 CICQ96RK0 1608 aaPredicted RBP21.03■□□□□ 0.96
LINC01220-201ENST00000558575 SMG6Q86US8 1419 aaKnown RBP21.03■□□□□ 0.96
LINC01220-201ENST00000558575 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
LINC01220-201ENST00000558575 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
LINC01220-201ENST00000558575 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
LINC01220-201ENST00000558575 UBR3Q6ZT12 1888 aa21.01■□□□□ 0.95
LINC01220-201ENST00000558575 PRIM1P49642 420 aaKnown RBP21.01■□□□□ 0.95
LINC01220-201ENST00000558575 APLP1P51693 650 aa21.01■□□□□ 0.95
LINC01220-201ENST00000558575 DDX54Q8TDD1 881 aaKnown RBP21.01■□□□□ 0.95
LINC01220-201ENST00000558575 SYTL4Q96C24 671 aaPredicted RBP21■□□□□ 0.95
LINC01220-201ENST00000558575 KIAA1551Q9HCM1 1747 aa20.99■□□□□ 0.95
LINC01220-201ENST00000558575 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
LINC01220-201ENST00000558575 EIF4A2Q14240 407 aaKnown RBP20.99■□□□□ 0.95
LINC01220-201ENST00000558575 CCNL1Q9UK58 526 aaPredicted RBP20.99■□□□□ 0.95
LINC01220-201ENST00000558575 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
LINC01220-201ENST00000558575 COL13A1Q5TAT6 717 aaPredicted RBP20.97■□□□□ 0.95
LINC01220-201ENST00000558575 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
LINC01220-201ENST00000558575 N4BP2Q86UW6 1770 aaPredicted RBP20.96■□□□□ 0.95
LINC01220-201ENST00000558575 CAPN15O75808 1086 aa20.96■□□□□ 0.95
LINC01220-201ENST00000558575 USHBP1Q8N6Y0 703 aa20.96■□□□□ 0.95
LINC01220-201ENST00000558575 EYA1Q99502 592 aa20.96■□□□□ 0.95
LINC01220-201ENST00000558575 ITGB4P16144 1822 aa20.95■□□□□ 0.94
LINC01220-201ENST00000558575 KIF13BQ9NQT8 1826 aa20.95■□□□□ 0.94
LINC01220-201ENST00000558575 IL13P35225 146 aa20.95■□□□□ 0.94
LINC01220-201ENST00000558575 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms