RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
ATXN3-235ENST00000556082 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-235ENST00000556082 SEPT9Q9UHD8 586 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-235ENST00000556082 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 ATAD2Q6PL18 1390 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 ANKRD36BQ8N2N9 1353 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 NEFLP07196 543 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 BCAMP50895 628 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 LRCH3Q96II8 777 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 POGKQ9P215 609 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 STK26Q9P289 416 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
ATXN3-235ENST00000556082 TECPR2O15040 1411 aa11.09□□□□□ -0.63
ATXN3-235ENST00000556082 NSD2O96028 1365 aa11.08□□□□□ -0.64
ATXN3-235ENST00000556082 BLMP54132 1417 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-235ENST00000556082 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
ATXN3-235ENST00000556082 USP32Q8NFA0 1604 aa11.07□□□□□ -0.64
ATXN3-235ENST00000556082 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
ATXN3-235ENST00000556082 PLEKHG1Q9ULL1 1385 aa11.06□□□□□ -0.64
ATXN3-235ENST00000556082 A0A0G2JS52 829 aa11.06□□□□□ -0.64
ATXN3-235ENST00000556082 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
ATXN3-235ENST00000556082 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
ATXN3-235ENST00000556082 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
ATXN3-235ENST00000556082 POLR3AO14802 1390 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-235ENST00000556082 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
ATXN3-235ENST00000556082 UBR1Q8IWV7 1749 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 CDK19Q9BWU1 502 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 NRXN3Q9Y4C0 1643 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
ATXN3-235ENST00000556082 SLIT1O75093 1534 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 METP08581 1390 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 CEBPAP49715 358 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-235ENST00000556082 SRPK2P78362 688 aaKnown RBP11.04□□□□□ -0.64
ATXN3-235ENST00000556082 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-235ENST00000556082 NGEFQ8N5V2 710 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 ADAMTS8Q9UP79 889 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 MED14O60244 1454 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
ATXN3-235ENST00000556082 ADAMTS13Q76LX8 1427 aa11.03□□□□□ -0.64
ATXN3-235ENST00000556082 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
ATXN3-235ENST00000556082 MORC1Q86VD1 984 aa11.03□□□□□ -0.64
ATXN3-235ENST00000556082 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
ATXN3-235ENST00000556082 TATDN2Q93075 761 aa11.03□□□□□ -0.64
ATXN3-235ENST00000556082 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
ATXN3-235ENST00000556082 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-235ENST00000556082 LTKP29376 864 aa11.02□□□□□ -0.65
ATXN3-235ENST00000556082 SAFB2Q14151 953 aaKnown RBP eCLIP11.02□□□□□ -0.65
ATXN3-235ENST00000556082 WDR43Q15061 677 aaKnown RBP eCLIP11.02□□□□□ -0.65
ATXN3-235ENST00000556082 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
ATXN3-235ENST00000556082 C3P01024 1663 aa11.01□□□□□ -0.65
ATXN3-235ENST00000556082 WASLO00401 505 aaPredicted RBP11.01□□□□□ -0.65
ATXN3-235ENST00000556082 PPP4CP60510 307 aa11.01□□□□□ -0.65
ATXN3-235ENST00000556082 KCNC4Q03721 635 aa11.01□□□□□ -0.65
ATXN3-235ENST00000556082 WAPLQ7Z5K2 1190 aa11.01□□□□□ -0.65
ATXN3-235ENST00000556082 A0A1W2PP64 1363 aa11.01□□□□□ -0.65
ATXN3-235ENST00000556082 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
ATXN3-235ENST00000556082 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
ATXN3-235ENST00000556082 NECTIN2Q92692 538 aa11□□□□□ -0.65
ATXN3-235ENST00000556082 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
ATXN3-235ENST00000556082 PLEKHH1Q9ULM0 1364 aa11□□□□□ -0.65
ATXN3-235ENST00000556082 CPS1P31327 1500 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 ATP7BP35670 1465 aa10.99□□□□□ -0.65
ATXN3-235ENST00000556082 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
ATXN3-235ENST00000556082 BCANQ96GW7 911 aa10.98□□□□□ -0.65
ATXN3-235ENST00000556082 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-235ENST00000556082 FYB1O15117 783 aa10.97□□□□□ -0.65
ATXN3-235ENST00000556082 CFAP53Q96M91 514 aa10.97□□□□□ -0.65
ATXN3-235ENST00000556082 ZNF521Q96K83 1311 aa10.97□□□□□ -0.65
ATXN3-235ENST00000556082 CPSF1Q10570 1443 aaKnown RBP10.97□□□□□ -0.65
ATXN3-235ENST00000556082 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 ROBO2Q9HCK4 1378 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 MTHFSP49914 203 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 SAMD7Q7Z3H4 446 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
ATXN3-235ENST00000556082 DIP2AQ14689 1571 aa10.95□□□□□ -0.66
ATXN3-235ENST00000556082 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
ATXN3-235ENST00000556082 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
ATXN3-235ENST00000556082 PTCH1Q13635 1447 aa10.94□□□□□ -0.66
ATXN3-235ENST00000556082 SMAPO00193 183 aa10.94□□□□□ -0.66
ATXN3-235ENST00000556082 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
ATXN3-235ENST00000556082 ADAMTSL3P82987 1691 aa10.94□□□□□ -0.66
ATXN3-235ENST00000556082 ADGRB2O60241 1585 aa10.94□□□□□ -0.66
ATXN3-235ENST00000556082 PTPRUQ92729 1446 aa10.93□□□□□ -0.66
ATXN3-235ENST00000556082 PLEKHG3A1L390 1219 aa10.93□□□□□ -0.66
ATXN3-235ENST00000556082 TRMT2AQ8IZ69 625 aaKnown RBP10.93□□□□□ -0.66
ATXN3-235ENST00000556082 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
ATXN3-235ENST00000556082 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
ATXN3-235ENST00000556082 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 PNPLA6Q8IY17 1366 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms