RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
VRK1-207ENST00000557352 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
VRK1-207ENST00000557352 ATP5J2-PTCD1G3V325 749 aa9.79□□□□□ -0.84
VRK1-207ENST00000557352 SCTRP47872 440 aa9.79□□□□□ -0.84
VRK1-207ENST00000557352 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
VRK1-207ENST00000557352 ITGA6P23229 1130 aa9.78□□□□□ -0.84
VRK1-207ENST00000557352 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
VRK1-207ENST00000557352 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
VRK1-207ENST00000557352 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
VRK1-207ENST00000557352 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
VRK1-207ENST00000557352 RNF144AP50876 292 aaPredicted RBP9.76□□□□□ -0.85
VRK1-207ENST00000557352 MCM6Q14566 821 aa9.76□□□□□ -0.85
VRK1-207ENST00000557352 RNFT1Q5M7Z0 435 aa9.76□□□□□ -0.85
VRK1-207ENST00000557352 VWA5B2Q8N398 1253 aa9.76□□□□□ -0.85
VRK1-207ENST00000557352 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
VRK1-207ENST00000557352 EIF4G2P78344 907 aaKnown RBP eCLIP9.75□□□□□ -0.85
VRK1-207ENST00000557352 CCDC85AQ96PX6 553 aaPredicted RBP9.75□□□□□ -0.85
VRK1-207ENST00000557352 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
VRK1-207ENST00000557352 MEN1O00255 615 aa9.74□□□□□ -0.85
VRK1-207ENST00000557352 ABL2P42684 1182 aa9.74□□□□□ -0.85
VRK1-207ENST00000557352 VAC14Q08AM6 782 aa9.74□□□□□ -0.85
VRK1-207ENST00000557352 LYSMD3Q7Z3D4 306 aa9.74□□□□□ -0.85
VRK1-207ENST00000557352 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
VRK1-207ENST00000557352 TRAK2O60296 914 aa9.73□□□□□ -0.85
VRK1-207ENST00000557352 CDCA7Q9BWT1 371 aaPredicted RBP9.73□□□□□ -0.85
VRK1-207ENST00000557352 GPC1P35052 558 aa9.72□□□□□ -0.85
VRK1-207ENST00000557352 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
VRK1-207ENST00000557352 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
VRK1-207ENST00000557352 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
VRK1-207ENST00000557352 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
VRK1-207ENST00000557352 CDC14CA4D256 554 aa9.71□□□□□ -0.86
VRK1-207ENST00000557352 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
VRK1-207ENST00000557352 CUEDC1Q9NWM3 386 aaPredicted RBP9.71□□□□□ -0.86
VRK1-207ENST00000557352 RHOQP17081 205 aa9.7□□□□□ -0.86
VRK1-207ENST00000557352 CLN3Q13286 438 aa9.7□□□□□ -0.86
VRK1-207ENST00000557352 WASHC4Q2M389 1173 aa9.7□□□□□ -0.86
VRK1-207ENST00000557352 NLRP3Q96P20 1036 aa9.7□□□□□ -0.86
VRK1-207ENST00000557352 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
VRK1-207ENST00000557352 SLFNL1Q499Z3 407 aa9.69□□□□□ -0.86
VRK1-207ENST00000557352 MYCP01106 439 aaPredicted RBP9.68□□□□□ -0.86
VRK1-207ENST00000557352 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
VRK1-207ENST00000557352 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
VRK1-207ENST00000557352 GNRH1P01148 92 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
VRK1-207ENST00000557352 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 GRIP2Q9C0E4 1043 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 CHIC2Q9UKJ5 165 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
VRK1-207ENST00000557352 GSK3AP49840 483 aa9.66□□□□□ -0.86
VRK1-207ENST00000557352 WHAMMQ8TF30 809 aa9.66□□□□□ -0.86
VRK1-207ENST00000557352 POU4F2Q12837 409 aa9.65□□□□□ -0.86
VRK1-207ENST00000557352 USP4Q13107 963 aa9.65□□□□□ -0.86
VRK1-207ENST00000557352 SEMA3FQ13275 785 aa9.65□□□□□ -0.86
VRK1-207ENST00000557352 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
VRK1-207ENST00000557352 ADAMTS8Q9UP79 889 aa9.65□□□□□ -0.86
VRK1-207ENST00000557352 IL2RAP01589 272 aa9.64□□□□□ -0.87
VRK1-207ENST00000557352 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
VRK1-207ENST00000557352 GAS6Q14393 721 aa9.64□□□□□ -0.87
VRK1-207ENST00000557352 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
VRK1-207ENST00000557352 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
VRK1-207ENST00000557352 SOX11P35716 441 aa9.63□□□□□ -0.87
VRK1-207ENST00000557352 OXLD1Q5BKU9 147 aa9.63□□□□□ -0.87
VRK1-207ENST00000557352 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
VRK1-207ENST00000557352 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
VRK1-207ENST00000557352 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
VRK1-207ENST00000557352 CENPCQ03188 943 aa9.62□□□□□ -0.87
VRK1-207ENST00000557352 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
VRK1-207ENST00000557352 TRIM22Q8IYM9 498 aa9.62□□□□□ -0.87
VRK1-207ENST00000557352 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
VRK1-207ENST00000557352 XAGE2Q96GT9 111 aa9.62□□□□□ -0.87
VRK1-207ENST00000557352 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
VRK1-207ENST00000557352 DBN1Q16643 649 aa9.61□□□□□ -0.87
VRK1-207ENST00000557352 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
VRK1-207ENST00000557352 SVOPQ8N4V2 548 aa9.61□□□□□ -0.87
VRK1-207ENST00000557352 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
VRK1-207ENST00000557352 ADAMTS2O95450 1211 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 FLIIQ13045 1269 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 MAP7D1Q3KQU3 841 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 TAS1R3Q7RTX0 852 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 PLPP7Q8NBV4 271 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 SIRT1Q96EB6 747 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 GMCL1Q96IK5 515 aa9.6□□□□□ -0.87
VRK1-207ENST00000557352 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
VRK1-207ENST00000557352 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
VRK1-207ENST00000557352 SRSF11Q05519 484 aaKnown RBP9.59□□□□□ -0.87
VRK1-207ENST00000557352 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
VRK1-207ENST00000557352 RIPOR1Q6ZS17 1223 aa9.59□□□□□ -0.87
VRK1-207ENST00000557352 GAS2L1Q99501 681 aaPredicted RBP9.59□□□□□ -0.87
VRK1-207ENST00000557352 FHDC1Q9C0D6 1143 aaPredicted RBP9.59□□□□□ -0.87
VRK1-207ENST00000557352 LYPD4Q6UWN0 246 aa9.58□□□□□ -0.88
VRK1-207ENST00000557352 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
VRK1-207ENST00000557352 ALG2Q9H553 416 aa9.58□□□□□ -0.88
VRK1-207ENST00000557352 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
VRK1-207ENST00000557352 TIMMDC1Q9NPL8 285 aa9.58□□□□□ -0.88
VRK1-207ENST00000557352 GPR25O00155 361 aa9.57□□□□□ -0.88
VRK1-207ENST00000557352 PIK3CDO00329 1044 aa9.57□□□□□ -0.88
VRK1-207ENST00000557352 RAD21O60216 631 aa9.57□□□□□ -0.88
VRK1-207ENST00000557352 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 191.2 ms