RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.52□□□□□ -0.73
LINC00640-204ENST00000557295 CHD2O14647 1828 aaKnown RBP10.51□□□□□ -0.73
LINC00640-204ENST00000557295 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
LINC00640-204ENST00000557295 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
LINC00640-204ENST00000557295 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
LINC00640-204ENST00000557295 USP21Q9UK80 565 aa10.51□□□□□ -0.73
LINC00640-204ENST00000557295 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
LINC00640-204ENST00000557295 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
LINC00640-204ENST00000557295 PSEN2P49810 448 aa10.5□□□□□ -0.73
LINC00640-204ENST00000557295 NUDT18Q6ZVK8 323 aa10.5□□□□□ -0.73
LINC00640-204ENST00000557295 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
LINC00640-204ENST00000557295 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
LINC00640-204ENST00000557295 CHIC2Q9UKJ5 165 aa10.5□□□□□ -0.73
LINC00640-204ENST00000557295 TMEM131LA2VDJ0 1609 aa10.5□□□□□ -0.73
LINC00640-204ENST00000557295 TRPM2O94759 1503 aa10.49□□□□□ -0.73
LINC00640-204ENST00000557295 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
LINC00640-204ENST00000557295 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
LINC00640-204ENST00000557295 ATRNO75882 1429 aa10.49□□□□□ -0.73
LINC00640-204ENST00000557295 PTCH1Q13635 1447 aa10.49□□□□□ -0.73
LINC00640-204ENST00000557295 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
LINC00640-204ENST00000557295 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
LINC00640-204ENST00000557295 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
LINC00640-204ENST00000557295 RCCD1A6NED2 376 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 TATDN2Q93075 761 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 ANKRD50Q9ULJ7 1429 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 ADGRL2O95490 1459 aa10.47□□□□□ -0.73
LINC00640-204ENST00000557295 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.73
LINC00640-204ENST00000557295 TK2O00142 265 aa10.46□□□□□ -0.73
LINC00640-204ENST00000557295 DNAJB2P25686 324 aa10.46□□□□□ -0.73
LINC00640-204ENST00000557295 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
LINC00640-204ENST00000557295 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
LINC00640-204ENST00000557295 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.74
LINC00640-204ENST00000557295 PTPN23Q9H3S7 1636 aa10.45□□□□□ -0.74
LINC00640-204ENST00000557295 BLMP54132 1417 aaPredicted RBP10.45□□□□□ -0.74
LINC00640-204ENST00000557295 METP08581 1390 aa10.45□□□□□ -0.74
LINC00640-204ENST00000557295 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
LINC00640-204ENST00000557295 DIXDC1Q155Q3 683 aa10.45□□□□□ -0.74
LINC00640-204ENST00000557295 EP400Q96L91 3159 aa10.45□□□□□ -0.74
LINC00640-204ENST00000557295 C1orf167Q5SNV9 1468 aa10.44□□□□□ -0.74
LINC00640-204ENST00000557295 BCL9LQ86UU0 1499 aa10.44□□□□□ -0.74
LINC00640-204ENST00000557295 PROX2Q3B8N5 592 aa10.44□□□□□ -0.74
LINC00640-204ENST00000557295 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
LINC00640-204ENST00000557295 GJD4Q96KN9 370 aaPredicted RBP10.43□□□□□ -0.74
LINC00640-204ENST00000557295 EYA1Q99502 592 aa10.43□□□□□ -0.74
LINC00640-204ENST00000557295 KIAA1468Q9P260 1216 aa10.43□□□□□ -0.74
LINC00640-204ENST00000557295 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
LINC00640-204ENST00000557295 XRN1Q8IZH2 1706 aaKnown RBP10.42□□□□□ -0.74
LINC00640-204ENST00000557295 HRO43593 1189 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 ONECUT3O60422 494 aaPredicted RBP10.42□□□□□ -0.74
LINC00640-204ENST00000557295 SH3D19Q5HYK7 790 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 UNC13BO14795 1591 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 MYOM2P54296 1465 aa10.42□□□□□ -0.74
LINC00640-204ENST00000557295 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
LINC00640-204ENST00000557295 SMAPO00193 183 aa10.41□□□□□ -0.74
LINC00640-204ENST00000557295 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
LINC00640-204ENST00000557295 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
LINC00640-204ENST00000557295 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
LINC00640-204ENST00000557295 LAMC1P11047 1609 aa10.4□□□□□ -0.74
LINC00640-204ENST00000557295 DEFB132Q7Z7B7 95 aa10.39□□□□□ -0.75
LINC00640-204ENST00000557295 FLIIQ13045 1269 aa10.38□□□□□ -0.75
LINC00640-204ENST00000557295 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
LINC00640-204ENST00000557295 ZBED2Q9BTP6 218 aa10.38□□□□□ -0.75
LINC00640-204ENST00000557295 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 LRP5O75197 1615 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 PRAG1Q86YV5 1406 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 UNC5CLQ8IV45 518 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 STAC3Q96MF2 364 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 TBC1D2Q9BYX2 928 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 VPS9D1Q9Y2B5 631 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
LINC00640-204ENST00000557295 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
LINC00640-204ENST00000557295 HRCP23327 699 aa10.36□□□□□ -0.75
LINC00640-204ENST00000557295 SLC4A5Q9BY07 1137 aa10.36□□□□□ -0.75
LINC00640-204ENST00000557295 RABGEF1Q9UJ41 708 aa10.36□□□□□ -0.75
LINC00640-204ENST00000557295 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
LINC00640-204ENST00000557295 FAM50AQ14320 339 aaKnown RBP10.35□□□□□ -0.75
LINC00640-204ENST00000557295 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
LINC00640-204ENST00000557295 NUP155O75694 1391 aa10.35□□□□□ -0.75
LINC00640-204ENST00000557295 SLIT2O94813 1529 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 CLK2P49760 499 aaKnown RBP10.34□□□□□ -0.75
LINC00640-204ENST00000557295 MYSM1Q5VVJ2 828 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 SEPT12Q8IYM1 358 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 SEPT9Q9UHD8 586 aaPredicted RBP10.34□□□□□ -0.75
LINC00640-204ENST00000557295 ROCK1Q13464 1354 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 PXDNQ92626 1479 aa10.34□□□□□ -0.75
LINC00640-204ENST00000557295 MYO5BQ9ULV0 1848 aa10.33□□□□□ -0.76
LINC00640-204ENST00000557295 C3orf80F5H4A9 247 aa10.33□□□□□ -0.76
LINC00640-204ENST00000557295 RNF40O75150 1001 aa10.33□□□□□ -0.76
LINC00640-204ENST00000557295 ESCO1Q5FWF5 840 aa10.33□□□□□ -0.76
LINC00640-204ENST00000557295 IQGAP3Q86VI3 1631 aa10.33□□□□□ -0.76
LINC00640-204ENST00000557295 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms