RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
TRPM1-206ENST00000558212 TMEM259Q4ZIN3 620 aa10.33□□□□□ -0.76
TRPM1-206ENST00000558212 PROSER2Q86WR7 435 aaPredicted RBP10.33□□□□□ -0.76
TRPM1-206ENST00000558212 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
TRPM1-206ENST00000558212 MSH6P52701 1360 aa10.33□□□□□ -0.76
TRPM1-206ENST00000558212 KDM5AP29375 1690 aaKnown RBP10.33□□□□□ -0.76
TRPM1-206ENST00000558212 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
TRPM1-206ENST00000558212 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
TRPM1-206ENST00000558212 HDGFP51858 240 aaKnown RBP10.32□□□□□ -0.76
TRPM1-206ENST00000558212 SLAIN2Q9P270 581 aa10.32□□□□□ -0.76
TRPM1-206ENST00000558212 PIK3C2BO00750 1634 aa10.32□□□□□ -0.76
TRPM1-206ENST00000558212 LRP6O75581 1613 aa10.32□□□□□ -0.76
TRPM1-206ENST00000558212 TET3O43151 1660 aa10.31□□□□□ -0.76
TRPM1-206ENST00000558212 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
TRPM1-206ENST00000558212 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
TRPM1-206ENST00000558212 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
TRPM1-206ENST00000558212 EFCAB6Q5THR3 1501 aa10.31□□□□□ -0.76
TRPM1-206ENST00000558212 CLUAP1Q96AJ1 413 aa10.3□□□□□ -0.76
TRPM1-206ENST00000558212 SHPRHQ149N8 1683 aa10.29□□□□□ -0.76
TRPM1-206ENST00000558212 FDX1P10109 184 aa10.29□□□□□ -0.76
TRPM1-206ENST00000558212 RXRBP28702 533 aa10.29□□□□□ -0.76
TRPM1-206ENST00000558212 SLC4A3P48751 1232 aa10.29□□□□□ -0.76
TRPM1-206ENST00000558212 MRPL50Q8N5N7 158 aaKnown RBP10.29□□□□□ -0.76
TRPM1-206ENST00000558212 DUOX2Q9NRD8 1548 aa10.28□□□□□ -0.76
TRPM1-206ENST00000558212 CFHP08603 1231 aa10.28□□□□□ -0.76
TRPM1-206ENST00000558212 HRCP23327 699 aa10.28□□□□□ -0.76
TRPM1-206ENST00000558212 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
TRPM1-206ENST00000558212 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
TRPM1-206ENST00000558212 HLA-CQ95604 372 aa10.28□□□□□ -0.76
TRPM1-206ENST00000558212 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
TRPM1-206ENST00000558212 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
TRPM1-206ENST00000558212 NCOA3Q9Y6Q9 1424 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 FUT2Q10981 343 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 CSPP1Q1MSJ5 1256 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 MTMR14Q8NCE2 650 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 SLC26A8Q96RN1 970 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
TRPM1-206ENST00000558212 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
TRPM1-206ENST00000558212 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
TRPM1-206ENST00000558212 ERBINQ96RT1 1412 aa10.25□□□□□ -0.77
TRPM1-206ENST00000558212 TRAK2O60296 914 aa10.25□□□□□ -0.77
TRPM1-206ENST00000558212 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
TRPM1-206ENST00000558212 POM121Q96HA1 1249 aa10.25□□□□□ -0.77
TRPM1-206ENST00000558212 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
TRPM1-206ENST00000558212 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
TRPM1-206ENST00000558212 ADGRB3O60242 1522 aa10.24□□□□□ -0.77
TRPM1-206ENST00000558212 ATP6V1AP38606 617 aa10.24□□□□□ -0.77
TRPM1-206ENST00000558212 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
TRPM1-206ENST00000558212 LRCH3Q96II8 777 aa10.24□□□□□ -0.77
TRPM1-206ENST00000558212 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
TRPM1-206ENST00000558212 MTMR2Q13614 643 aa10.23□□□□□ -0.77
TRPM1-206ENST00000558212 IDI1Q13907 227 aa10.23□□□□□ -0.77
TRPM1-206ENST00000558212 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
TRPM1-206ENST00000558212 KANK1Q14678 1352 aa10.23□□□□□ -0.77
TRPM1-206ENST00000558212 LMTK2Q8IWU2 1503 aa10.23□□□□□ -0.77
TRPM1-206ENST00000558212 KIF15Q9NS87 1388 aa10.22□□□□□ -0.77
TRPM1-206ENST00000558212 PLEKHG1Q9ULL1 1385 aa10.22□□□□□ -0.77
TRPM1-206ENST00000558212 RGS12O14924 1447 aa10.22□□□□□ -0.77
TRPM1-206ENST00000558212 MYOM3Q5VTT5 1437 aa10.22□□□□□ -0.77
TRPM1-206ENST00000558212 DIP2AQ14689 1571 aa10.22□□□□□ -0.77
TRPM1-206ENST00000558212 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
TRPM1-206ENST00000558212 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
TRPM1-206ENST00000558212 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
TRPM1-206ENST00000558212 MORN1Q5T089 497 aa10.21□□□□□ -0.77
TRPM1-206ENST00000558212 AFF2P51816 1311 aa10.21□□□□□ -0.78
TRPM1-206ENST00000558212 NOS1P29475 1434 aa10.21□□□□□ -0.78
TRPM1-206ENST00000558212 NUTM2BA6NNL0 878 aaPredicted RBP10.2□□□□□ -0.78
TRPM1-206ENST00000558212 NUTM2EB1AL46 878 aaPredicted RBP10.2□□□□□ -0.78
TRPM1-206ENST00000558212 ZFYVE9O95405 1425 aa10.2□□□□□ -0.78
TRPM1-206ENST00000558212 NUTM2DQ5VT03 806 aaPredicted RBP10.2□□□□□ -0.78
TRPM1-206ENST00000558212 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
TRPM1-206ENST00000558212 KRTAP3-3Q9BYR6 98 aa10.2□□□□□ -0.78
TRPM1-206ENST00000558212 KRTAP3-2Q9BYR7 98 aa10.2□□□□□ -0.78
TRPM1-206ENST00000558212 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.2□□□□□ -0.78
TRPM1-206ENST00000558212 RNF40O75150 1001 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 AP1G2O75843 785 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 ATF3P18847 181 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
TRPM1-206ENST00000558212 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
TRPM1-206ENST00000558212 C19orf44Q9H6X5 657 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
TRPM1-206ENST00000558212 SETD5Q9C0A6 1442 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 CFAP99D6REC4 459 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 RAD21O60216 631 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 PRR14Q9BWN1 585 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 TBX22Q9Y458 520 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 CROCC2H7BZ55 1655 aa10.18□□□□□ -0.78
TRPM1-206ENST00000558212 DCCP43146 1447 aa10.17□□□□□ -0.78
TRPM1-206ENST00000558212 PIK3R4Q99570 1358 aa10.17□□□□□ -0.78
TRPM1-206ENST00000558212 PPP1R15AO75807 674 aaPredicted RBP10.17□□□□□ -0.78
TRPM1-206ENST00000558212 BRINP3Q76B58 766 aa10.17□□□□□ -0.78
TRPM1-206ENST00000558212 QTRT2Q9H974 415 aaKnown RBP10.17□□□□□ -0.78
TRPM1-206ENST00000558212 RIMS2Q9UQ26 1411 aa10.16□□□□□ -0.78
TRPM1-206ENST00000558212 APBB1O00213 710 aa10.16□□□□□ -0.78
TRPM1-206ENST00000558212 GPR37L1O60883 481 aa10.16□□□□□ -0.78
TRPM1-206ENST00000558212 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
TRPM1-206ENST00000558212 SLC27A5Q9Y2P5 690 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms