RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 EXOC5O00471 708 aa23.4■■□□□ 1.34
PSEN1-218ENST00000556864 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.33
PSEN1-218ENST00000556864 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.33
PSEN1-218ENST00000556864 AEBP1Q8IUX7 1158 aa23.39■■□□□ 1.33
PSEN1-218ENST00000556864 SHANK3Q9BYB0 1731 aa23.38■■□□□ 1.33
PSEN1-218ENST00000556864 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
PSEN1-218ENST00000556864 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
PSEN1-218ENST00000556864 HMOX1P09601 288 aa23.37■■□□□ 1.33
PSEN1-218ENST00000556864 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
PSEN1-218ENST00000556864 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
PSEN1-218ENST00000556864 WDR43Q15061 677 aaKnown RBP eCLIP23.36■■□□□ 1.33
PSEN1-218ENST00000556864 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
PSEN1-218ENST00000556864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.336e-6■□□□□ 8.9
PSEN1-218ENST00000556864 AMOTQ4VCS5 1084 aa23.34■■□□□ 1.33
PSEN1-218ENST00000556864 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.33
PSEN1-218ENST00000556864 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
PSEN1-218ENST00000556864 NEFMP07197 916 aa23.32■■□□□ 1.32
PSEN1-218ENST00000556864 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
PSEN1-218ENST00000556864 PNNQ9H307 717 aaKnown RBP23.32■■□□□ 1.32
PSEN1-218ENST00000556864 BCL9O00512 1426 aa23.32■■□□□ 1.32
PSEN1-218ENST00000556864 FCHSD2O94868 740 aa23.31■■□□□ 1.32
PSEN1-218ENST00000556864 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
PSEN1-218ENST00000556864 FAM196AQ6ZSG2 479 aa23.3■■□□□ 1.32
PSEN1-218ENST00000556864 MARCH10Q8NA82 808 aaPredicted RBP23.3■■□□□ 1.32
PSEN1-218ENST00000556864 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
PSEN1-218ENST00000556864 ZNF530Q6P9A1 599 aaPredicted RBP23.28■■□□□ 1.32
PSEN1-218ENST00000556864 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
PSEN1-218ENST00000556864 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
PSEN1-218ENST00000556864 NHSQ6T4R5 1651 aa23.26■■□□□ 1.31
PSEN1-218ENST00000556864 DOT1LQ8TEK3 1739 aa23.26■■□□□ 1.31
PSEN1-218ENST00000556864 IFNL2Q8IZJ0 200 aa23.26■■□□□ 1.31
PSEN1-218ENST00000556864 GAS2L2Q8NHY3 880 aa23.26■■□□□ 1.31
PSEN1-218ENST00000556864 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
PSEN1-218ENST00000556864 FAM182BQ5T319 152 aa23.25■■□□□ 1.31
PSEN1-218ENST00000556864 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
PSEN1-218ENST00000556864 CYP27B1O15528 508 aa23.24■■□□□ 1.31
PSEN1-218ENST00000556864 PHKG2P15735 406 aa23.24■■□□□ 1.31
PSEN1-218ENST00000556864 CCDC184Q52MB2 194 aa23.23■■□□□ 1.31
PSEN1-218ENST00000556864 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
PSEN1-218ENST00000556864 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
PSEN1-218ENST00000556864 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
PSEN1-218ENST00000556864 TNS1Q9HBL0 1735 aaKnown RBP23.2■■□□□ 1.3
PSEN1-218ENST00000556864 TOGARAM1Q9Y4F4 1720 aa23.2■■□□□ 1.3
PSEN1-218ENST00000556864 NKX1-1Q15270 411 aaPredicted RBP23.2■■□□□ 1.3
PSEN1-218ENST00000556864 PLEKHF1Q96S99 279 aa23.19■■□□□ 1.3
PSEN1-218ENST00000556864 ADAMTS8Q9UP79 889 aa23.19■■□□□ 1.3
PSEN1-218ENST00000556864 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
PSEN1-218ENST00000556864 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
PSEN1-218ENST00000556864 CCDC125Q86Z20 511 aa23.18■■□□□ 1.3
PSEN1-218ENST00000556864 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
PSEN1-218ENST00000556864 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
PSEN1-218ENST00000556864 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
PSEN1-218ENST00000556864 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-218ENST00000556864 ADAMTS7Q9UKP4 1686 aa23.17■■□□□ 1.3
PSEN1-218ENST00000556864 PHACTR3Q96KR7 559 aa23.17■■□□□ 1.3
PSEN1-218ENST00000556864 TRIM37O94972 964 aa23.15■■□□□ 1.3
PSEN1-218ENST00000556864 MIER1Q8N108 512 aa23.15■■□□□ 1.3
PSEN1-218ENST00000556864 MRC1P22897 1456 aa23.15■■□□□ 1.3
PSEN1-218ENST00000556864 GNAT3A8MTJ3 354 aa23.14■■□□□ 1.29
PSEN1-218ENST00000556864 NFE2L2Q16236 605 aa23.14■■□□□ 1.29
PSEN1-218ENST00000556864 CCDC146Q8IYE0 955 aa23.14■■□□□ 1.29
PSEN1-218ENST00000556864 ACSBG1Q96GR2 724 aa23.14■■□□□ 1.29
PSEN1-218ENST00000556864 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
PSEN1-218ENST00000556864 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
PSEN1-218ENST00000556864 UPF1Q92900 1129 aaKnown RBP eCLIP23.13■■□□□ 1.29
PSEN1-218ENST00000556864 SYTL4Q96C24 671 aaPredicted RBP23.13■■□□□ 1.29
PSEN1-218ENST00000556864 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
PSEN1-218ENST00000556864 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
PSEN1-218ENST00000556864 BTAF1O14981 1849 aa23.11■■□□□ 1.29
PSEN1-218ENST00000556864 ERVV-2B6SEH9 535 aa23.11■■□□□ 1.29
PSEN1-218ENST00000556864 SOCS7O14512 581 aa23.11■■□□□ 1.29
PSEN1-218ENST00000556864 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
PSEN1-218ENST00000556864 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
PSEN1-218ENST00000556864 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
PSEN1-218ENST00000556864 EP400Q96L91 3159 aa23.1■■□□□ 1.29
PSEN1-218ENST00000556864 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
PSEN1-218ENST00000556864 PRIM1P49642 420 aaKnown RBP23.1■■□□□ 1.29
PSEN1-218ENST00000556864 FAM9BQ8IZU0 186 aa23.1■■□□□ 1.29
PSEN1-218ENST00000556864 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
PSEN1-218ENST00000556864 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
PSEN1-218ENST00000556864 BAG6P46379 1132 aa23.09■■□□□ 1.29
PSEN1-218ENST00000556864 ITGB4P16144 1822 aa23.08■■□□□ 1.29
PSEN1-218ENST00000556864 KCNQ2O43526 872 aa23.08■■□□□ 1.29
PSEN1-218ENST00000556864 APBA3O96018 575 aa23.07■■□□□ 1.28
PSEN1-218ENST00000556864 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
PSEN1-218ENST00000556864 CABP4P57796 275 aa23.07■■□□□ 1.28
PSEN1-218ENST00000556864 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
PSEN1-218ENST00000556864 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
PSEN1-218ENST00000556864 CEMIPQ8WUJ3 1361 aa23.06■■□□□ 1.28
PSEN1-218ENST00000556864 TEFQ10587 303 aa23.05■■□□□ 1.28
PSEN1-218ENST00000556864 SLC52A2Q9HAB3 445 aa23.05■■□□□ 1.28
PSEN1-218ENST00000556864 RIPK4P57078 832 aa23.04■■□□□ 1.28
PSEN1-218ENST00000556864 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
PSEN1-218ENST00000556864 LGR6Q9HBX8 967 aa23.03■■□□□ 1.28
PSEN1-218ENST00000556864 PAPPAQ13219 1627 aa23.03■■□□□ 1.28
PSEN1-218ENST00000556864 APAF1O14727 1248 aa23.02■■□□□ 1.28
PSEN1-218ENST00000556864 PTF1AQ7RTS3 328 aa23.02■■□□□ 1.28
PSEN1-218ENST00000556864 PIGBQ92521 554 aa23.02■■□□□ 1.28
PSEN1-218ENST00000556864 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
PSEN1-218ENST00000556864 SIPA1L3O60292 1781 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms