RNA–Protein interactions for RNA: ENST00000558406.5

MRPS11-204, Transcript of mitochondrial ribosomal protein S11, humanhuman

TSL 2

Gene MRPS11, Length 918 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS11-204ENST00000558406 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
MRPS11-204ENST00000558406 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
MRPS11-204ENST00000558406 CHD4Q14839 1912 aa17.62■□□□□ 0.41
MRPS11-204ENST00000558406 COL24A1Q17RW2 1714 aa17.61■□□□□ 0.41
MRPS11-204ENST00000558406 HOXC9P31274 260 aa17.61■□□□□ 0.41
MRPS11-204ENST00000558406 CGNL1Q0VF96 1302 aa17.61■□□□□ 0.41
MRPS11-204ENST00000558406 HMGB2P26583 209 aaKnown RBP17.6■□□□□ 0.41
MRPS11-204ENST00000558406 POLD1P28340 1107 aa17.6■□□□□ 0.41
MRPS11-204ENST00000558406 AMPHP49418 695 aa17.59■□□□□ 0.41
MRPS11-204ENST00000558406 LTV1Q96GA3 475 aaPredicted RBP17.59■□□□□ 0.41
MRPS11-204ENST00000558406 NSD2O96028 1365 aa17.58■□□□□ 0.4
MRPS11-204ENST00000558406 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
MRPS11-204ENST00000558406 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
MRPS11-204ENST00000558406 ZCRB1Q8TBF4 217 aaKnown RBP17.58■□□□□ 0.4
MRPS11-204ENST00000558406 LY75O60449 1722 aa17.58■□□□□ 0.4
MRPS11-204ENST00000558406 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.4
MRPS11-204ENST00000558406 GOLGB1Q14789 3259 aaKnown RBP17.57■□□□□ 0.4
MRPS11-204ENST00000558406 PRIM1P49642 420 aaKnown RBP17.57■□□□□ 0.4
MRPS11-204ENST00000558406 TFCP2L1Q9NZI6 479 aa17.57■□□□□ 0.4
MRPS11-204ENST00000558406 MEGF6O75095 1541 aa17.57■□□□□ 0.4
MRPS11-204ENST00000558406 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
MRPS11-204ENST00000558406 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
MRPS11-204ENST00000558406 C1QTNF8P60827 252 aa17.56■□□□□ 0.4
MRPS11-204ENST00000558406 SYTL4Q96C24 671 aaPredicted RBP17.56■□□□□ 0.4
MRPS11-204ENST00000558406 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
MRPS11-204ENST00000558406 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
MRPS11-204ENST00000558406 KCNQ4P56696 695 aa17.54■□□□□ 0.4
MRPS11-204ENST00000558406 GPR162Q16538 588 aa17.54■□□□□ 0.4
MRPS11-204ENST00000558406 USP47Q96K76 1375 aa17.53■□□□□ 0.4
MRPS11-204ENST00000558406 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
MRPS11-204ENST00000558406 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
MRPS11-204ENST00000558406 FYB1O15117 783 aa17.52■□□□□ 0.4
MRPS11-204ENST00000558406 TMF1P82094 1093 aa17.52■□□□□ 0.4
MRPS11-204ENST00000558406 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
MRPS11-204ENST00000558406 INSRP06213 1382 aa17.52■□□□□ 0.39
MRPS11-204ENST00000558406 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
MRPS11-204ENST00000558406 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
MRPS11-204ENST00000558406 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
MRPS11-204ENST00000558406 RGPD2P0DJD1 1756 aa17.51■□□□□ 0.39
MRPS11-204ENST00000558406 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
MRPS11-204ENST00000558406 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
MRPS11-204ENST00000558406 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
MRPS11-204ENST00000558406 NLGN2Q8NFZ4 835 aa17.5■□□□□ 0.39
MRPS11-204ENST00000558406 FLT4P35916 1363 aa17.5■□□□□ 0.39
MRPS11-204ENST00000558406 TATP17735 454 aaPredicted RBP17.49■□□□□ 0.39
MRPS11-204ENST00000558406 FBLN1P23142 703 aa17.49■□□□□ 0.39
MRPS11-204ENST00000558406 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
MRPS11-204ENST00000558406 FLAD1Q8NFF5 587 aa17.48■□□□□ 0.39
MRPS11-204ENST00000558406 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
MRPS11-204ENST00000558406 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
MRPS11-204ENST00000558406 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
MRPS11-204ENST00000558406 C5P01031 1676 aa17.46■□□□□ 0.39
MRPS11-204ENST00000558406 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.39
MRPS11-204ENST00000558406 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
MRPS11-204ENST00000558406 CEP350Q5VT06 3117 aa17.45■□□□□ 0.38
MRPS11-204ENST00000558406 COL23A1Q86Y22 540 aaPredicted RBP17.45■□□□□ 0.38
MRPS11-204ENST00000558406 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
MRPS11-204ENST00000558406 HSP90AB2PQ58FF8 381 aa17.44■□□□□ 0.38
MRPS11-204ENST00000558406 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
MRPS11-204ENST00000558406 NCAPD2Q15021 1401 aa17.44■□□□□ 0.38
MRPS11-204ENST00000558406 GIGYF1O75420 1035 aaPredicted RBP17.43■□□□□ 0.38
MRPS11-204ENST00000558406 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
MRPS11-204ENST00000558406 SMARCC1Q92922 1105 aaPredicted RBP17.43■□□□□ 0.38
MRPS11-204ENST00000558406 CD2APQ9Y5K6 639 aa17.43■□□□□ 0.38
MRPS11-204ENST00000558406 NSD3Q9BZ95 1437 aa17.43■□□□□ 0.38
MRPS11-204ENST00000558406 PKD1L3Q7Z443 1732 aa17.42■□□□□ 0.38
MRPS11-204ENST00000558406 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
MRPS11-204ENST00000558406 TAF1LQ8IZX4 1826 aa17.4■□□□□ 0.38
MRPS11-204ENST00000558406 CYP27B1O15528 508 aa17.4■□□□□ 0.38
MRPS11-204ENST00000558406 NKX1-1Q15270 411 aaPredicted RBP17.4■□□□□ 0.38
MRPS11-204ENST00000558406 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
MRPS11-204ENST00000558406 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
MRPS11-204ENST00000558406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
MRPS11-204ENST00000558406 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
MRPS11-204ENST00000558406 AK7Q96M32 723 aa17.38■□□□□ 0.37
MRPS11-204ENST00000558406 SPG7Q9UQ90 795 aa17.38■□□□□ 0.37
MRPS11-204ENST00000558406 TOGARAM1Q9Y4F4 1720 aa17.38■□□□□ 0.37
MRPS11-204ENST00000558406 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
MRPS11-204ENST00000558406 CARD14Q9BXL6 1004 aa17.37■□□□□ 0.37
MRPS11-204ENST00000558406 WASHC2AQ641Q2 1341 aa17.37■□□□□ 0.37
MRPS11-204ENST00000558406 ITGB4P16144 1822 aa17.36■□□□□ 0.37
MRPS11-204ENST00000558406 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
MRPS11-204ENST00000558406 EMILIN1Q9Y6C2 1016 aa17.36■□□□□ 0.37
MRPS11-204ENST00000558406 SSFA2P28290 1259 aa17.35■□□□□ 0.37
MRPS11-204ENST00000558406 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
MRPS11-204ENST00000558406 PIGBQ92521 554 aa17.35■□□□□ 0.37
MRPS11-204ENST00000558406 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
MRPS11-204ENST00000558406 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.37
MRPS11-204ENST00000558406 ADCY9O60503 1353 aa17.33■□□□□ 0.36
MRPS11-204ENST00000558406 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.36
MRPS11-204ENST00000558406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
MRPS11-204ENST00000558406 LOC102724428A0A0B4J2F2 783 aa17.32■□□□□ 0.36
MRPS11-204ENST00000558406 SIK1P57059 783 aa17.32■□□□□ 0.36
MRPS11-204ENST00000558406 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
MRPS11-204ENST00000558406 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
MRPS11-204ENST00000558406 IFNL2Q8IZJ0 200 aa17.31■□□□□ 0.36
MRPS11-204ENST00000558406 EYA1Q99502 592 aa17.31■□□□□ 0.36
MRPS11-204ENST00000558406 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
MRPS11-204ENST00000558406 PHKG2P15735 406 aa17.29■□□□□ 0.36
MRPS11-204ENST00000558406 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms