RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 NUCB2P80303 420 aa15.54■□□□□ 0.08
APEX1-216ENST00000557159 PLEKHF1Q96S99 279 aa15.54■□□□□ 0.08
APEX1-216ENST00000557159 NALCNQ8IZF0 1738 aa15.53■□□□□ 0.08
APEX1-216ENST00000557159 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
APEX1-216ENST00000557159 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
APEX1-216ENST00000557159 BAG4O95429 457 aaKnown RBP15.53■□□□□ 0.08
APEX1-216ENST00000557159 RIPK4P57078 832 aa15.53■□□□□ 0.08
APEX1-216ENST00000557159 CSPP1Q1MSJ5 1256 aa15.53■□□□□ 0.08
APEX1-216ENST00000557159 MSH6P52701 1360 aa15.53■□□□□ 0.08
APEX1-216ENST00000557159 ANKRD26Q9UPS8 1709 aa15.53■□□□□ 0.08
APEX1-216ENST00000557159 CYP2E1P05181 493 aaPredicted RBP15.52■□□□□ 0.08
APEX1-216ENST00000557159 EXOSC9Q06265 439 aaKnown RBP15.52■□□□□ 0.08
APEX1-216ENST00000557159 TMEM57Q8N5G2 664 aa15.52■□□□□ 0.08
APEX1-216ENST00000557159 DCCP43146 1447 aa15.52■□□□□ 0.08
APEX1-216ENST00000557159 TMPOP42166 694 aaKnown RBP15.51■□□□□ 0.07
APEX1-216ENST00000557159 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
APEX1-216ENST00000557159 ARHGAP45Q92619 1136 aa15.51■□□□□ 0.07
APEX1-216ENST00000557159 NOB1Q9ULX3 412 aaKnown RBP15.51■□□□□ 0.07
APEX1-216ENST00000557159 DDX49Q9Y6V7 483 aaKnown RBP15.51■□□□□ 0.07
APEX1-216ENST00000557159 ATP7BP35670 1465 aa15.51■□□□□ 0.07
APEX1-216ENST00000557159 ATF3P18847 181 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 TNNT2P45379 298 aaPredicted RBP15.5■□□□□ 0.07
APEX1-216ENST00000557159 RABEP1Q15276 862 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 CWC22Q9HCG8 908 aaKnown RBP15.5■□□□□ 0.07
APEX1-216ENST00000557159 TRIM35Q9UPQ4 493 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 CDC42BPGQ6DT37 1551 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 DYNC1I1O14576 645 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 FYB1O15117 783 aa15.5■□□□□ 0.07
APEX1-216ENST00000557159 U2AF1L5P0DN76 240 aaPredicted RBP15.5■□□□□ 0.07
APEX1-216ENST00000557159 U2AF1Q01081 240 aaKnown RBP eCLIP15.5■□□□□ 0.07
APEX1-216ENST00000557159 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
APEX1-216ENST00000557159 SSFA2P28290 1259 aa15.49■□□□□ 0.07
APEX1-216ENST00000557159 CD2BP2O95400 341 aaKnown RBP15.48■□□□□ 0.07
APEX1-216ENST00000557159 TBC1D9Q6ZT07 1266 aa15.48■□□□□ 0.07
APEX1-216ENST00000557159 CDC45O75419 566 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 GAS2L2Q8NHY3 880 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 TSR2Q969E8 191 aaKnown RBP15.47■□□□□ 0.07
APEX1-216ENST00000557159 LNPKQ9C0E8 428 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 CABP1Q9NZU7 370 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 PRDM4Q9UKN5 801 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 ZKSCAN5Q9Y2L8 839 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
APEX1-216ENST00000557159 LMBRD1Q9NUN5 540 aa15.47■□□□□ 0.07
APEX1-216ENST00000557159 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
APEX1-216ENST00000557159 ZSCAN23Q3MJ62 389 aa15.46■□□□□ 0.07
APEX1-216ENST00000557159 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
APEX1-216ENST00000557159 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.06
APEX1-216ENST00000557159 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.45■□□□□ 0.06
APEX1-216ENST00000557159 KIF20BQ96Q89 1820 aa15.45■□□□□ 0.06
APEX1-216ENST00000557159 MST1RQ04912 1400 aa15.45■□□□□ 0.06
APEX1-216ENST00000557159 ZBTB7BO15156 539 aaPredicted RBP15.45■□□□□ 0.06
APEX1-216ENST00000557159 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
APEX1-216ENST00000557159 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
APEX1-216ENST00000557159 PNPLA6Q8IY17 1366 aa15.44■□□□□ 0.06
APEX1-216ENST00000557159 ANKARQ7Z5J8 1434 aa15.44■□□□□ 0.06
APEX1-216ENST00000557159 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
APEX1-216ENST00000557159 FMN2Q9NZ56 1722 aa15.44■□□□□ 0.06
APEX1-216ENST00000557159 C1orf167Q5SNV9 1468 aa15.44■□□□□ 0.06
APEX1-216ENST00000557159 TOM1O60784 492 aa15.43■□□□□ 0.06
APEX1-216ENST00000557159 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
APEX1-216ENST00000557159 CPSF1Q10570 1443 aaKnown RBP15.42■□□□□ 0.06
APEX1-216ENST00000557159 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
APEX1-216ENST00000557159 SASS6Q6UVJ0 657 aa15.42■□□□□ 0.06
APEX1-216ENST00000557159 DIAPH1O60610 1272 aaKnown RBP15.41■□□□□ 0.06
APEX1-216ENST00000557159 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
APEX1-216ENST00000557159 LRSAM1Q6UWE0 723 aa15.41■□□□□ 0.06
APEX1-216ENST00000557159 RBSNQ9H1K0 784 aa15.41■□□□□ 0.06
APEX1-216ENST00000557159 R3HCC1Q9Y3T6 440 aaKnown RBP15.41■□□□□ 0.06
APEX1-216ENST00000557159 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
APEX1-216ENST00000557159 ESCO1Q5FWF5 840 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 ORAI2Q96SN7 254 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 ABCC4O15439 1325 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 UQCRHLA0A096LP55 91 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 UBAP1LF5GYI3 381 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 UQCRHP07919 91 aa15.4■□□□□ 0.06
APEX1-216ENST00000557159 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
APEX1-216ENST00000557159 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
APEX1-216ENST00000557159 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
APEX1-216ENST00000557159 FCHSD2O94868 740 aa15.39■□□□□ 0.05
APEX1-216ENST00000557159 MBD3O95983 291 aa15.39■□□□□ 0.05
APEX1-216ENST00000557159 MCTP1Q6DN14 999 aa15.39■□□□□ 0.05
APEX1-216ENST00000557159 UTP14CQ5TAP6 766 aaKnown RBP15.38■□□□□ 0.05
APEX1-216ENST00000557159 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
APEX1-216ENST00000557159 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
APEX1-216ENST00000557159 USP26Q9BXU7 913 aa15.38■□□□□ 0.05
APEX1-216ENST00000557159 MED1Q15648 1581 aaPredicted RBP15.38■□□□□ 0.05
APEX1-216ENST00000557159 PRIM1P49642 420 aaKnown RBP15.38■□□□□ 0.05
APEX1-216ENST00000557159 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
APEX1-216ENST00000557159 AATKQ6ZMQ8 1374 aa15.37■□□□□ 0.05
APEX1-216ENST00000557159 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
APEX1-216ENST00000557159 MRPL50Q8N5N7 158 aaKnown RBP15.37■□□□□ 0.05
APEX1-216ENST00000557159 ST18O60284 1047 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
APEX1-216ENST00000557159 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 TOPAZ1Q8N9V7 1692 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 PLEKHM2Q8IWE5 1019 aa15.36■□□□□ 0.05
APEX1-216ENST00000557159 GPT2Q8TD30 523 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms