RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 TAS1R3Q7RTX0 852 aa6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 CXXC1Q9P0U4 656 aaPredicted RBP6.74□□□□□ -1.33
SPTLC2-204ENST00000556264 RBM47A0AV96 593 aaKnown RBP6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 POTEMA6NI47 508 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 ERCC3P19447 782 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 RAB15P59190 212 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 SH3BP2P78314 561 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 C1QTNF2Q9BXJ5 285 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
SPTLC2-204ENST00000556264 NOM1Q5C9Z4 860 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-204ENST00000556264 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
SPTLC2-204ENST00000556264 ANO2Q9NQ90 1003 aa6.72□□□□□ -1.33
SPTLC2-204ENST00000556264 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
SPTLC2-204ENST00000556264 ZNF211Q13398 564 aaPredicted RBP6.71□□□□□ -1.34
SPTLC2-204ENST00000556264 CCDC125Q86Z20 511 aa6.71□□□□□ -1.34
SPTLC2-204ENST00000556264 TRMT44Q8IYL2 757 aaKnown RBP6.71□□□□□ -1.34
SPTLC2-204ENST00000556264 PCDH10Q9P2E7 1040 aa6.71□□□□□ -1.34
SPTLC2-204ENST00000556264 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 KCTD15Q96SI1 283 aaPredicted RBP6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 SEPT3Q9UH03 358 aa6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 EGFL7Q9UHF1 273 aa6.7□□□□□ -1.34
SPTLC2-204ENST00000556264 H3BRB1 525 aa6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 ICMTO60725 284 aa6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 WEE1P30291 646 aa6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 GTF3C2Q8WUA4 911 aaPredicted RBP6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 MKNK1Q9BUB5 465 aa6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 BCL2L13Q9BXK5 485 aa6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 TUT1Q9H6E5 874 aaKnown RBP6.69□□□□□ -1.34
SPTLC2-204ENST00000556264 ANKRD33BA6NCL7 494 aa6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 ZBTB24O43167 697 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 SCTRP47872 440 aa6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 CAPN12Q6ZSI9 719 aa6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 GLYCTKQ8IVS8 523 aa6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 GAS2L2Q8NHY3 880 aa6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 ESF1Q9H501 851 aaKnown RBP6.68□□□□□ -1.34
SPTLC2-204ENST00000556264 M0R2N6 131 aa6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 ERVH48-1M5A8F1 160 aa6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 ZNF16P17020 682 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 FKBP5Q13451 457 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 PURBQ96QR8 312 aaKnown RBP6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
SPTLC2-204ENST00000556264 VARSP26640 1264 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-204ENST00000556264 INTS6LQ5JSJ4 861 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-204ENST00000556264 GIPC2Q8TF65 315 aa6.66□□□□□ -1.34
SPTLC2-204ENST00000556264 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
SPTLC2-204ENST00000556264 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
SPTLC2-204ENST00000556264 C21orf2O43822 256 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 IGSF3O75054 1194 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 MAPK1P28482 360 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 SKOR1P84550 965 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 FKBP4Q02790 459 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 TRIM32Q13049 653 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 SF3B2Q13435 895 aaKnown RBP6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 MTMR3Q13615 1198 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 NAA30Q147X3 362 aaPredicted RBP6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 ECM1Q16610 540 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 NPAS4Q8IUM7 802 aa6.65□□□□□ -1.34
SPTLC2-204ENST00000556264 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 RNF223E7ERA6 249 aa6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 STAU1O95793 577 aaKnown RBP6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
SPTLC2-204ENST00000556264 IGFBP4P22692 258 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 GDF10P55107 478 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 WNT7BP56706 349 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 ERVK-9P63128 1117 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 PLA2G2CQ5R387 149 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 OSBPL3Q9H4L5 887 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 CYLDQ9NQC7 956 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 SERTAD1Q9UHV2 236 aa6.63□□□□□ -1.35
SPTLC2-204ENST00000556264 BACH1O14867 736 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 SCNN1DP51172 638 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 ARHGAP4P98171 946 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 DCTN4Q9UJW0 460 aa6.62□□□□□ -1.35
SPTLC2-204ENST00000556264 ATAD2Q6PL18 1390 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 KCNC4Q03721 635 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 ANKLE1Q8NAG6 615 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 HELQQ8TDG4 1101 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 CHMP7Q8WUX9 453 aaPredicted RBP6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 ASB16Q96NS5 453 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 IGSF5Q9NSI5 407 aa6.61□□□□□ -1.35
SPTLC2-204ENST00000556264 FOXO3O43524 673 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 INHAP05111 366 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 FSHRP23945 695 aa6.6□□□□□ -1.35
SPTLC2-204ENST00000556264 GRM5P41594 1212 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms