RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 MAP2P11137 1827 aaKnown RBP31.22■■■□□ 2.59
TMEM260-214ENST00000556975 USHBP1Q8N6Y0 703 aa31.22■■■□□ 2.59
TMEM260-214ENST00000556975 RAPGEF4Q8WZA2 1011 aa31.22■■■□□ 2.59
TMEM260-214ENST00000556975 ANO8Q9HCE9 1232 aaPredicted RBP31.21■■■□□ 2.59
TMEM260-214ENST00000556975 POLKQ9UBT6 870 aa31.21■■■□□ 2.59
TMEM260-214ENST00000556975 SHANK3Q9BYB0 1731 aa31.2■■■□□ 2.58
TMEM260-214ENST00000556975 BTAF1O14981 1849 aa31.19■■■□□ 2.58
TMEM260-214ENST00000556975 PPM1GO15355 546 aaPredicted RBP31.18■■■□□ 2.58
TMEM260-214ENST00000556975 TATP17735 454 aaPredicted RBP31.18■■■□□ 2.58
TMEM260-214ENST00000556975 NSD2O96028 1365 aa31.17■■■□□ 2.58
TMEM260-214ENST00000556975 NCAPD2Q15021 1401 aa31.16■■■□□ 2.58
TMEM260-214ENST00000556975 PRIM1P49642 420 aaKnown RBP31.13■■■□□ 2.57
TMEM260-214ENST00000556975 SLC15A2Q16348 729 aa31.12■■■□□ 2.57
TMEM260-214ENST00000556975 STK32BQ9NY57 414 aa31.12■■■□□ 2.57
TMEM260-214ENST00000556975 KIF7Q2M1P5 1343 aa31.11■■■□□ 2.57
TMEM260-214ENST00000556975 TNNT2P45379 298 aaPredicted RBP31.1■■■□□ 2.57
TMEM260-214ENST00000556975 EYA1Q99502 592 aa31.1■■■□□ 2.57
TMEM260-214ENST00000556975 SPON1Q9HCB6 807 aa31.1■■■□□ 2.57
TMEM260-214ENST00000556975 PCDH11XQ9BZA7 1347 aa31.09■■■□□ 2.57
TMEM260-214ENST00000556975 PCDH11YQ9BZA8 1340 aa31.09■■■□□ 2.57
TMEM260-214ENST00000556975 DOT1LQ8TEK3 1739 aa31.09■■■□□ 2.57
TMEM260-214ENST00000556975 SYTL4Q96C24 671 aaPredicted RBP31.08■■■□□ 2.57
TMEM260-214ENST00000556975 KNSTRNQ9Y448 316 aa31.08■■■□□ 2.57
TMEM260-214ENST00000556975 CASZ1Q86V15 1759 aa31.07■■■□□ 2.56
TMEM260-214ENST00000556975 SLC27A3Q5K4L6 730 aa31.07■■■□□ 2.56
TMEM260-214ENST00000556975 LRRC4BQ9NT99 713 aa31.07■■■□□ 2.56
TMEM260-214ENST00000556975 PAPPAQ13219 1627 aa31.06■■■□□ 2.56
TMEM260-214ENST00000556975 CYP27B1O15528 508 aa31.05■■■□□ 2.56
TMEM260-214ENST00000556975 EIF4A2Q14240 407 aaKnown RBP31.05■■■□□ 2.56
TMEM260-214ENST00000556975 PDGFDQ9GZP0 370 aaPredicted RBP31.05■■■□□ 2.56
TMEM260-214ENST00000556975 MORC1Q86VD1 984 aa31.04■■■□□ 2.56
TMEM260-214ENST00000556975 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.03■■■□□ 2.56
TMEM260-214ENST00000556975 PPP1R1BQ9UD71 204 aaPredicted RBP31.03■■■□□ 2.56
TMEM260-214ENST00000556975 PKD1L3Q7Z443 1732 aa31.03■■■□□ 2.56
TMEM260-214ENST00000556975 AMER1Q5JTC6 1135 aaPredicted RBP31.01■■■□□ 2.55
TMEM260-214ENST00000556975 SPG7Q9UQ90 795 aa31.01■■■□□ 2.55
TMEM260-214ENST00000556975 NKX1-1Q15270 411 aaPredicted RBP31■■■□□ 2.55
TMEM260-214ENST00000556975 LY75O60449 1722 aa30.99■■■□□ 2.55
TMEM260-214ENST00000556975 PLEKHG2Q9H7P9 1386 aa30.98■■■□□ 2.55
TMEM260-214ENST00000556975 PER1O15534 1290 aaPredicted RBP30.98■■■□□ 2.55
TMEM260-214ENST00000556975 ZNF827Q17R98 1081 aa30.97■■■□□ 2.55
TMEM260-214ENST00000556975 AKT1S1Q96B36 256 aa30.97■■■□□ 2.55
TMEM260-214ENST00000556975 IGSF1Q8N6C5 1336 aa30.97■■■□□ 2.55
TMEM260-214ENST00000556975 ZBTB7AO95365 584 aa30.95■■■□□ 2.55
TMEM260-214ENST00000556975 MTFR1LQ9H019 292 aa30.93■■■□□ 2.54
TMEM260-214ENST00000556975 PTGER2P43116 358 aa30.92■■■□□ 2.54
TMEM260-214ENST00000556975 KCNQ4P56696 695 aa30.91■■■□□ 2.54
TMEM260-214ENST00000556975 MPRIPQ6WCQ1 1025 aa30.91■■■□□ 2.54
TMEM260-214ENST00000556975 IFNL2Q8IZJ0 200 aa30.91■■■□□ 2.54
TMEM260-214ENST00000556975 CCNL1Q9UK58 526 aaPredicted RBP30.91■■■□□ 2.54
TMEM260-214ENST00000556975 TOGARAM1Q9Y4F4 1720 aa30.9■■■□□ 2.54
TMEM260-214ENST00000556975 ATF5Q9Y2D1 282 aaPredicted RBP30.9■■■□□ 2.54
TMEM260-214ENST00000556975 PHKG2P15735 406 aa30.89■■■□□ 2.54
TMEM260-214ENST00000556975 QSER1Q2KHR3 1735 aa30.89■■■□□ 2.54
TMEM260-214ENST00000556975 ITGB4P16144 1822 aa30.89■■■□□ 2.53
TMEM260-214ENST00000556975 HMGB2P26583 209 aaKnown RBP30.87■■■□□ 2.53
TMEM260-214ENST00000556975 SGIP1Q9BQI5 828 aa30.87■■■□□ 2.53
TMEM260-214ENST00000556975 PIGBQ92521 554 aa30.86■■■□□ 2.53
TMEM260-214ENST00000556975 SMARCC1Q92922 1105 aaPredicted RBP30.86■■■□□ 2.53
TMEM260-214ENST00000556975 PALLDQ8WX93 1383 aa30.85■■■□□ 2.53
TMEM260-214ENST00000556975 SLC16A10Q8TF71 515 aa30.85■■■□□ 2.53
TMEM260-214ENST00000556975 NPC1L1Q9UHC9 1359 aa30.84■■■□□ 2.53
TMEM260-214ENST00000556975 IL13P35225 146 aa30.84■■■□□ 2.53
TMEM260-214ENST00000556975 TFCP2L1Q9NZI6 479 aa30.84■■■□□ 2.53
TMEM260-214ENST00000556975 PNPLA7Q6ZV29 1317 aa30.83■■■□□ 2.53
TMEM260-214ENST00000556975 DCAF8L1A6NGE4 600 aa30.83■■■□□ 2.53
TMEM260-214ENST00000556975 YY1P25490 414 aa30.82■■■□□ 2.52
TMEM260-214ENST00000556975 AMOTQ4VCS5 1084 aa30.82■■■□□ 2.52
TMEM260-214ENST00000556975 PLEKHO1Q53GL0 409 aaPredicted RBP30.82■■■□□ 2.52
TMEM260-214ENST00000556975 MTHFSP49914 203 aa30.81■■■□□ 2.52
TMEM260-214ENST00000556975 KDRP35968 1356 aa30.8■■■□□ 2.52
TMEM260-214ENST00000556975 CC2D1BQ5T0F9 858 aaKnown RBP30.8■■■□□ 2.52
TMEM260-214ENST00000556975 AEBP1Q8IUX7 1158 aa30.79■■■□□ 2.52
TMEM260-214ENST00000556975 TMOD3Q9NYL9 352 aa30.79■■■□□ 2.52
TMEM260-214ENST00000556975 TUBGCP6Q96RT7 1819 aa30.79■■■□□ 2.52
TMEM260-214ENST00000556975 HSP90AB1P08238 724 aaKnown RBP30.78■■■□□ 2.52
TMEM260-214ENST00000556975 SULT6B1Q6IMI4 303 aa30.78■■■□□ 2.52
TMEM260-214ENST00000556975 DCAF5Q96JK2 942 aa30.76■■■□□ 2.51
TMEM260-214ENST00000556975 C5P01031 1676 aa30.76■■■□□ 2.51
TMEM260-214ENST00000556975 TAF1LQ8IZX4 1826 aa30.75■■■□□ 2.51
TMEM260-214ENST00000556975 ERVV-2B6SEH9 535 aa30.75■■■□□ 2.51
TMEM260-214ENST00000556975 COL24A1Q17RW2 1714 aa30.74■■■□□ 2.51
TMEM260-214ENST00000556975 ZNF530Q6P9A1 599 aaPredicted RBP30.74■■■□□ 2.51
TMEM260-214ENST00000556975 ARXQ96QS3 562 aa30.74■■■□□ 2.51
TMEM260-214ENST00000556975 ASAP1Q9ULH1 1129 aa30.73■■■□□ 2.51
TMEM260-214ENST00000556975 LOC102724428A0A0B4J2F2 783 aa30.72■■■□□ 2.51
TMEM260-214ENST00000556975 SIK1P57059 783 aa30.72■■■□□ 2.51
TMEM260-214ENST00000556975 COL23A1Q86Y22 540 aaPredicted RBP30.72■■■□□ 2.51
TMEM260-214ENST00000556975 SYT17Q9BSW7 474 aa30.71■■■□□ 2.51
TMEM260-214ENST00000556975 FHDC1Q9C0D6 1143 aaPredicted RBP30.71■■■□□ 2.51
TMEM260-214ENST00000556975 ATG3Q9NT62 314 aa30.71■■■□□ 2.51
TMEM260-214ENST00000556975 FLAD1Q8NFF5 587 aa30.7■■■□□ 2.51
TMEM260-214ENST00000556975 KDM6AO15550 1401 aaPredicted RBP30.68■■■□□ 2.5
TMEM260-214ENST00000556975 DIAPH1O60610 1272 aaKnown RBP30.68■■■□□ 2.5
TMEM260-214ENST00000556975 C1orf141Q5JVX7 400 aa30.68■■■□□ 2.5
TMEM260-214ENST00000556975 MAP3K5Q99683 1374 aa30.67■■■□□ 2.5
TMEM260-214ENST00000556975 C4BP0C0L5 1744 aa30.67■■■□□ 2.5
TMEM260-214ENST00000556975 POLD1P28340 1107 aa30.67■■■□□ 2.5
TMEM260-214ENST00000556975 AK7Q96M32 723 aa30.64■■■□□ 2.5
TMEM260-214ENST00000556975 MSH5O43196 834 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms