RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 GDPD2Q9HCC8 539 aa6.22□□□□□ -1.41
TGFB3-205ENST00000556507 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
TGFB3-205ENST00000556507 EIF4G1Q04637 1599 aaKnown RBP6.22□□□□□ -1.41
TGFB3-205ENST00000556507 BICRAQ9NZM4 1560 aa6.22□□□□□ -1.41
TGFB3-205ENST00000556507 WIPF1O43516 503 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 ZEB1P37275 1124 aaPredicted RBP6.21□□□□□ -1.42
TGFB3-205ENST00000556507 ABL2P42684 1182 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 CTSOP43234 321 aaPredicted RBP6.21□□□□□ -1.42
TGFB3-205ENST00000556507 EIF4G2P78344 907 aaKnown RBP eCLIP6.21□□□□□ -1.42
TGFB3-205ENST00000556507 IRF5Q13568 498 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 CC2D2BQ6DHV5 1058 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 ESF1Q9H501 851 aaKnown RBP6.21□□□□□ -1.42
TGFB3-205ENST00000556507 PCDHB11Q9Y5F2 797 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 SMARCA2P51531 1590 aa6.21□□□□□ -1.42
TGFB3-205ENST00000556507 PEG3Q9GZU2 1588 aa6.2□□□□□ -1.42
TGFB3-205ENST00000556507 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
TGFB3-205ENST00000556507 ERVK-9P63128 1117 aa6.2□□□□□ -1.42
TGFB3-205ENST00000556507 MCM6Q14566 821 aa6.2□□□□□ -1.42
TGFB3-205ENST00000556507 KDF1Q8NAX2 398 aaPredicted RBP6.2□□□□□ -1.42
TGFB3-205ENST00000556507 CEP126Q9P2H0 1117 aa6.2□□□□□ -1.42
TGFB3-205ENST00000556507 ATP5J2-PTCD1G3V325 749 aa6.19□□□□□ -1.42
TGFB3-205ENST00000556507 GMPRP36959 345 aa6.19□□□□□ -1.42
TGFB3-205ENST00000556507 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
TGFB3-205ENST00000556507 PTSQ03393 145 aa6.19□□□□□ -1.42
TGFB3-205ENST00000556507 VAC14Q08AM6 782 aa6.19□□□□□ -1.42
TGFB3-205ENST00000556507 ERBB4Q15303 1308 aa6.19□□□□□ -1.42
TGFB3-205ENST00000556507 RNF217Q8TC41 542 aa6.18□□□□□ -1.42
TGFB3-205ENST00000556507 EEA1Q15075 1411 aa6.17□□□□□ -1.42
TGFB3-205ENST00000556507 SCTRP47872 440 aa6.17□□□□□ -1.42
TGFB3-205ENST00000556507 WASHC4Q2M389 1173 aa6.17□□□□□ -1.42
TGFB3-205ENST00000556507 FOXD4L5Q5VV16 416 aaPredicted RBP6.17□□□□□ -1.42
TGFB3-205ENST00000556507 CYP2U1Q7Z449 544 aa6.17□□□□□ -1.42
TGFB3-205ENST00000556507 A0A1W2PRU2 124 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 MEN1O00255 615 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 SLFNL1Q499Z3 407 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 LYSMD3Q7Z3D4 306 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 CCDC155Q8N6L0 562 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 CCDC85AQ96PX6 553 aaPredicted RBP6.16□□□□□ -1.42
TGFB3-205ENST00000556507 COG6Q9Y2V7 657 aa6.16□□□□□ -1.42
TGFB3-205ENST00000556507 SLC35F4A4IF30 521 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 MYCP01106 439 aaPredicted RBP6.15□□□□□ -1.42
TGFB3-205ENST00000556507 VSIG8P0DPA2 414 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 RNF144AP50876 292 aaPredicted RBP6.15□□□□□ -1.42
TGFB3-205ENST00000556507 SEMA3FQ13275 785 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 PRICKLE2Q7Z3G6 844 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 RNF135Q8IUD6 432 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 NLRP3Q96P20 1036 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 CDCA7Q9BWT1 371 aaPredicted RBP6.15□□□□□ -1.42
TGFB3-205ENST00000556507 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
TGFB3-205ENST00000556507 ATAD2BQ9ULI0 1458 aa6.15□□□□□ -1.43
TGFB3-205ENST00000556507 TRAK2O60296 914 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 GPC1P35052 558 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 FLIIQ13045 1269 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 TMEM132AQ24JP5 1023 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 TSGA10IPQ3SY00 556 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 WWC1Q8IX03 1113 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 PHTF2Q8N3S3 785 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 DOLKQ9UPQ8 538 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 ABCC8Q09428 1581 aa6.14□□□□□ -1.43
TGFB3-205ENST00000556507 RAD21O60216 631 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 SOX11P35716 441 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 USP4Q13107 963 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 CLN3Q13286 438 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 SLC27A3Q5K4L6 730 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 ARHGEF10LQ9HCE6 1279 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 TNIKQ9UKE5 1360 aa6.13□□□□□ -1.43
TGFB3-205ENST00000556507 GNRH1P01148 92 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 RHOQP17081 205 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 ITGA6P23229 1130 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
TGFB3-205ENST00000556507 POM121Q96HA1 1249 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 STK17AQ9UEE5 414 aa6.12□□□□□ -1.43
TGFB3-205ENST00000556507 BAZ1BQ9UIG0 1483 aaKnown RBP6.12□□□□□ -1.43
TGFB3-205ENST00000556507 WRNQ14191 1432 aaPredicted RBP eCLIP6.11□□□□□ -1.43
TGFB3-205ENST00000556507 SENP3-EIF4A1A0A087X0R7 540 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 CDC14CA4D256 554 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 UBTFP17480 764 aaKnown RBP6.11□□□□□ -1.43
TGFB3-205ENST00000556507 PPARGC1BQ86YN6 1023 aaKnown RBP6.11□□□□□ -1.43
TGFB3-205ENST00000556507 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 GPR161Q8N6U8 529 aaKnown RBP6.11□□□□□ -1.43
TGFB3-205ENST00000556507 ZSCAN1Q8NBB4 408 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 SIRT1Q96EB6 747 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 RAB6BQ9NRW1 208 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 CHIC2Q9UKJ5 165 aa6.11□□□□□ -1.43
TGFB3-205ENST00000556507 SOGA1O94964 1423 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 POU4F2Q12837 409 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 MAP7D1Q3KQU3 841 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 SV2AQ7L0J3 742 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 CNKSR1Q969H4 720 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 ARXQ96QS3 562 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 ESYT1Q9BSJ8 1104 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 GRIP2Q9C0E4 1043 aa6.1□□□□□ -1.43
TGFB3-205ENST00000556507 FAM181BA6NEQ2 426 aa6.09□□□□□ -1.43
TGFB3-205ENST00000556507 IL2RAP01589 272 aa6.09□□□□□ -1.43
TGFB3-205ENST00000556507 CENPCQ03188 943 aa6.09□□□□□ -1.43
TGFB3-205ENST00000556507 ESCO1Q5FWF5 840 aa6.09□□□□□ -1.43
TGFB3-205ENST00000556507 PLPP7Q8NBV4 271 aa6.09□□□□□ -1.43
TGFB3-205ENST00000556507 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
TGFB3-205ENST00000556507 XAGE2Q96GT9 111 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms