RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
RTN1-208ENST00000557422 NSD2O96028 1365 aa17.37■□□□□ 0.37
RTN1-208ENST00000557422 EDC4Q6P2E9 1401 aaKnown RBP17.37■□□□□ 0.37
RTN1-208ENST00000557422 LY75O60449 1722 aa17.36■□□□□ 0.37
RTN1-208ENST00000557422 COL23A1Q86Y22 540 aaPredicted RBP17.36■□□□□ 0.37
RTN1-208ENST00000557422 MSH5O43196 834 aa17.35■□□□□ 0.37
RTN1-208ENST00000557422 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
RTN1-208ENST00000557422 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
RTN1-208ENST00000557422 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
RTN1-208ENST00000557422 TERF2IPQ9NYB0 399 aa17.34■□□□□ 0.37
RTN1-208ENST00000557422 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
RTN1-208ENST00000557422 ATP10DQ9P241 1426 aa17.33■□□□□ 0.36
RTN1-208ENST00000557422 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
RTN1-208ENST00000557422 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
RTN1-208ENST00000557422 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
RTN1-208ENST00000557422 CD2APQ9Y5K6 639 aa17.31■□□□□ 0.36
RTN1-208ENST00000557422 USP47Q96K76 1375 aa17.3■□□□□ 0.36
RTN1-208ENST00000557422 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
RTN1-208ENST00000557422 HOXC9P31274 260 aa17.3■□□□□ 0.36
RTN1-208ENST00000557422 FBLN1P23142 703 aa17.29■□□□□ 0.36
RTN1-208ENST00000557422 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
RTN1-208ENST00000557422 GPBP1L1Q9HC44 474 aaPredicted RBP17.29■□□□□ 0.36
RTN1-208ENST00000557422 MEGF6O75095 1541 aa17.29■□□□□ 0.36
RTN1-208ENST00000557422 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
RTN1-208ENST00000557422 AMPHP49418 695 aa17.28■□□□□ 0.36
RTN1-208ENST00000557422 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
RTN1-208ENST00000557422 HSPA6P17066 643 aa17.27■□□□□ 0.36
RTN1-208ENST00000557422 COG3Q96JB2 828 aa17.27■□□□□ 0.36
RTN1-208ENST00000557422 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
RTN1-208ENST00000557422 ADCY9O60503 1353 aa17.26■□□□□ 0.35
RTN1-208ENST00000557422 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
RTN1-208ENST00000557422 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
RTN1-208ENST00000557422 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
RTN1-208ENST00000557422 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
RTN1-208ENST00000557422 C5P01031 1676 aa17.24■□□□□ 0.35
RTN1-208ENST00000557422 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
RTN1-208ENST00000557422 USHBP1Q8N6Y0 703 aa17.23■□□□□ 0.35
RTN1-208ENST00000557422 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
RTN1-208ENST00000557422 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
RTN1-208ENST00000557422 RRS1Q15050 365 aaKnown RBP17.21■□□□□ 0.35
RTN1-208ENST00000557422 TAF1LQ8IZX4 1826 aa17.21■□□□□ 0.35
RTN1-208ENST00000557422 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
RTN1-208ENST00000557422 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
RTN1-208ENST00000557422 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
RTN1-208ENST00000557422 AMIGO3Q86WK7 504 aa17.2■□□□□ 0.34
RTN1-208ENST00000557422 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
RTN1-208ENST00000557422 SMIM5Q71RC9 77 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 AK7Q96M32 723 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 TESK2Q96S53 571 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
RTN1-208ENST00000557422 KIF3CO14782 793 aa17.17■□□□□ 0.34
RTN1-208ENST00000557422 CYP27B1O15528 508 aa17.17■□□□□ 0.34
RTN1-208ENST00000557422 C4BP0C0L5 1744 aa17.17■□□□□ 0.34
RTN1-208ENST00000557422 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
RTN1-208ENST00000557422 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
RTN1-208ENST00000557422 FYB1O15117 783 aa17.16■□□□□ 0.34
RTN1-208ENST00000557422 PHF14O94880 888 aa17.16■□□□□ 0.34
RTN1-208ENST00000557422 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
RTN1-208ENST00000557422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
RTN1-208ENST00000557422 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
RTN1-208ENST00000557422 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
RTN1-208ENST00000557422 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
RTN1-208ENST00000557422 ST20-MTHFSA0A0A6YYL1 179 aa17.14■□□□□ 0.33
RTN1-208ENST00000557422 PIGBQ92521 554 aa17.14■□□□□ 0.33
RTN1-208ENST00000557422 ITGB4P16144 1822 aa17.14■□□□□ 0.33
RTN1-208ENST00000557422 INSRP06213 1382 aa17.14■□□□□ 0.33
RTN1-208ENST00000557422 SSFA2P28290 1259 aa17.13■□□□□ 0.33
RTN1-208ENST00000557422 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
RTN1-208ENST00000557422 SLC24A1O60721 1099 aa17.11■□□□□ 0.33
RTN1-208ENST00000557422 APLP1P51693 650 aa17.11■□□□□ 0.33
RTN1-208ENST00000557422 LINC00116Q8NCU8 138 aa17.11■□□□□ 0.33
RTN1-208ENST00000557422 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
RTN1-208ENST00000557422 SIK1P57059 783 aa17.1■□□□□ 0.33
RTN1-208ENST00000557422 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
RTN1-208ENST00000557422 FLT4P35916 1363 aa17.1■□□□□ 0.33
RTN1-208ENST00000557422 MAP2P11137 1827 aaKnown RBP17.1■□□□□ 0.33
RTN1-208ENST00000557422 DNAJC5GQ8N7S2 189 aa17.09■□□□□ 0.33
RTN1-208ENST00000557422 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
RTN1-208ENST00000557422 CICQ96RK0 1608 aaPredicted RBP17.09■□□□□ 0.33
RTN1-208ENST00000557422 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 GNPATO15228 680 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 TOMM70O94826 608 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 MMP10P09238 476 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 ITPK1Q13572 414 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 ASAP1Q9ULH1 1129 aa17.07■□□□□ 0.32
RTN1-208ENST00000557422 SPG7Q9UQ90 795 aa17.06■□□□□ 0.32
RTN1-208ENST00000557422 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
RTN1-208ENST00000557422 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
RTN1-208ENST00000557422 TGFB2P61812 414 aa17.05■□□□□ 0.32
RTN1-208ENST00000557422 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
RTN1-208ENST00000557422 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
RTN1-208ENST00000557422 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
RTN1-208ENST00000557422 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
RTN1-208ENST00000557422 BCS1LQ9Y276 419 aa17.04■□□□□ 0.32
RTN1-208ENST00000557422 KIF13BQ9NQT8 1826 aa17.04■□□□□ 0.32
RTN1-208ENST00000557422 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
RTN1-208ENST00000557422 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms