RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ADAMTS7Q9UKP4 1686 aa14.95□□□□□ -0.02
FOXN3-212ENST00000556541 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
FOXN3-212ENST00000556541 LRRC37A3O60309 1634 aa14.95□□□□□ -0.02
FOXN3-212ENST00000556541 IL2RBP14784 551 aa14.94□□□□□ -0.02
FOXN3-212ENST00000556541 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
FOXN3-212ENST00000556541 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
FOXN3-212ENST00000556541 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
FOXN3-212ENST00000556541 TNS2Q63HR2 1409 aa14.93□□□□□ -0.02
FOXN3-212ENST00000556541 NEFMP07197 916 aa14.93□□□□□ -0.02
FOXN3-212ENST00000556541 TATP17735 454 aaPredicted RBP14.93□□□□□ -0.02
FOXN3-212ENST00000556541 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
FOXN3-212ENST00000556541 HMOX1P09601 288 aa14.92□□□□□ -0.02
FOXN3-212ENST00000556541 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
FOXN3-212ENST00000556541 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
FOXN3-212ENST00000556541 VIRMAQ69YN4 1812 aaKnown RBP14.92□□□□□ -0.02
FOXN3-212ENST00000556541 MAPK8IP3Q9UPT6 1336 aa14.92□□□□□ -0.02
FOXN3-212ENST00000556541 RBM6P78332 1123 aaKnown RBP14.91□□□□□ -0.02
FOXN3-212ENST00000556541 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
FOXN3-212ENST00000556541 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
FOXN3-212ENST00000556541 USHBP1Q8N6Y0 703 aa14.91□□□□□ -0.02
FOXN3-212ENST00000556541 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
FOXN3-212ENST00000556541 SPG7Q9UQ90 795 aa14.9□□□□□ -0.02
FOXN3-212ENST00000556541 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
FOXN3-212ENST00000556541 BCL9O00512 1426 aa14.9□□□□□ -0.02
FOXN3-212ENST00000556541 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
FOXN3-212ENST00000556541 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
FOXN3-212ENST00000556541 PCDH11XQ9BZA7 1347 aa14.89□□□□□ -0.03
FOXN3-212ENST00000556541 PCDH11YQ9BZA8 1340 aa14.89□□□□□ -0.03
FOXN3-212ENST00000556541 ZCRB1Q8TBF4 217 aaKnown RBP14.88□□□□□ -0.03
FOXN3-212ENST00000556541 PHACTR3Q96KR7 559 aa14.88□□□□□ -0.03
FOXN3-212ENST00000556541 TMPOP42166 694 aaKnown RBP14.87□□□□□ -0.03
FOXN3-212ENST00000556541 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
FOXN3-212ENST00000556541 NKX1-1Q15270 411 aaPredicted RBP14.87□□□□□ -0.03
FOXN3-212ENST00000556541 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
FOXN3-212ENST00000556541 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
FOXN3-212ENST00000556541 MTHFSDQ2M296 383 aaKnown RBP14.86□□□□□ -0.03
FOXN3-212ENST00000556541 AKAP4Q5JQC9 854 aa14.86□□□□□ -0.03
FOXN3-212ENST00000556541 BRWD3Q6RI45 1802 aa14.86□□□□□ -0.03
FOXN3-212ENST00000556541 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 SIPA1L3O60292 1781 aaPredicted RBP14.85□□□□□ -0.03
FOXN3-212ENST00000556541 MRC1P22897 1456 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 EXOC5O00471 708 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 DDB1Q16531 1140 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 USP35Q9P2H5 1018 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 CEMIPQ8WUJ3 1361 aa14.85□□□□□ -0.03
FOXN3-212ENST00000556541 APAF1O14727 1248 aa14.84□□□□□ -0.03
FOXN3-212ENST00000556541 PHKG2P15735 406 aa14.84□□□□□ -0.03
FOXN3-212ENST00000556541 RXRBP28702 533 aa14.84□□□□□ -0.03
FOXN3-212ENST00000556541 FAM98CQ17RN3 349 aaKnown RBP14.84□□□□□ -0.03
FOXN3-212ENST00000556541 CCDC146Q8IYE0 955 aa14.84□□□□□ -0.03
FOXN3-212ENST00000556541 GNAT3A8MTJ3 354 aa14.83□□□□□ -0.04
FOXN3-212ENST00000556541 ZNF530Q6P9A1 599 aaPredicted RBP14.83□□□□□ -0.04
FOXN3-212ENST00000556541 CYP27B1O15528 508 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 UPF1Q92900 1129 aaKnown RBP eCLIP14.82□□□□□ -0.04
FOXN3-212ENST00000556541 TOGARAM1Q9Y4F4 1720 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 ZNF521Q96K83 1311 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 SRCAPQ6ZRS2 3230 aa14.82□□□□□ -0.04
FOXN3-212ENST00000556541 ITGB4P16144 1822 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 RIPK4P57078 832 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 SEPT12Q8IYM1 358 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 DCAF5Q96JK2 942 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 RGS12O14924 1447 aa14.81□□□□□ -0.04
FOXN3-212ENST00000556541 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
FOXN3-212ENST00000556541 CALD1Q05682 793 aaKnown RBP14.8□□□□□ -0.04
FOXN3-212ENST00000556541 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
FOXN3-212ENST00000556541 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
FOXN3-212ENST00000556541 IL16Q14005 1332 aa14.8□□□□□ -0.04
FOXN3-212ENST00000556541 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
FOXN3-212ENST00000556541 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
FOXN3-212ENST00000556541 WDR63Q8IWG1 891 aa14.79□□□□□ -0.04
FOXN3-212ENST00000556541 PAPPAQ13219 1627 aa14.78□□□□□ -0.04
FOXN3-212ENST00000556541 ERVV-2B6SEH9 535 aa14.78□□□□□ -0.04
FOXN3-212ENST00000556541 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
FOXN3-212ENST00000556541 WWC1Q8IX03 1113 aa14.78□□□□□ -0.04
FOXN3-212ENST00000556541 MARCH10Q8NA82 808 aaPredicted RBP14.78□□□□□ -0.04
FOXN3-212ENST00000556541 RTF1Q92541 710 aaKnown RBP14.78□□□□□ -0.04
FOXN3-212ENST00000556541 KDM3BQ7LBC6 1761 aa14.78□□□□□ -0.04
FOXN3-212ENST00000556541 RNMTO43148 476 aaKnown RBP14.77□□□□□ -0.05
FOXN3-212ENST00000556541 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
FOXN3-212ENST00000556541 IL17REQ8NFR9 667 aa14.76□□□□□ -0.05
FOXN3-212ENST00000556541 ZNF831Q5JPB2 1677 aa14.75□□□□□ -0.05
FOXN3-212ENST00000556541 KRT27Q7Z3Y8 459 aa14.75□□□□□ -0.05
FOXN3-212ENST00000556541 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
FOXN3-212ENST00000556541 UBR2Q8IWV8 1755 aa14.75□□□□□ -0.05
FOXN3-212ENST00000556541 CICQ96RK0 1608 aaPredicted RBP14.74□□□□□ -0.05
FOXN3-212ENST00000556541 IFT57Q9NWB7 429 aa14.74□□□□□ -0.05
FOXN3-212ENST00000556541 RRP7AQ9Y3A4 280 aaKnown RBP14.74□□□□□ -0.05
FOXN3-212ENST00000556541 RGPD3A6NKT7 1758 aaPredicted RBP14.73□□□□□ -0.05
FOXN3-212ENST00000556541 RGPD4Q7Z3J3 1758 aa14.73□□□□□ -0.05
FOXN3-212ENST00000556541 ZNF853P0CG23 659 aa14.73□□□□□ -0.05
FOXN3-212ENST00000556541 FAM196AQ6ZSG2 479 aa14.73□□□□□ -0.05
FOXN3-212ENST00000556541 SLC52A2Q9HAB3 445 aa14.73□□□□□ -0.05
FOXN3-212ENST00000556541 A0A0G2JS52 829 aa14.72□□□□□ -0.05
FOXN3-212ENST00000556541 GNAI1P63096 354 aa14.72□□□□□ -0.05
FOXN3-212ENST00000556541 MYT1Q01538 1121 aa14.72□□□□□ -0.05
FOXN3-212ENST00000556541 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms