RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
EFCAB11-212ENST00000556639 B4GALNT3Q6L9W6 998 aa17.89■□□□□ 0.45
EFCAB11-212ENST00000556639 IL17REQ8NFR9 667 aa17.89■□□□□ 0.45
EFCAB11-212ENST00000556639 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
EFCAB11-212ENST00000556639 GNAT3A8MTJ3 354 aa17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 AHDC1Q5TGY3 1603 aaPredicted RBP17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 KRT24Q2M2I5 525 aa17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 TNNQ9UQP3 1299 aa17.88■□□□□ 0.45
EFCAB11-212ENST00000556639 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
EFCAB11-212ENST00000556639 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
EFCAB11-212ENST00000556639 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
EFCAB11-212ENST00000556639 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
EFCAB11-212ENST00000556639 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 CHL1O00533 1208 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 TOM1O60784 492 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 FAM208AQ9UK61 1670 aaKnown RBP17.86■□□□□ 0.45
EFCAB11-212ENST00000556639 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
EFCAB11-212ENST00000556639 ZNF530Q6P9A1 599 aaPredicted RBP17.85■□□□□ 0.45
EFCAB11-212ENST00000556639 VAMP4O75379 141 aa17.84■□□□□ 0.45
EFCAB11-212ENST00000556639 PLEKHO1Q53GL0 409 aaPredicted RBP17.84■□□□□ 0.45
EFCAB11-212ENST00000556639 STRN4Q9NRL3 753 aa17.84■□□□□ 0.45
EFCAB11-212ENST00000556639 PHLPP1O60346 1717 aa17.84■□□□□ 0.45
EFCAB11-212ENST00000556639 MEGF6O75095 1541 aa17.84■□□□□ 0.45
EFCAB11-212ENST00000556639 MPRIPQ6WCQ1 1025 aa17.83■□□□□ 0.45
EFCAB11-212ENST00000556639 COL5A2P05997 1499 aaPredicted RBP17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 PANK1Q8TE04 598 aa17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 ABCC6O95255 1503 aa17.83■□□□□ 0.44
EFCAB11-212ENST00000556639 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 LARP1Q6PKG0 1096 aaKnown RBP17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 RAPGEF4Q8WZA2 1011 aa17.82■□□□□ 0.44
EFCAB11-212ENST00000556639 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
EFCAB11-212ENST00000556639 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
EFCAB11-212ENST00000556639 AMOTQ4VCS5 1084 aa17.81■□□□□ 0.44
EFCAB11-212ENST00000556639 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
EFCAB11-212ENST00000556639 RLBP1P12271 317 aa17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 TATP17735 454 aaPredicted RBP17.8■□□□□ 0.44
EFCAB11-212ENST00000556639 EVA1CP58658 441 aa17.79■□□□□ 0.44
EFCAB11-212ENST00000556639 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 CEMIPQ8WUJ3 1361 aa17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 USP35Q9P2H5 1018 aa17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 NOB1Q9ULX3 412 aaKnown RBP17.78■□□□□ 0.44
EFCAB11-212ENST00000556639 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.44
EFCAB11-212ENST00000556639 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.44
EFCAB11-212ENST00000556639 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
EFCAB11-212ENST00000556639 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.44
EFCAB11-212ENST00000556639 COG6Q9Y2V7 657 aa17.77■□□□□ 0.44
EFCAB11-212ENST00000556639 RNMTO43148 476 aaKnown RBP17.77■□□□□ 0.43
EFCAB11-212ENST00000556639 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.43
EFCAB11-212ENST00000556639 KCNQ3O43525 872 aa17.76■□□□□ 0.43
EFCAB11-212ENST00000556639 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
EFCAB11-212ENST00000556639 VIRMAQ69YN4 1812 aaKnown RBP17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 CYP27B1O15528 508 aa17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 TRIM27P14373 513 aa17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 PDE3AQ14432 1141 aa17.75■□□□□ 0.43
EFCAB11-212ENST00000556639 PHKG2P15735 406 aa17.74■□□□□ 0.43
EFCAB11-212ENST00000556639 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
EFCAB11-212ENST00000556639 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
EFCAB11-212ENST00000556639 SPG7Q9UQ90 795 aa17.73■□□□□ 0.43
EFCAB11-212ENST00000556639 TEFQ10587 303 aa17.72■□□□□ 0.43
EFCAB11-212ENST00000556639 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
EFCAB11-212ENST00000556639 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 ATF7IPQ6VMQ6 1270 aa17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 ZNF428Q96B54 188 aa17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
EFCAB11-212ENST00000556639 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
EFCAB11-212ENST00000556639 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
EFCAB11-212ENST00000556639 IFNL2Q8IZJ0 200 aa17.7■□□□□ 0.42
EFCAB11-212ENST00000556639 PKD1L3Q7Z443 1732 aa17.7■□□□□ 0.42
EFCAB11-212ENST00000556639 IL2RBP14784 551 aa17.7■□□□□ 0.42
EFCAB11-212ENST00000556639 ZCRB1Q8TBF4 217 aaKnown RBP17.69■□□□□ 0.42
EFCAB11-212ENST00000556639 BRPF1P55201 1214 aaPredicted RBP17.69■□□□□ 0.42
EFCAB11-212ENST00000556639 FTSJ3Q8IY81 847 aaKnown RBP17.69■□□□□ 0.42
EFCAB11-212ENST00000556639 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
EFCAB11-212ENST00000556639 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
EFCAB11-212ENST00000556639 EIF4A1P60842 406 aaKnown RBP17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 DDX54Q8TDD1 881 aaKnown RBP17.67■□□□□ 0.42
EFCAB11-212ENST00000556639 KDM3BQ7LBC6 1761 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms