RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 PANK3Q9H999 370 aa8.81□□□□□ -1
LGMN-213ENST00000556790 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
LGMN-213ENST00000556790 RGPD3A6NKT7 1758 aaPredicted RBP8.81□□□□□ -1
LGMN-213ENST00000556790 RGPD4Q7Z3J3 1758 aa8.81□□□□□ -1
LGMN-213ENST00000556790 CLSPNQ9HAW4 1339 aa8.8□□□□□ -1
LGMN-213ENST00000556790 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
LGMN-213ENST00000556790 TUBGCP6Q96RT7 1819 aa8.8□□□□□ -1
LGMN-213ENST00000556790 PLSCR1O15162 318 aa8.8□□□□□ -1
LGMN-213ENST00000556790 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
LGMN-213ENST00000556790 ZNF827Q17R98 1081 aa8.8□□□□□ -1
LGMN-213ENST00000556790 TIMELESSQ9UNS1 1208 aa8.8□□□□□ -1
LGMN-213ENST00000556790 ATF5Q9Y2D1 282 aaPredicted RBP8.8□□□□□ -1
LGMN-213ENST00000556790 ANKRD26Q9UPS8 1709 aa8.8□□□□□ -1
LGMN-213ENST00000556790 NSD2O96028 1365 aa8.79□□□□□ -1
LGMN-213ENST00000556790 PARD3Q8TEW0 1356 aa8.79□□□□□ -1
LGMN-213ENST00000556790 NBPF14Q5TI25 921 aa8.79□□□□□ -1
LGMN-213ENST00000556790 SMIM5Q71RC9 77 aa8.79□□□□□ -1
LGMN-213ENST00000556790 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
LGMN-213ENST00000556790 PAPPAQ13219 1627 aa8.79□□□□□ -1
LGMN-213ENST00000556790 RTL1A6NKG5 1358 aa8.78□□□□□ -1
LGMN-213ENST00000556790 FLT4P35916 1363 aa8.78□□□□□ -1
LGMN-213ENST00000556790 CDCA8Q53HL2 280 aa8.78□□□□□ -1
LGMN-213ENST00000556790 POLKQ9UBT6 870 aa8.78□□□□□ -1
LGMN-213ENST00000556790 BCL9O00512 1426 aa8.78□□□□□ -1
LGMN-213ENST00000556790 INSRP06213 1382 aa8.77□□□□□ -1.01
LGMN-213ENST00000556790 EYA1Q99502 592 aa8.77□□□□□ -1.01
LGMN-213ENST00000556790 ITGB4P16144 1822 aa8.77□□□□□ -1.01
LGMN-213ENST00000556790 CYP27B1O15528 508 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
LGMN-213ENST00000556790 EIF4A2Q14240 407 aaKnown RBP8.76□□□□□ -1.01
LGMN-213ENST00000556790 SLC15A2Q16348 729 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 RAPGEF4Q8WZA2 1011 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 STK32BQ9NY57 414 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 SMG6Q86US8 1419 aaKnown RBP8.76□□□□□ -1.01
LGMN-213ENST00000556790 LY75O60449 1722 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 KIF7Q2M1P5 1343 aa8.76□□□□□ -1.01
LGMN-213ENST00000556790 PKD1L3Q7Z443 1732 aa8.75□□□□□ -1.01
LGMN-213ENST00000556790 PTGER2P43116 358 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 AMIGO3Q86WK7 504 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 AEBP1Q8IUX7 1158 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 SPON1Q9HCB6 807 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 PPP1R1BQ9UD71 204 aaPredicted RBP8.74□□□□□ -1.01
LGMN-213ENST00000556790 WASHC2AQ641Q2 1341 aa8.74□□□□□ -1.01
LGMN-213ENST00000556790 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
LGMN-213ENST00000556790 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
LGMN-213ENST00000556790 MSL1Q68DK7 614 aa8.72□□□□□ -1.01
LGMN-213ENST00000556790 MORC1Q86VD1 984 aa8.72□□□□□ -1.01
LGMN-213ENST00000556790 CCNL1Q9UK58 526 aaPredicted RBP8.72□□□□□ -1.01
LGMN-213ENST00000556790 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
LGMN-213ENST00000556790 PNPLA7Q6ZV29 1317 aa8.72□□□□□ -1.01
LGMN-213ENST00000556790 C5P01031 1676 aa8.72□□□□□ -1.01
LGMN-213ENST00000556790 NCAPD2Q15021 1401 aa8.71□□□□□ -1.01
LGMN-213ENST00000556790 KLHL34Q8N239 644 aa8.71□□□□□ -1.02
LGMN-213ENST00000556790 PIGBQ92521 554 aa8.71□□□□□ -1.02
LGMN-213ENST00000556790 PCDH11XQ9BZA7 1347 aa8.71□□□□□ -1.02
LGMN-213ENST00000556790 PCDH11YQ9BZA8 1340 aa8.71□□□□□ -1.02
LGMN-213ENST00000556790 AMER1Q5JTC6 1135 aaPredicted RBP8.7□□□□□ -1.02
LGMN-213ENST00000556790 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
LGMN-213ENST00000556790 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
LGMN-213ENST00000556790 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
LGMN-213ENST00000556790 ASAP1Q9ULH1 1129 aa8.7□□□□□ -1.02
LGMN-213ENST00000556790 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
LGMN-213ENST00000556790 PHF14O94880 888 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 HMOX1P09601 288 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 PHKG2P15735 406 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 COL23A1Q86Y22 540 aaPredicted RBP8.69□□□□□ -1.02
LGMN-213ENST00000556790 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 KIF24Q5T7B8 1368 aa8.69□□□□□ -1.02
LGMN-213ENST00000556790 QSER1Q2KHR3 1735 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
LGMN-213ENST00000556790 SULT6B1Q6IMI4 303 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 MTFR1LQ9H019 292 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 WWC3Q9ULE0 1092 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 C4BP0C0L5 1744 aa8.68□□□□□ -1.02
LGMN-213ENST00000556790 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
LGMN-213ENST00000556790 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
LGMN-213ENST00000556790 IL13P35225 146 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 MTHFSP49914 203 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 ITPK1Q13572 414 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 NLGN2Q8NFZ4 835 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 SYT17Q9BSW7 474 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 SPG7Q9UQ90 795 aa8.67□□□□□ -1.02
LGMN-213ENST00000556790 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
LGMN-213ENST00000556790 ZNF530Q6P9A1 599 aaPredicted RBP8.66□□□□□ -1.02
LGMN-213ENST00000556790 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
LGMN-213ENST00000556790 ARXQ96QS3 562 aa8.66□□□□□ -1.02
LGMN-213ENST00000556790 ATG3Q9NT62 314 aa8.66□□□□□ -1.02
LGMN-213ENST00000556790 TMOD3Q9NYL9 352 aa8.66□□□□□ -1.02
LGMN-213ENST00000556790 NKX1-1Q15270 411 aaPredicted RBP8.65□□□□□ -1.02
LGMN-213ENST00000556790 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.02
LGMN-213ENST00000556790 RBM42Q9BTD8 480 aaKnown RBP8.65□□□□□ -1.02
LGMN-213ENST00000556790 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
LGMN-213ENST00000556790 COL24A1Q17RW2 1714 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms