RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 LMO7Q8WWI1 1683 aa12.63□□□□□ -0.39
HNRNPC-220ENST00000555585 CAMTA1Q9Y6Y1 1673 aa12.63□□□□□ -0.39
HNRNPC-220ENST00000555585 COL14A1Q05707 1796 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 E9PSI1 815 aa12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 EVA1CP58658 441 aa12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
HNRNPC-220ENST00000555585 FAM83GA6ND36 823 aa12.61□□□□□ -0.39
HNRNPC-220ENST00000555585 MTHFSDQ2M296 383 aaKnown RBP12.61□□□□□ -0.39
HNRNPC-220ENST00000555585 CHRDL2Q6WN34 429 aa12.61□□□□□ -0.39
HNRNPC-220ENST00000555585 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
HNRNPC-220ENST00000555585 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
HNRNPC-220ENST00000555585 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
HNRNPC-220ENST00000555585 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 JCADQ9P266 1359 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 CALD1Q05682 793 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 RAPGEF4Q8WZA2 1011 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 NCAPD2Q15021 1401 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 WDR17Q8IZU2 1322 aa12.59□□□□□ -0.39
HNRNPC-220ENST00000555585 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 IL16Q14005 1332 aa12.58□□□□□ -0.4
HNRNPC-220ENST00000555585 DCTN1Q14203 1278 aa12.57□□□□□ -0.4
HNRNPC-220ENST00000555585 AMOTQ4VCS5 1084 aa12.57□□□□□ -0.4
HNRNPC-220ENST00000555585 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
HNRNPC-220ENST00000555585 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
HNRNPC-220ENST00000555585 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
HNRNPC-220ENST00000555585 HSPA1LP34931 641 aa12.56□□□□□ -0.4
HNRNPC-220ENST00000555585 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-220ENST00000555585 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-220ENST00000555585 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
HNRNPC-220ENST00000555585 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 NEFLP07196 543 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 GNAI1P63096 354 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 MCM10Q7L590 875 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 RCAN3Q9UKA8 241 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
HNRNPC-220ENST00000555585 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-220ENST00000555585 SPG7Q9UQ90 795 aa12.54□□□□□ -0.4
HNRNPC-220ENST00000555585 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-220ENST00000555585 CRB1P82279 1406 aa12.54□□□□□ -0.4
HNRNPC-220ENST00000555585 MEGF6O75095 1541 aa12.53□□□□□ -0.4
HNRNPC-220ENST00000555585 AKAP4Q5JQC9 854 aa12.53□□□□□ -0.4
HNRNPC-220ENST00000555585 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
HNRNPC-220ENST00000555585 SPATA31A6Q5VVP1 1343 aa12.53□□□□□ -0.4
HNRNPC-220ENST00000555585 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
HNRNPC-220ENST00000555585 NRAPQ86VF7 1730 aa12.52□□□□□ -0.41
HNRNPC-220ENST00000555585 USP35Q9P2H5 1018 aa12.52□□□□□ -0.41
HNRNPC-220ENST00000555585 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 IL2RBP14784 551 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.51□□□□□ -0.416e-12■■■□□ 16.8
HNRNPC-220ENST00000555585 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
HNRNPC-220ENST00000555585 ZNF853P0CG23 659 aa12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 MEX3CQ5U5Q3 659 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 LRRC37A3O60309 1634 aa12.5□□□□□ -0.41
HNRNPC-220ENST00000555585 OVOS2A0A0G2JMS6 1433 aa12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 ZCRB1Q8TBF4 217 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
HNRNPC-220ENST00000555585 LRP6O75581 1613 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 SLIT2O94813 1529 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 CHL1O00533 1208 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 PHKG2P15735 406 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 TEFQ10587 303 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 FKBP8Q14318 412 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
HNRNPC-220ENST00000555585 WNK3Q9BYP7 1800 aa12.47□□□□□ -0.41
HNRNPC-220ENST00000555585 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-220ENST00000555585 RRP1P56182 461 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-220ENST00000555585 TAF7Q15545 349 aaPredicted RBP12.47□□□□□ -0.41
HNRNPC-220ENST00000555585 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
HNRNPC-220ENST00000555585 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
HNRNPC-220ENST00000555585 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms