RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 SOCS7O14512 581 aa21.86■■□□□ 1.09
PSMA6-212ENST00000556167 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
PSMA6-212ENST00000556167 ZCRB1Q8TBF4 217 aaKnown RBP21.85■■□□□ 1.09
PSMA6-212ENST00000556167 KDRP35968 1356 aa21.85■■□□□ 1.09
PSMA6-212ENST00000556167 ANP32CO43423 234 aa21.84■■□□□ 1.09
PSMA6-212ENST00000556167 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
PSMA6-212ENST00000556167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
PSMA6-212ENST00000556167 BCL9O00512 1426 aa21.82■■□□□ 1.08
PSMA6-212ENST00000556167 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
PSMA6-212ENST00000556167 MARCH10Q8NA82 808 aaPredicted RBP21.82■■□□□ 1.08
PSMA6-212ENST00000556167 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
PSMA6-212ENST00000556167 CCDC125Q86Z20 511 aa21.81■■□□□ 1.08
PSMA6-212ENST00000556167 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
PSMA6-212ENST00000556167 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
PSMA6-212ENST00000556167 EP400Q96L91 3159 aa21.8■■□□□ 1.08
PSMA6-212ENST00000556167 AMOTQ4VCS5 1084 aa21.79■■□□□ 1.08
PSMA6-212ENST00000556167 FAM182BQ5T319 152 aa21.79■■□□□ 1.08
PSMA6-212ENST00000556167 AEBP1Q8IUX7 1158 aa21.79■■□□□ 1.08
PSMA6-212ENST00000556167 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
PSMA6-212ENST00000556167 PLEKHO1Q53GL0 409 aaPredicted RBP21.78■■□□□ 1.08
PSMA6-212ENST00000556167 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
PSMA6-212ENST00000556167 HMOX1P09601 288 aa21.77■■□□□ 1.08
PSMA6-212ENST00000556167 U2AF1L5P0DN76 240 aaPredicted RBP21.76■■□□□ 1.07
PSMA6-212ENST00000556167 U2AF1Q01081 240 aaKnown RBP eCLIP21.76■■□□□ 1.07
PSMA6-212ENST00000556167 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
PSMA6-212ENST00000556167 TNS1Q9HBL0 1735 aaKnown RBP21.76■■□□□ 1.07
PSMA6-212ENST00000556167 NHSQ6T4R5 1651 aa21.75■■□□□ 1.07
PSMA6-212ENST00000556167 DOT1LQ8TEK3 1739 aa21.75■■□□□ 1.07
PSMA6-212ENST00000556167 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
PSMA6-212ENST00000556167 FCHSD2O94868 740 aa21.73■■□□□ 1.07
PSMA6-212ENST00000556167 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
PSMA6-212ENST00000556167 CYP27B1O15528 508 aa21.72■■□□□ 1.07
PSMA6-212ENST00000556167 PNNQ9H307 717 aaKnown RBP21.72■■□□□ 1.07
PSMA6-212ENST00000556167 TRIM37O94972 964 aa21.71■■□□□ 1.07
PSMA6-212ENST00000556167 HSP90AB1P08238 724 aaKnown RBP21.71■■□□□ 1.07
PSMA6-212ENST00000556167 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
PSMA6-212ENST00000556167 ITGB4P16144 1822 aa21.71■■□□□ 1.07
PSMA6-212ENST00000556167 PHKG2P15735 406 aa21.7■■□□□ 1.06
PSMA6-212ENST00000556167 NKX1-1Q15270 411 aaPredicted RBP21.7■■□□□ 1.06
PSMA6-212ENST00000556167 ZNF530Q6P9A1 599 aaPredicted RBP21.7■■□□□ 1.06
PSMA6-212ENST00000556167 NEFMP07197 916 aa21.69■■□□□ 1.06
PSMA6-212ENST00000556167 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
PSMA6-212ENST00000556167 BCL11BQ9C0K0 894 aaPredicted RBP21.69■■□□□ 1.06
PSMA6-212ENST00000556167 PRKAR2BP31323 418 aa21.68■■□□□ 1.06
PSMA6-212ENST00000556167 WDR43Q15061 677 aaKnown RBP eCLIP21.68■■□□□ 1.06
PSMA6-212ENST00000556167 RGPD3A6NKT7 1758 aaPredicted RBP21.68■■□□□ 1.06
PSMA6-212ENST00000556167 RGPD4Q7Z3J3 1758 aa21.68■■□□□ 1.06
PSMA6-212ENST00000556167 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
PSMA6-212ENST00000556167 BTAF1O14981 1849 aa21.68■■□□□ 1.06
PSMA6-212ENST00000556167 TOGARAM1Q9Y4F4 1720 aa21.67■■□□□ 1.06
PSMA6-212ENST00000556167 BAG6P46379 1132 aa21.67■■□□□ 1.06
PSMA6-212ENST00000556167 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
PSMA6-212ENST00000556167 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
PSMA6-212ENST00000556167 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
PSMA6-212ENST00000556167 APBA3O96018 575 aa21.64■■□□□ 1.05
PSMA6-212ENST00000556167 MTHFSDQ2M296 383 aaKnown RBP21.64■■□□□ 1.05
PSMA6-212ENST00000556167 DCAF5Q96JK2 942 aa21.64■■□□□ 1.05
PSMA6-212ENST00000556167 DLG5Q8TDM6 1919 aa21.63■■□□□ 1.05
PSMA6-212ENST00000556167 KCNQ2O43526 872 aa21.62■■□□□ 1.05
PSMA6-212ENST00000556167 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
PSMA6-212ENST00000556167 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
PSMA6-212ENST00000556167 MAPK8IP3Q9UPT6 1336 aa21.61■■□□□ 1.05
PSMA6-212ENST00000556167 ADAMTS7Q9UKP4 1686 aa21.61■■□□□ 1.05
PSMA6-212ENST00000556167 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
PSMA6-212ENST00000556167 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
PSMA6-212ENST00000556167 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
PSMA6-212ENST00000556167 PLSCR1O15162 318 aa21.6■■□□□ 1.05
PSMA6-212ENST00000556167 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
PSMA6-212ENST00000556167 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
PSMA6-212ENST00000556167 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
PSMA6-212ENST00000556167 KDM6AO15550 1401 aaPredicted RBP21.58■■□□□ 1.05
PSMA6-212ENST00000556167 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
PSMA6-212ENST00000556167 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
PSMA6-212ENST00000556167 RREB1Q92766 1687 aa21.58■■□□□ 1.05
PSMA6-212ENST00000556167 LY75O60449 1722 aa21.58■■□□□ 1.04
PSMA6-212ENST00000556167 EN1Q05925 392 aaPredicted RBP21.57■■□□□ 1.04
PSMA6-212ENST00000556167 MPRIPQ6WCQ1 1025 aa21.57■■□□□ 1.04
PSMA6-212ENST00000556167 PTF1AQ7RTS3 328 aa21.57■■□□□ 1.04
PSMA6-212ENST00000556167 TMOD3Q9NYL9 352 aa21.57■■□□□ 1.04
PSMA6-212ENST00000556167 ADAMTS8Q9UP79 889 aa21.57■■□□□ 1.04
PSMA6-212ENST00000556167 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
PSMA6-212ENST00000556167 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
PSMA6-212ENST00000556167 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
PSMA6-212ENST00000556167 CABP4P57796 275 aa21.55■■□□□ 1.04
PSMA6-212ENST00000556167 RUNDC1Q96C34 613 aa21.55■■□□□ 1.04
PSMA6-212ENST00000556167 CAMKK2Q96RR4 588 aa21.55■■□□□ 1.04
PSMA6-212ENST00000556167 MRC1P22897 1456 aa21.54■■□□□ 1.04
PSMA6-212ENST00000556167 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
PSMA6-212ENST00000556167 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
PSMA6-212ENST00000556167 PNISRQ8TF01 805 aaKnown RBP21.53■■□□□ 1.04
PSMA6-212ENST00000556167 SMARCC1Q92922 1105 aaPredicted RBP21.53■■□□□ 1.04
PSMA6-212ENST00000556167 SIPA1L3O60292 1781 aaPredicted RBP21.53■■□□□ 1.04
PSMA6-212ENST00000556167 EZH2Q15910 746 aaKnown RBP21.52■■□□□ 1.04
PSMA6-212ENST00000556167 PIGBQ92521 554 aa21.52■■□□□ 1.04
PSMA6-212ENST00000556167 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.03
PSMA6-212ENST00000556167 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
PSMA6-212ENST00000556167 HMGB2P26583 209 aaKnown RBP21.51■■□□□ 1.03
PSMA6-212ENST00000556167 SLC52A2Q9HAB3 445 aa21.51■■□□□ 1.03
PSMA6-212ENST00000556167 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
PSMA6-212ENST00000556167 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms