RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
STRN3-208ENST00000556577 DUSP27Q5VZP5 1158 aa10.19□□□□□ -0.78
STRN3-208ENST00000556577 CABLES1Q8TDN4 633 aa10.19□□□□□ -0.78
STRN3-208ENST00000556577 ANKRD24Q8TF21 1146 aa10.19□□□□□ -0.78
STRN3-208ENST00000556577 PHACTR3Q96KR7 559 aa10.19□□□□□ -0.78
STRN3-208ENST00000556577 RCAN3Q9UKA8 241 aa10.19□□□□□ -0.78
STRN3-208ENST00000556577 KIAA0232Q92628 1395 aa10.18□□□□□ -0.78
STRN3-208ENST00000556577 IL16Q14005 1332 aa10.18□□□□□ -0.78
STRN3-208ENST00000556577 PITPNM1O00562 1244 aa10.18□□□□□ -0.78
STRN3-208ENST00000556577 LRRC59Q96AG4 307 aaKnown RBP10.18□□□□□ -0.78
STRN3-208ENST00000556577 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
STRN3-208ENST00000556577 TRMT2AQ8IZ69 625 aaKnown RBP10.17□□□□□ -0.78
STRN3-208ENST00000556577 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
STRN3-208ENST00000556577 PRDM11Q9NQV5 511 aa10.17□□□□□ -0.78
STRN3-208ENST00000556577 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
STRN3-208ENST00000556577 ERBB3P21860 1342 aa10.16□□□□□ -0.78
STRN3-208ENST00000556577 COL16A1Q07092 1604 aaPredicted RBP10.16□□□□□ -0.78
STRN3-208ENST00000556577 UBAP1LF5GYI3 381 aa10.16□□□□□ -0.78
STRN3-208ENST00000556577 CSB-PGBD3P0DP91 1061 aa10.16□□□□□ -0.78
STRN3-208ENST00000556577 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
STRN3-208ENST00000556577 LMO7Q8WWI1 1683 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 PIP4K2BP78356 416 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 CHRNA2Q15822 529 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 NBPF6Q5VWK0 638 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 RTF1Q92541 710 aaKnown RBP10.15□□□□□ -0.78
STRN3-208ENST00000556577 NBPF4Q96M43 638 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
STRN3-208ENST00000556577 NCAPD2Q15021 1401 aa10.15□□□□□ -0.79
STRN3-208ENST00000556577 PLCD3Q8N3E9 789 aa10.14□□□□□ -0.79
STRN3-208ENST00000556577 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
STRN3-208ENST00000556577 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
STRN3-208ENST00000556577 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
STRN3-208ENST00000556577 RNF123Q5XPI4 1314 aa10.13□□□□□ -0.79
STRN3-208ENST00000556577 FANCIQ9NVI1 1328 aa10.13□□□□□ -0.79
STRN3-208ENST00000556577 MNX1P50219 401 aaPredicted RBP10.13□□□□□ -0.79
STRN3-208ENST00000556577 RRP1P56182 461 aaKnown RBP10.13□□□□□ -0.79
STRN3-208ENST00000556577 GNAI1P63096 354 aa10.13□□□□□ -0.79
STRN3-208ENST00000556577 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
STRN3-208ENST00000556577 IFT57Q9NWB7 429 aa10.13□□□□□ -0.79
STRN3-208ENST00000556577 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
STRN3-208ENST00000556577 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
STRN3-208ENST00000556577 MAP3K5Q99683 1374 aa10.13□□□□□ -0.79
STRN3-208ENST00000556577 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 IRX6P78412 446 aaPredicted RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 RAPGEF4Q8WZA2 1011 aa10.12□□□□□ -0.79
STRN3-208ENST00000556577 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 THUMPD2Q9BTF0 503 aaKnown RBP10.12□□□□□ -0.79
STRN3-208ENST00000556577 CREBZFQ9NS37 354 aa10.12□□□□□ -0.79
STRN3-208ENST00000556577 LRRC37A3O60309 1634 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 COL5A2P05997 1499 aaPredicted RBP10.11□□□□□ -0.79
STRN3-208ENST00000556577 PARP4Q9UKK3 1724 aaKnown RBP10.11□□□□□ -0.79
STRN3-208ENST00000556577 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 GNAT3A8MTJ3 354 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 HTATSF1O43719 755 aaKnown RBP10.11□□□□□ -0.79
STRN3-208ENST00000556577 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
STRN3-208ENST00000556577 AMOTQ4VCS5 1084 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
STRN3-208ENST00000556577 WDR17Q8IZU2 1322 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 TATP17735 454 aaPredicted RBP10.1□□□□□ -0.79
STRN3-208ENST00000556577 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 C1orf141Q5JVX7 400 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
STRN3-208ENST00000556577 MCM10Q7L590 875 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
STRN3-208ENST00000556577 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
STRN3-208ENST00000556577 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
STRN3-208ENST00000556577 EVA1CP58658 441 aa10.09□□□□□ -0.79
STRN3-208ENST00000556577 EXOSC9Q06265 439 aaKnown RBP10.09□□□□□ -0.79
STRN3-208ENST00000556577 TOM1L2Q6ZVM7 507 aa10.09□□□□□ -0.79
STRN3-208ENST00000556577 PKD1L3Q7Z443 1732 aa10.09□□□□□ -0.79
STRN3-208ENST00000556577 ZNF853P0CG23 659 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
STRN3-208ENST00000556577 AKAP4Q5JQC9 854 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 MBIPQ9NS73 344 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
STRN3-208ENST00000556577 CRB1P82279 1406 aa10.07□□□□□ -0.8
STRN3-208ENST00000556577 MEGF6O75095 1541 aa10.07□□□□□ -0.8
STRN3-208ENST00000556577 RARSP54136 660 aaKnown RBP10.07□□□□□ -0.8
STRN3-208ENST00000556577 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
STRN3-208ENST00000556577 JCADQ9P266 1359 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 PLIN1O60240 522 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 BTG4Q9NY30 223 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.88e-9■■■□□ 16.3
STRN3-208ENST00000556577 TSPYL4Q9UJ04 414 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 NWD2Q9ULI1 1742 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 SCN11AQ9UI33 1791 aa10.06□□□□□ -0.8
STRN3-208ENST00000556577 NUTM2BA6NNL0 878 aaPredicted RBP10.05□□□□□ -0.8
STRN3-208ENST00000556577 NUTM2EB1AL46 878 aaPredicted RBP10.05□□□□□ -0.8
STRN3-208ENST00000556577 CHL1O00533 1208 aa10.05□□□□□ -0.8
STRN3-208ENST00000556577 BCAR3O75815 825 aa10.05□□□□□ -0.8
STRN3-208ENST00000556577 TEFQ10587 303 aa10.05□□□□□ -0.8
STRN3-208ENST00000556577 NUTM2AQ8IVF1 878 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms