RNA–Protein interactions for RNA: ENST00000558431.1

SEMA6D-209, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-209ENST00000558431 CARD11Q9BXL7 1154 aa13.78□□□□□ -0.2
SEMA6D-209ENST00000558431 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
SEMA6D-209ENST00000558431 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
SEMA6D-209ENST00000558431 USP6P35125 1406 aa13.77□□□□□ -0.21
SEMA6D-209ENST00000558431 BLMP54132 1417 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-209ENST00000558431 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-209ENST00000558431 BRD4O60885 1362 aaPredicted RBP13.76□□□□□ -0.21
SEMA6D-209ENST00000558431 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
SEMA6D-209ENST00000558431 USP19O94966 1318 aa13.75□□□□□ -0.21
SEMA6D-209ENST00000558431 GCP02774 474 aa13.75□□□□□ -0.21
SEMA6D-209ENST00000558431 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
SEMA6D-209ENST00000558431 SPATA31A1Q5TZJ5 1347 aa13.74□□□□□ -0.21
SEMA6D-209ENST00000558431 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
SEMA6D-209ENST00000558431 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
SEMA6D-209ENST00000558431 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
SEMA6D-209ENST00000558431 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
SEMA6D-209ENST00000558431 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
SEMA6D-209ENST00000558431 CPDO75976 1380 aa13.73□□□□□ -0.21
SEMA6D-209ENST00000558431 LMO7Q8WWI1 1683 aa13.73□□□□□ -0.21
SEMA6D-209ENST00000558431 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
SEMA6D-209ENST00000558431 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
SEMA6D-209ENST00000558431 LARP1Q6PKG0 1096 aaKnown RBP13.72□□□□□ -0.21
SEMA6D-209ENST00000558431 RGPD5Q99666 1765 aa13.72□□□□□ -0.21
SEMA6D-209ENST00000558431 MON2Q7Z3U7 1717 aa13.72□□□□□ -0.21
SEMA6D-209ENST00000558431 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
SEMA6D-209ENST00000558431 TTC21BQ7Z4L5 1316 aa13.71□□□□□ -0.21
SEMA6D-209ENST00000558431 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
SEMA6D-209ENST00000558431 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
SEMA6D-209ENST00000558431 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.22
SEMA6D-209ENST00000558431 SLIT3O75094 1523 aa13.7□□□□□ -0.22
SEMA6D-209ENST00000558431 BAG6P46379 1132 aa13.7□□□□□ -0.22
SEMA6D-209ENST00000558431 PPP1R37O75864 691 aa13.69□□□□□ -0.22
SEMA6D-209ENST00000558431 TCP11L2Q8N4U5 519 aa13.69□□□□□ -0.22
SEMA6D-209ENST00000558431 RYDENQ9NUL5 291 aaKnown RBP13.69□□□□□ -0.22
SEMA6D-209ENST00000558431 COL5A2P05997 1499 aaPredicted RBP13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 TTC21AQ8NDW8 1320 aa13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 SNPHO15079 494 aa13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 COL18A1P39060 1754 aa13.68□□□□□ -0.22
SEMA6D-209ENST00000558431 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
SEMA6D-209ENST00000558431 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
SEMA6D-209ENST00000558431 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
SEMA6D-209ENST00000558431 AATKQ6ZMQ8 1374 aa13.67□□□□□ -0.22
SEMA6D-209ENST00000558431 TNS1Q9HBL0 1735 aaKnown RBP13.67□□□□□ -0.22
SEMA6D-209ENST00000558431 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
SEMA6D-209ENST00000558431 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
SEMA6D-209ENST00000558431 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
SEMA6D-209ENST00000558431 CRB1P82279 1406 aa13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 PARP4Q9UKK3 1724 aaKnown RBP13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 TRIM37O94972 964 aa13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 LTN1O94822 1766 aa13.65□□□□□ -0.22
SEMA6D-209ENST00000558431 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
SEMA6D-209ENST00000558431 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
SEMA6D-209ENST00000558431 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
SEMA6D-209ENST00000558431 TERF2IPQ9NYB0 399 aa13.64□□□□□ -0.23
SEMA6D-209ENST00000558431 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
SEMA6D-209ENST00000558431 NME9Q86XW9 330 aa13.63□□□□□ -0.23
SEMA6D-209ENST00000558431 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
SEMA6D-209ENST00000558431 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
SEMA6D-209ENST00000558431 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
SEMA6D-209ENST00000558431 NFAT5O94916 1531 aa13.62□□□□□ -0.23
SEMA6D-209ENST00000558431 USP54Q70EL1 1684 aa13.62□□□□□ -0.23
SEMA6D-209ENST00000558431 WDR17Q8IZU2 1322 aa13.62□□□□□ -0.23
SEMA6D-209ENST00000558431 APBA3O96018 575 aa13.61□□□□□ -0.23
SEMA6D-209ENST00000558431 TMEM92Q6UXU6 159 aa13.61□□□□□ -0.23
SEMA6D-209ENST00000558431 EDC4Q6P2E9 1401 aaKnown RBP13.61□□□□□ -0.23
SEMA6D-209ENST00000558431 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
SEMA6D-209ENST00000558431 A0A1W2PP64 1363 aa13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 TESK2Q96S53 571 aa13.6□□□□□ -0.23
SEMA6D-209ENST00000558431 USP31Q70CQ4 1352 aa13.59□□□□□ -0.23
SEMA6D-209ENST00000558431 USP47Q96K76 1375 aa13.59□□□□□ -0.23
SEMA6D-209ENST00000558431 DDB1Q16531 1140 aa13.59□□□□□ -0.23
SEMA6D-209ENST00000558431 DISP2A7MBM2 1401 aa13.58□□□□□ -0.24
SEMA6D-209ENST00000558431 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
SEMA6D-209ENST00000558431 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
SEMA6D-209ENST00000558431 TMF1P82094 1093 aa13.57□□□□□ -0.24
SEMA6D-209ENST00000558431 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
SEMA6D-209ENST00000558431 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
SEMA6D-209ENST00000558431 ABCC6O95255 1503 aa13.57□□□□□ -0.24
SEMA6D-209ENST00000558431 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 CAMKK2Q96RR4 588 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 NLRP2Q9NX02 1062 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
SEMA6D-209ENST00000558431 ST18O60284 1047 aa13.55□□□□□ -0.24
SEMA6D-209ENST00000558431 R3HDM1Q15032 1099 aaKnown RBP13.55□□□□□ -0.24
SEMA6D-209ENST00000558431 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms