RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
CDKN3-210ENST00000556305 CHIC2Q9UKJ5 165 aa7.68□□□□□ -1.18
CDKN3-210ENST00000556305 NOVA2Q9UNW9 492 aaKnown RBP7.68□□□□□ -1.18
CDKN3-210ENST00000556305 MYCP01106 439 aaPredicted RBP7.67□□□□□ -1.18
CDKN3-210ENST00000556305 USP4Q13107 963 aa7.67□□□□□ -1.18
CDKN3-210ENST00000556305 PLA2G2CQ5R387 149 aa7.67□□□□□ -1.18
CDKN3-210ENST00000556305 PODXL2Q9NZ53 605 aa7.67□□□□□ -1.18
CDKN3-210ENST00000556305 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
CDKN3-210ENST00000556305 ESPNB1AK53 854 aa7.66□□□□□ -1.18
CDKN3-210ENST00000556305 BRD1O95696 1058 aa7.66□□□□□ -1.18
CDKN3-210ENST00000556305 AVPP01185 164 aa7.66□□□□□ -1.18
CDKN3-210ENST00000556305 DHX9Q08211 1270 aaKnown RBP7.66□□□□□ -1.18
CDKN3-210ENST00000556305 TRIM26Q12899 539 aaPredicted RBP7.66□□□□□ -1.18
CDKN3-210ENST00000556305 LCE2CQ5TA81 110 aa7.66□□□□□ -1.18
CDKN3-210ENST00000556305 RAB15P59190 212 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 SKOR1P84550 965 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 PSME1Q06323 249 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
CDKN3-210ENST00000556305 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 FAM200AQ8TCP9 573 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
CDKN3-210ENST00000556305 DNAAF2Q9NVR5 837 aaKnown RBP7.65□□□□□ -1.18
CDKN3-210ENST00000556305 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
CDKN3-210ENST00000556305 KCNA1Q09470 495 aa7.64□□□□□ -1.19
CDKN3-210ENST00000556305 LARGE2Q8N3Y3 721 aa7.64□□□□□ -1.19
CDKN3-210ENST00000556305 CDCA7Q9BWT1 371 aaPredicted RBP7.64□□□□□ -1.19
CDKN3-210ENST00000556305 GTF2IP78347 998 aa7.63□□□□□ -1.19
CDKN3-210ENST00000556305 PTK7Q13308 1070 aa7.63□□□□□ -1.19
CDKN3-210ENST00000556305 CRTC2Q53ET0 693 aaPredicted RBP7.63□□□□□ -1.19
CDKN3-210ENST00000556305 ANKMY2Q8IV38 441 aa7.63□□□□□ -1.19
CDKN3-210ENST00000556305 MPNDQ8N594 471 aa7.63□□□□□ -1.19
CDKN3-210ENST00000556305 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
CDKN3-210ENST00000556305 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
CDKN3-210ENST00000556305 WNT7AO00755 349 aa7.62□□□□□ -1.19
CDKN3-210ENST00000556305 FSHRP23945 695 aa7.62□□□□□ -1.19
CDKN3-210ENST00000556305 INTS6LQ5JSJ4 861 aaKnown RBP7.62□□□□□ -1.19
CDKN3-210ENST00000556305 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-210ENST00000556305 CDK15Q96Q40 435 aa7.62□□□□□ -1.19
CDKN3-210ENST00000556305 NR5A1Q13285 461 aa7.61□□□□□ -1.19
CDKN3-210ENST00000556305 SWI5Q1ZZU3 235 aa7.61□□□□□ -1.19
CDKN3-210ENST00000556305 ZMIZ1Q9ULJ6 1067 aa7.61□□□□□ -1.19
CDKN3-210ENST00000556305 TMEM88BA6NKF7 163 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 C11orf95C9JLR9 678 aaPredicted RBP7.6□□□□□ -1.19
CDKN3-210ENST00000556305 ADH1CP00326 375 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 SEC13P55735 322 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 DPYDQ12882 1025 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 TMEM164Q5U3C3 297 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 SIX5Q8N196 739 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 STK32AQ8WU08 396 aa7.6□□□□□ -1.19
CDKN3-210ENST00000556305 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CLDN10P78369 228 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CTC1Q2NKJ3 1217 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 TPCN2Q8NHX9 752 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 TOR4AQ9NXH8 423 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 PGPEP1Q9NXJ5 209 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 CCDC9Q9Y3X0 531 aaKnown RBP7.59□□□□□ -1.19
CDKN3-210ENST00000556305 TLL2Q9Y6L7 1015 aa7.59□□□□□ -1.19
CDKN3-210ENST00000556305 AXIN1O15169 862 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 ERVK-9P63128 1117 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
CDKN3-210ENST00000556305 MRGPRX2Q96LB1 330 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 WASF2Q9Y6W5 498 aa7.57□□□□□ -1.2
CDKN3-210ENST00000556305 SIAH2O43255 324 aa7.56□□□□□ -1.2
CDKN3-210ENST00000556305 CYP2U1Q7Z449 544 aa7.56□□□□□ -1.2
CDKN3-210ENST00000556305 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
CDKN3-210ENST00000556305 PCDHGA11Q9Y5H2 935 aa7.56□□□□□ -1.2
CDKN3-210ENST00000556305 GRM5P41594 1212 aa7.55□□□□□ -1.2
CDKN3-210ENST00000556305 PPP1R26Q5T8A7 1209 aaPredicted RBP7.55□□□□□ -1.2
CDKN3-210ENST00000556305 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
CDKN3-210ENST00000556305 CARNS1A5YM72 827 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 M0R2N6 131 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 TERTO14746 1132 aaKnown RBP7.54□□□□□ -1.2
CDKN3-210ENST00000556305 BACH1O14867 736 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
CDKN3-210ENST00000556305 ALDH1A1P00352 501 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 FOXC1Q12948 553 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 HINFPQ9BQA5 517 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
CDKN3-210ENST00000556305 ESCO1Q5FWF5 840 aa7.53□□□□□ -1.2
CDKN3-210ENST00000556305 TMCO4Q5TGY1 634 aa7.53□□□□□ -1.2
CDKN3-210ENST00000556305 ZNF784Q8NCA9 323 aaPredicted RBP7.53□□□□□ -1.2
CDKN3-210ENST00000556305 SNIP1Q8TAD8 396 aaKnown RBP7.53□□□□□ -1.2
CDKN3-210ENST00000556305 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
CDKN3-210ENST00000556305 TTC24A2A3L6 582 aaPredicted RBP7.52□□□□□ -1.21
CDKN3-210ENST00000556305 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
CDKN3-210ENST00000556305 ARID4AP29374 1257 aaPredicted RBP7.52□□□□□ -1.21
CDKN3-210ENST00000556305 SCTRP47872 440 aa7.52□□□□□ -1.21
CDKN3-210ENST00000556305 CYP4X1Q8N118 509 aa7.52□□□□□ -1.21
CDKN3-210ENST00000556305 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
CDKN3-210ENST00000556305 GNRH1P01148 92 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms