RNA–Protein interactions for RNA: ENST00000556138.1

LINC01550-205, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 4

Gene LINC01550, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-205ENST00000556138 NXF1Q9UBU9 619 aaKnown RBP7.94□□□□□ -1.14
LINC01550-205ENST00000556138 CHIC2Q9UKJ5 165 aa7.94□□□□□ -1.14
LINC01550-205ENST00000556138 ATP5J2-PTCD1G3V325 749 aa7.93□□□□□ -1.14
LINC01550-205ENST00000556138 WFS1O76024 890 aa7.93□□□□□ -1.14
LINC01550-205ENST00000556138 SLFNL1Q499Z3 407 aa7.93□□□□□ -1.14
LINC01550-205ENST00000556138 CCDC125Q86Z20 511 aa7.93□□□□□ -1.14
LINC01550-205ENST00000556138 POLMQ9NP87 494 aaPredicted RBP7.93□□□□□ -1.14
LINC01550-205ENST00000556138 STAU1O95793 577 aaKnown RBP7.92□□□□□ -1.14
LINC01550-205ENST00000556138 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
LINC01550-205ENST00000556138 RNF217Q8TC41 542 aa7.92□□□□□ -1.14
LINC01550-205ENST00000556138 A0A1W2PRU2 124 aa7.91□□□□□ -1.14
LINC01550-205ENST00000556138 OXLD1Q5BKU9 147 aa7.91□□□□□ -1.14
LINC01550-205ENST00000556138 FNBP4Q8N3X1 1017 aaPredicted RBP7.91□□□□□ -1.14
LINC01550-205ENST00000556138 RAB6BQ9NRW1 208 aa7.91□□□□□ -1.14
LINC01550-205ENST00000556138 DOLKQ9UPQ8 538 aa7.91□□□□□ -1.14
LINC01550-205ENST00000556138 ERBB4Q15303 1308 aa7.9□□□□□ -1.14
LINC01550-205ENST00000556138 SOX11P35716 441 aa7.9□□□□□ -1.14
LINC01550-205ENST00000556138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
LINC01550-205ENST00000556138 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
LINC01550-205ENST00000556138 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
LINC01550-205ENST00000556138 H3BM21 787 aa7.89□□□□□ -1.15
LINC01550-205ENST00000556138 MEN1O00255 615 aa7.89□□□□□ -1.15
LINC01550-205ENST00000556138 PTSQ03393 145 aa7.89□□□□□ -1.15
LINC01550-205ENST00000556138 CYP2U1Q7Z449 544 aa7.89□□□□□ -1.15
LINC01550-205ENST00000556138 PROSER2Q86WR7 435 aaPredicted RBP7.89□□□□□ -1.15
LINC01550-205ENST00000556138 PPFIA3O75145 1194 aa7.88□□□□□ -1.15
LINC01550-205ENST00000556138 IL2RAP01589 272 aa7.87□□□□□ -1.15
LINC01550-205ENST00000556138 RNF144AP50876 292 aaPredicted RBP7.87□□□□□ -1.15
LINC01550-205ENST00000556138 CLN3Q13286 438 aa7.87□□□□□ -1.15
LINC01550-205ENST00000556138 PRICKLE2Q7Z3G6 844 aa7.87□□□□□ -1.15
LINC01550-205ENST00000556138 WWC1Q8IX03 1113 aa7.87□□□□□ -1.15
LINC01550-205ENST00000556138 UCN2Q96RP3 112 aa7.87□□□□□ -1.15
LINC01550-205ENST00000556138 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
LINC01550-205ENST00000556138 MYCP01106 439 aaPredicted RBP7.86□□□□□ -1.15
LINC01550-205ENST00000556138 RHOQP17081 205 aa7.86□□□□□ -1.15
LINC01550-205ENST00000556138 HDGFL1Q5TGJ6 251 aa7.86□□□□□ -1.15
LINC01550-205ENST00000556138 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
LINC01550-205ENST00000556138 SLC35F4A4IF30 521 aa7.85□□□□□ -1.15
LINC01550-205ENST00000556138 SKIP12755 728 aa7.85□□□□□ -1.15
LINC01550-205ENST00000556138 LYSMD3Q7Z3D4 306 aa7.85□□□□□ -1.15
LINC01550-205ENST00000556138 ESF1Q9H501 851 aaKnown RBP7.85□□□□□ -1.15
LINC01550-205ENST00000556138 ETNK1Q9HBU6 452 aa7.85□□□□□ -1.15
LINC01550-205ENST00000556138 A6NJR5 290 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 GNRH1P01148 92 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 GMPRP36959 345 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 USP4Q13107 963 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 MAP7D1Q3KQU3 841 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 DEPDC4Q8N2C3 294 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 CCDC155Q8N6L0 562 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 SLC16A10Q8TF71 515 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 CNKSR1Q969H4 720 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 TRIM52Q96A61 297 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
LINC01550-205ENST00000556138 TBC1D9Q6ZT07 1266 aa7.83□□□□□ -1.16
LINC01550-205ENST00000556138 NLRP3Q96P20 1036 aa7.83□□□□□ -1.16
LINC01550-205ENST00000556138 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
LINC01550-205ENST00000556138 GRIP2Q9C0E4 1043 aa7.83□□□□□ -1.16
LINC01550-205ENST00000556138 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 VSIG8P0DPA2 414 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 GPC1P35052 558 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 SCNN1DP51172 638 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 CENPCQ03188 943 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 POU4F2Q12837 409 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 NCOA4Q13772 614 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 IRF7Q92985 503 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 GLMNQ92990 594 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
LINC01550-205ENST00000556138 CUEDC1Q9NWM3 386 aaPredicted RBP7.82□□□□□ -1.16
LINC01550-205ENST00000556138 WIPF1O43516 503 aa7.81□□□□□ -1.16
LINC01550-205ENST00000556138 SLC27A3Q5K4L6 730 aa7.81□□□□□ -1.16
LINC01550-205ENST00000556138 GPR161Q8N6U8 529 aaKnown RBP7.81□□□□□ -1.16
LINC01550-205ENST00000556138 NFATC2IPQ8NCF5 419 aa7.81□□□□□ -1.16
LINC01550-205ENST00000556138 FHDC1Q9C0D6 1143 aaPredicted RBP7.81□□□□□ -1.16
LINC01550-205ENST00000556138 PCDHGA11Q9Y5H2 935 aa7.81□□□□□ -1.16
LINC01550-205ENST00000556138 ITGA6P23229 1130 aa7.8□□□□□ -1.16
LINC01550-205ENST00000556138 TMEM229AB2RXF0 380 aa7.79□□□□□ -1.16
LINC01550-205ENST00000556138 GDF10P55107 478 aa7.79□□□□□ -1.16
LINC01550-205ENST00000556138 EML3Q32P44 896 aa7.79□□□□□ -1.16
LINC01550-205ENST00000556138 SIRT1Q96EB6 747 aa7.79□□□□□ -1.16
LINC01550-205ENST00000556138 USP17L3A6NCW0 530 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 USP17L4A6NCW7 530 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 SPATA31C2B4DYI2 1134 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 NBPF10Q6P3W6 841 aaKnown RBP7.78□□□□□ -1.16
LINC01550-205ENST00000556138 USP17L2Q6R6M4 530 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 USP17L1Q7RTZ2 530 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
LINC01550-205ENST00000556138 ATP9BO43861 1147 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 INHAP05111 366 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 PHKA2P46019 1235 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 GTF2IP78347 998 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 KRT76Q01546 638 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 ESCO1Q5FWF5 840 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 VWA5B2Q8N398 1253 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 ZSCAN10Q96SZ4 725 aaPredicted RBP7.77□□□□□ -1.17
LINC01550-205ENST00000556138 SERTAD1Q9UHV2 236 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 KIAA1024Q9UPX6 916 aa7.77□□□□□ -1.17
LINC01550-205ENST00000556138 CDC14CA4D256 554 aa7.76□□□□□ -1.17
LINC01550-205ENST00000556138 WASLO00401 505 aaPredicted RBP7.76□□□□□ -1.17
LINC01550-205ENST00000556138 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
LINC01550-205ENST00000556138 TLR1Q15399 786 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms