RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 SNRPBP14678 240 aaKnown RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 INSM1Q01101 510 aaPredicted RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 HDGFL1Q5TGJ6 251 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 CDCA7Q9BWT1 371 aaPredicted RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 SMG1Q96Q15 3661 aaKnown RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 FAM83GA6ND36 823 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 MOXD2PA6NHM9 499 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 ATP5J2-PTCD1G3V325 749 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 JUNDP17535 347 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 KCNMA1Q12791 1236 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 LYPD8Q6UX82 237 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 RNF135Q8IUD6 432 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 EPS8L1Q8TE68 723 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 GLMNQ92990 594 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 IQSEC3Q9UPP2 1182 aaPredicted RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 PTPRNQ16849 979 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 SIX5Q8N196 739 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 SNRKQ9NRH2 765 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 CFHP08603 1231 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 GGCXP38435 758 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 COPS2P61201 443 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 ARHGAP4P98171 946 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 PDXDC2PQ6P474 469 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 TRMT44Q8IYL2 757 aaKnown RBP2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 ZBBXA8MT70 800 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 ATP9BO43861 1147 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 ARID4AP29374 1257 aaPredicted RBP2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 MSS51Q4VC12 460 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 PRR7Q8TB68 274 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 NDUFV2P19404 249 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 QPCTQ16769 361 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 SLFNL1Q499Z3 407 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 GDPD2Q9HCC8 539 aa2.21□□□□□ -2.06
CTDSPL2-202ENST00000558373 UNC13AQ9UPW8 1703 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 EML3Q32P44 896 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 RTL5Q5HYW3 569 aaPredicted RBP2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 KRTAP17-1Q9BYP8 105 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 KRTAP9-2Q9BYQ4 174 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 PPP1R12CQ9BZL4 782 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 ATP13A2Q9NQ11 1180 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 NEFLP07196 543 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 USB1Q9BQ65 265 aaKnown RBP2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 RFX1P22670 979 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 AEBP1Q8IUX7 1158 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 GAS2L2Q8NHY3 880 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 H3BM21 787 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 HOXD8P13378 290 aaPredicted RBP2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 CSPP1Q1MSJ5 1256 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM200AQ8TCP9 573 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 TSC1Q92574 1164 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 KLRG1Q96E93 195 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 FKBPLQ9UIM3 349 aa2.2□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM187AA6NFU0 413 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 MORN1Q5T089 497 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 STAG2Q8N3U4 1231 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 NOD1Q9Y239 953 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 EP400Q96L91 3159 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 ANK3Q12955 4377 aaKnown RBP2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 M0R2N6 131 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 WNT7AO00755 349 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 LMOD1P29536 600 aaPredicted RBP2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 COL19A1Q14993 1142 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 MTFR1Q15390 333 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 SEPT12Q8IYM1 358 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 CABLES1Q8TDN4 633 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 PCDHB3Q9Y5E6 796 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 E9PSI1 815 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 TNFRSF10AO00220 468 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 MYCP01106 439 aaPredicted RBP2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 KCNH2Q12809 1159 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 EGFL7Q9UHF1 273 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 TBC1D2BQ9UPU7 963 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 CHMP3Q9Y3E7 222 aa2.19□□□□□ -2.06
CTDSPL2-202ENST00000558373 KRTAP9-6A0A140TA67 174 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 PTCD1O75127 700 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 GMPRP36959 345 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 VEGFBP49765 207 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 SWI5Q1ZZU3 235 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 CYB5RLQ6IPT4 315 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 ZBTB33Q86T24 672 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 DZIP3Q86Y13 1208 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 SLC4A9Q96Q91 983 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 GZF1Q9H116 711 aaPredicted RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 ERBB4Q15303 1308 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 PALM3A6NDB9 673 aaPredicted RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 POM121CA8CG34 1229 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 TNFRSF10BO14763 440 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 DXOO77932 396 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 HMGB1P09429 215 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 CCNYL3P0C7X3 344 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 CTDSPL2Q05D32 466 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 BRICD5Q6PL45 260 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 LARGE2Q8N3Y3 721 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 FAM196BA6NMK8 535 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 CEBPAP49715 358 aaPredicted RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 DHX9Q08211 1270 aaKnown RBP2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 USP4Q13107 963 aa2.18□□□□□ -2.06
CTDSPL2-202ENST00000558373 SCUBE3Q8IX30 993 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms