RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
TGFB3-207ENST00000557493 USP19O94966 1318 aa14.07□□□□□ -0.16
TGFB3-207ENST00000557493 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
TGFB3-207ENST00000557493 RRS1Q15050 365 aaKnown RBP14.06□□□□□ -0.16
TGFB3-207ENST00000557493 PDGFDQ9GZP0 370 aaPredicted RBP14.06□□□□□ -0.16
TGFB3-207ENST00000557493 CASZ1Q86V15 1759 aa14.06□□□□□ -0.16
TGFB3-207ENST00000557493 NUTM2GQ5VZR2 741 aa14.05□□□□□ -0.16
TGFB3-207ENST00000557493 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
TGFB3-207ENST00000557493 U2SURPO15042 1029 aaKnown RBP14.04□□□□□ -0.16
TGFB3-207ENST00000557493 SOX12O15370 315 aa14.04□□□□□ -0.16
TGFB3-207ENST00000557493 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-207ENST00000557493 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
TGFB3-207ENST00000557493 NGEFQ8N5V2 710 aa14.04□□□□□ -0.16
TGFB3-207ENST00000557493 PNNQ9H307 717 aaKnown RBP14.04□□□□□ -0.16
TGFB3-207ENST00000557493 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
TGFB3-207ENST00000557493 CEP350Q5VT06 3117 aa14.04□□□□□ -0.16
TGFB3-207ENST00000557493 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
TGFB3-207ENST00000557493 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
TGFB3-207ENST00000557493 FBLN1P23142 703 aa14.03□□□□□ -0.16
TGFB3-207ENST00000557493 CPDO75976 1380 aa14.03□□□□□ -0.16
TGFB3-207ENST00000557493 ABCC6O95255 1503 aa14.02□□□□□ -0.16
TGFB3-207ENST00000557493 AMPHP49418 695 aa14.02□□□□□ -0.17
TGFB3-207ENST00000557493 RUNDC1Q96C34 613 aa14.02□□□□□ -0.17
TGFB3-207ENST00000557493 MTFR1LQ9H019 292 aa14.02□□□□□ -0.17
TGFB3-207ENST00000557493 IL13P35225 146 aa14.01□□□□□ -0.17
TGFB3-207ENST00000557493 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
TGFB3-207ENST00000557493 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
TGFB3-207ENST00000557493 SLC15A2Q16348 729 aa14□□□□□ -0.17
TGFB3-207ENST00000557493 DDB1Q16531 1140 aa14□□□□□ -0.17
TGFB3-207ENST00000557493 PROM2Q8N271 834 aa14□□□□□ -0.17
TGFB3-207ENST00000557493 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
TGFB3-207ENST00000557493 CRB1P82279 1406 aa13.99□□□□□ -0.17
TGFB3-207ENST00000557493 GCP02774 474 aa13.99□□□□□ -0.17
TGFB3-207ENST00000557493 NEFMP07197 916 aa13.99□□□□□ -0.17
TGFB3-207ENST00000557493 HOXC9P31274 260 aa13.99□□□□□ -0.17
TGFB3-207ENST00000557493 EIF4A2Q14240 407 aaKnown RBP13.99□□□□□ -0.17
TGFB3-207ENST00000557493 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
TGFB3-207ENST00000557493 ARXQ96QS3 562 aa13.99□□□□□ -0.17
TGFB3-207ENST00000557493 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
TGFB3-207ENST00000557493 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 FCHSD2O94868 740 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 TXNRD1Q16881 649 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 PTF1AQ7RTS3 328 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 SGIP1Q9BQI5 828 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 CHD4Q14839 1912 aa13.98□□□□□ -0.17
TGFB3-207ENST00000557493 APAF1O14727 1248 aa13.97□□□□□ -0.17
TGFB3-207ENST00000557493 GPR162Q16538 588 aa13.97□□□□□ -0.17
TGFB3-207ENST00000557493 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
TGFB3-207ENST00000557493 IP6K1Q92551 441 aa13.97□□□□□ -0.17
TGFB3-207ENST00000557493 ARHGEF25Q86VW2 580 aa13.96□□□□□ -0.17
TGFB3-207ENST00000557493 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
TGFB3-207ENST00000557493 BCL9O00512 1426 aa13.96□□□□□ -0.18
TGFB3-207ENST00000557493 FAM208AQ9UK61 1670 aaKnown RBP13.95□□□□□ -0.18
TGFB3-207ENST00000557493 MSH5O43196 834 aa13.95□□□□□ -0.18
TGFB3-207ENST00000557493 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
TGFB3-207ENST00000557493 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
TGFB3-207ENST00000557493 LRRC37A3O60309 1634 aa13.94□□□□□ -0.18
TGFB3-207ENST00000557493 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
TGFB3-207ENST00000557493 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
TGFB3-207ENST00000557493 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
TGFB3-207ENST00000557493 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
TGFB3-207ENST00000557493 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 ZBTB7CA1YPR0 619 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 HMOX1P09601 288 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 MARCH10Q8NA82 808 aaPredicted RBP13.93□□□□□ -0.18
TGFB3-207ENST00000557493 COL18A1P39060 1754 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 KDRP35968 1356 aa13.93□□□□□ -0.18
TGFB3-207ENST00000557493 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
TGFB3-207ENST00000557493 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
TGFB3-207ENST00000557493 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
TGFB3-207ENST00000557493 SBF2Q86WG5 1849 aa13.91□□□□□ -0.18
TGFB3-207ENST00000557493 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
TGFB3-207ENST00000557493 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
TGFB3-207ENST00000557493 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
TGFB3-207ENST00000557493 NCAPD2Q15021 1401 aa13.9□□□□□ -0.19
TGFB3-207ENST00000557493 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
TGFB3-207ENST00000557493 NFE2L2Q16236 605 aa13.89□□□□□ -0.19
TGFB3-207ENST00000557493 LTV1Q96GA3 475 aaPredicted RBP13.89□□□□□ -0.19
TGFB3-207ENST00000557493 EYA1Q99502 592 aa13.89□□□□□ -0.19
TGFB3-207ENST00000557493 RRP7AQ9Y3A4 280 aaKnown RBP13.89□□□□□ -0.19
TGFB3-207ENST00000557493 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
TGFB3-207ENST00000557493 WDR17Q8IZU2 1322 aa13.89□□□□□ -0.19
TGFB3-207ENST00000557493 E9PSI1 815 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 POLD1P28340 1107 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 WDR63Q8IWG1 891 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 WWC1Q8IX03 1113 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
TGFB3-207ENST00000557493 RGPD2P0DJD1 1756 aa13.87□□□□□ -0.19
TGFB3-207ENST00000557493 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
TGFB3-207ENST00000557493 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
TGFB3-207ENST00000557493 ERBB3P21860 1342 aa13.87□□□□□ -0.19
TGFB3-207ENST00000557493 EXOC5O00471 708 aa13.86□□□□□ -0.19
TGFB3-207ENST00000557493 RIPK4P57078 832 aa13.86□□□□□ -0.19
TGFB3-207ENST00000557493 SHANK3Q9BYB0 1731 aa13.86□□□□□ -0.19
TGFB3-207ENST00000557493 PLEKHG2Q9H7P9 1386 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
TGFB3-207ENST00000557493 CALD1Q05682 793 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms