RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 RAPGEF4Q8WZA2 1011 aa16.44■□□□□ 0.22
HERC1-202ENST00000558324 BTAF1O14981 1849 aa16.43■□□□□ 0.22
HERC1-202ENST00000558324 SHANK3Q9BYB0 1731 aa16.43■□□□□ 0.22
HERC1-202ENST00000558324 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
HERC1-202ENST00000558324 PANK3Q9H999 370 aa16.43■□□□□ 0.22
HERC1-202ENST00000558324 DOT1LQ8TEK3 1739 aa16.42■□□□□ 0.22
HERC1-202ENST00000558324 TATP17735 454 aaPredicted RBP16.41■□□□□ 0.22
HERC1-202ENST00000558324 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
HERC1-202ENST00000558324 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
HERC1-202ENST00000558324 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
HERC1-202ENST00000558324 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
HERC1-202ENST00000558324 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
HERC1-202ENST00000558324 SPON1Q9HCB6 807 aa16.38■□□□□ 0.21
HERC1-202ENST00000558324 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
HERC1-202ENST00000558324 CASZ1Q86V15 1759 aa16.37■□□□□ 0.21
HERC1-202ENST00000558324 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
HERC1-202ENST00000558324 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
HERC1-202ENST00000558324 PCDH11XQ9BZA7 1347 aa16.37■□□□□ 0.21
HERC1-202ENST00000558324 PCDH11YQ9BZA8 1340 aa16.37■□□□□ 0.21
HERC1-202ENST00000558324 NSD2O96028 1365 aa16.37■□□□□ 0.21
HERC1-202ENST00000558324 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
HERC1-202ENST00000558324 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
HERC1-202ENST00000558324 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
HERC1-202ENST00000558324 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
HERC1-202ENST00000558324 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
HERC1-202ENST00000558324 KCNQ4P56696 695 aa16.35■□□□□ 0.21
HERC1-202ENST00000558324 LRRC4BQ9NT99 713 aa16.35■□□□□ 0.21
HERC1-202ENST00000558324 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
HERC1-202ENST00000558324 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
HERC1-202ENST00000558324 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
HERC1-202ENST00000558324 EYA1Q99502 592 aa16.34■□□□□ 0.21
HERC1-202ENST00000558324 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
HERC1-202ENST00000558324 NCAPD2Q15021 1401 aa16.34■□□□□ 0.21
HERC1-202ENST00000558324 CYP27B1O15528 508 aa16.33■□□□□ 0.2
HERC1-202ENST00000558324 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
HERC1-202ENST00000558324 PKD1L3Q7Z443 1732 aa16.32■□□□□ 0.2
HERC1-202ENST00000558324 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
HERC1-202ENST00000558324 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
HERC1-202ENST00000558324 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
HERC1-202ENST00000558324 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
HERC1-202ENST00000558324 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
HERC1-202ENST00000558324 LY75O60449 1722 aa16.28■□□□□ 0.2
HERC1-202ENST00000558324 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
HERC1-202ENST00000558324 MTFR1LQ9H019 292 aa16.28■□□□□ 0.2
HERC1-202ENST00000558324 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
HERC1-202ENST00000558324 PTGER2P43116 358 aa16.27■□□□□ 0.2
HERC1-202ENST00000558324 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
HERC1-202ENST00000558324 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
HERC1-202ENST00000558324 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
HERC1-202ENST00000558324 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
HERC1-202ENST00000558324 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
HERC1-202ENST00000558324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
HERC1-202ENST00000558324 PNPLA7Q6ZV29 1317 aa16.24■□□□□ 0.19
HERC1-202ENST00000558324 PHKG2P15735 406 aa16.24■□□□□ 0.19
HERC1-202ENST00000558324 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
HERC1-202ENST00000558324 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
HERC1-202ENST00000558324 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
HERC1-202ENST00000558324 PIGBQ92521 554 aa16.23■□□□□ 0.19
HERC1-202ENST00000558324 ITGB4P16144 1822 aa16.23■□□□□ 0.19
HERC1-202ENST00000558324 TUBGCP6Q96RT7 1819 aa16.23■□□□□ 0.19
HERC1-202ENST00000558324 C5P01031 1676 aa16.22■□□□□ 0.19
HERC1-202ENST00000558324 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
HERC1-202ENST00000558324 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
HERC1-202ENST00000558324 MSH5O43196 834 aa16.21■□□□□ 0.19
HERC1-202ENST00000558324 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
HERC1-202ENST00000558324 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
HERC1-202ENST00000558324 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
HERC1-202ENST00000558324 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
HERC1-202ENST00000558324 MTHFSP49914 203 aa16.2■□□□□ 0.18
HERC1-202ENST00000558324 PLEKHO1Q53GL0 409 aaPredicted RBP16.2■□□□□ 0.18
HERC1-202ENST00000558324 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
HERC1-202ENST00000558324 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
HERC1-202ENST00000558324 IL13P35225 146 aa16.19■□□□□ 0.18
HERC1-202ENST00000558324 ARXQ96QS3 562 aa16.19■□□□□ 0.18
HERC1-202ENST00000558324 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
HERC1-202ENST00000558324 KLHL34Q8N239 644 aa16.18■□□□□ 0.18
HERC1-202ENST00000558324 SLC16A10Q8TF71 515 aa16.18■□□□□ 0.18
HERC1-202ENST00000558324 ASAP1Q9ULH1 1129 aa16.18■□□□□ 0.18
HERC1-202ENST00000558324 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
HERC1-202ENST00000558324 POLD1P28340 1107 aa16.17■□□□□ 0.18
HERC1-202ENST00000558324 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
HERC1-202ENST00000558324 COL23A1Q86Y22 540 aaPredicted RBP16.17■□□□□ 0.18
HERC1-202ENST00000558324 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
HERC1-202ENST00000558324 KDM6AO15550 1401 aaPredicted RBP16.17■□□□□ 0.18
HERC1-202ENST00000558324 C4BP0C0L5 1744 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
HERC1-202ENST00000558324 SIK1P57059 783 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 C1orf141Q5JVX7 400 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 DCAF5Q96JK2 942 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 AK7Q96M32 723 aa16.16■□□□□ 0.18
HERC1-202ENST00000558324 KDRP35968 1356 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 PHF14O94880 888 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 HMOX1P09601 288 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
HERC1-202ENST00000558324 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
HERC1-202ENST00000558324 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms