RNA–Protein interactions for RNA: ENST00000558552.1

HOMER2-205, Transcript of homer scaffold protein 2, humanhuman

TSL 2

Gene HOMER2, Length 948 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-205ENST00000558552 ZCRB1Q8TBF4 217 aaKnown RBP17.75■□□□□ 0.43
HOMER2-205ENST00000558552 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
HOMER2-205ENST00000558552 SPG7Q9UQ90 795 aa17.75■□□□□ 0.43
HOMER2-205ENST00000558552 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
HOMER2-205ENST00000558552 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
HOMER2-205ENST00000558552 SOCS7O14512 581 aa17.73■□□□□ 0.43
HOMER2-205ENST00000558552 NEFMP07197 916 aa17.73■□□□□ 0.43
HOMER2-205ENST00000558552 HMOX1P09601 288 aa17.73■□□□□ 0.43
HOMER2-205ENST00000558552 U2AF1L5P0DN76 240 aaPredicted RBP17.73■□□□□ 0.43
HOMER2-205ENST00000558552 U2AF1Q01081 240 aaKnown RBP eCLIP17.73■□□□□ 0.43
HOMER2-205ENST00000558552 RGPD1P0DJD0 1748 aa17.72■□□□□ 0.43
HOMER2-205ENST00000558552 PLEKHG2Q9H7P9 1386 aa17.72■□□□□ 0.43
HOMER2-205ENST00000558552 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
HOMER2-205ENST00000558552 KDRP35968 1356 aa17.7■□□□□ 0.42
HOMER2-205ENST00000558552 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
HOMER2-205ENST00000558552 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
HOMER2-205ENST00000558552 PLEKHO1Q53GL0 409 aaPredicted RBP17.7■□□□□ 0.42
HOMER2-205ENST00000558552 MARCH10Q8NA82 808 aaPredicted RBP17.7■□□□□ 0.42
HOMER2-205ENST00000558552 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
HOMER2-205ENST00000558552 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
HOMER2-205ENST00000558552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■■■■□ 24.3
HOMER2-205ENST00000558552 TRIM37O94972 964 aa17.67■□□□□ 0.42
HOMER2-205ENST00000558552 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
HOMER2-205ENST00000558552 CCDC125Q86Z20 511 aa17.67■□□□□ 0.42
HOMER2-205ENST00000558552 UPF1Q92900 1129 aaKnown RBP eCLIP17.67■□□□□ 0.42
HOMER2-205ENST00000558552 SYTL4Q96C24 671 aaPredicted RBP17.67■□□□□ 0.42
HOMER2-205ENST00000558552 EP400Q96L91 3159 aa17.67■□□□□ 0.42
HOMER2-205ENST00000558552 PNNQ9H307 717 aaKnown RBP17.66■□□□□ 0.42
HOMER2-205ENST00000558552 MAPK8IP3Q9UPT6 1336 aa17.66■□□□□ 0.42
HOMER2-205ENST00000558552 SHANK3Q9BYB0 1731 aa17.65■□□□□ 0.42
HOMER2-205ENST00000558552 HSP90AB1P08238 724 aaKnown RBP17.65■□□□□ 0.42
HOMER2-205ENST00000558552 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
HOMER2-205ENST00000558552 BAG6P46379 1132 aa17.65■□□□□ 0.42
HOMER2-205ENST00000558552 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
HOMER2-205ENST00000558552 ACSBG1Q96GR2 724 aa17.65■□□□□ 0.42
HOMER2-205ENST00000558552 BCL9O00512 1426 aa17.64■□□□□ 0.42
HOMER2-205ENST00000558552 DOT1LQ8TEK3 1739 aa17.63■□□□□ 0.41
HOMER2-205ENST00000558552 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
HOMER2-205ENST00000558552 FCHSD2O94868 740 aa17.62■□□□□ 0.41
HOMER2-205ENST00000558552 PHKG2P15735 406 aa17.62■□□□□ 0.41
HOMER2-205ENST00000558552 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
HOMER2-205ENST00000558552 MRS2Q9HD23 443 aa17.62■□□□□ 0.41
HOMER2-205ENST00000558552 CYP27B1O15528 508 aa17.61■□□□□ 0.41
HOMER2-205ENST00000558552 APBA3O96018 575 aa17.61■□□□□ 0.41
HOMER2-205ENST00000558552 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
HOMER2-205ENST00000558552 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
HOMER2-205ENST00000558552 TNS1Q9HBL0 1735 aaKnown RBP17.6■□□□□ 0.41
HOMER2-205ENST00000558552 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
HOMER2-205ENST00000558552 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
HOMER2-205ENST00000558552 DCAF5Q96JK2 942 aa17.58■□□□□ 0.4
HOMER2-205ENST00000558552 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.4
HOMER2-205ENST00000558552 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
HOMER2-205ENST00000558552 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
HOMER2-205ENST00000558552 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
HOMER2-205ENST00000558552 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
HOMER2-205ENST00000558552 TMOD3Q9NYL9 352 aa17.57■□□□□ 0.4
HOMER2-205ENST00000558552 KCNQ2O43526 872 aa17.56■□□□□ 0.4
HOMER2-205ENST00000558552 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
HOMER2-205ENST00000558552 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
HOMER2-205ENST00000558552 CABP4P57796 275 aa17.55■□□□□ 0.4
HOMER2-205ENST00000558552 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
HOMER2-205ENST00000558552 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
HOMER2-205ENST00000558552 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
HOMER2-205ENST00000558552 TOGARAM1Q9Y4F4 1720 aa17.53■□□□□ 0.4
HOMER2-205ENST00000558552 EN1Q05925 392 aaPredicted RBP17.53■□□□□ 0.4
HOMER2-205ENST00000558552 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
HOMER2-205ENST00000558552 BTAF1O14981 1849 aa17.53■□□□□ 0.4
HOMER2-205ENST00000558552 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
HOMER2-205ENST00000558552 ERVV-2B6SEH9 535 aa17.52■□□□□ 0.4
HOMER2-205ENST00000558552 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
HOMER2-205ENST00000558552 TEFQ10587 303 aa17.51■□□□□ 0.39
HOMER2-205ENST00000558552 ADAMTS8Q9UP79 889 aa17.51■□□□□ 0.39
HOMER2-205ENST00000558552 RGPD3A6NKT7 1758 aaPredicted RBP17.51■□□□□ 0.39
HOMER2-205ENST00000558552 RGPD4Q7Z3J3 1758 aa17.51■□□□□ 0.39
HOMER2-205ENST00000558552 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
HOMER2-205ENST00000558552 PTF1AQ7RTS3 328 aa17.5■□□□□ 0.39
HOMER2-205ENST00000558552 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
HOMER2-205ENST00000558552 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
HOMER2-205ENST00000558552 RNMTO43148 476 aaKnown RBP17.49■□□□□ 0.39
HOMER2-205ENST00000558552 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
HOMER2-205ENST00000558552 NFE2L2Q16236 605 aa17.49■□□□□ 0.39
HOMER2-205ENST00000558552 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
HOMER2-205ENST00000558552 PLSCR1O15162 318 aa17.48■□□□□ 0.39
HOMER2-205ENST00000558552 CCDC184Q52MB2 194 aa17.48■□□□□ 0.39
HOMER2-205ENST00000558552 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
HOMER2-205ENST00000558552 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
HOMER2-205ENST00000558552 ITGB4P16144 1822 aa17.47■□□□□ 0.39
HOMER2-205ENST00000558552 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
HOMER2-205ENST00000558552 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
HOMER2-205ENST00000558552 PIGBQ92521 554 aa17.47■□□□□ 0.39
HOMER2-205ENST00000558552 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
HOMER2-205ENST00000558552 MRC1P22897 1456 aa17.46■□□□□ 0.39
HOMER2-205ENST00000558552 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
HOMER2-205ENST00000558552 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
HOMER2-205ENST00000558552 CAMKK2Q96RR4 588 aa17.46■□□□□ 0.39
HOMER2-205ENST00000558552 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
HOMER2-205ENST00000558552 RIPK4P57078 832 aa17.45■□□□□ 0.38
HOMER2-205ENST00000558552 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
HOMER2-205ENST00000558552 NBPF14Q5TI25 921 aa17.45■□□□□ 0.38
HOMER2-205ENST00000558552 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms