RNA–Protein interactions for RNA: ENST00000555415.1

MLH3-207, Transcript of mutL homolog 3, humanhuman

TSL 2

Gene MLH3, Length 700 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-207ENST00000555415 PKDCCQ504Y2 493 aa11.33□□□□□ -0.6
MLH3-207ENST00000555415 TRAF7Q6Q0C0 670 aa11.33□□□□□ -0.6
MLH3-207ENST00000555415 AVPP01185 164 aa11.32□□□□□ -0.6
MLH3-207ENST00000555415 PLEKHM2Q8IWE5 1019 aa11.32□□□□□ -0.6
MLH3-207ENST00000555415 KLF16Q9BXK1 252 aaPredicted RBP11.32□□□□□ -0.6
MLH3-207ENST00000555415 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
MLH3-207ENST00000555415 MAFBQ9Y5Q3 323 aaPredicted RBP11.32□□□□□ -0.6
MLH3-207ENST00000555415 WDR4P57081 412 aaKnown RBP11.31□□□□□ -0.6
MLH3-207ENST00000555415 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
MLH3-207ENST00000555415 TMPRSS4Q9NRS4 437 aa11.31□□□□□ -0.6
MLH3-207ENST00000555415 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 ZIC2O95409 532 aaPredicted RBP11.3□□□□□ -0.6
MLH3-207ENST00000555415 TIMP2P16035 220 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 MYT1Q01538 1121 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 TSGA10IPQ3SY00 556 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
MLH3-207ENST00000555415 EML3Q32P44 896 aa11.29□□□□□ -0.6
MLH3-207ENST00000555415 OXLD1Q5BKU9 147 aa11.29□□□□□ -0.6
MLH3-207ENST00000555415 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
MLH3-207ENST00000555415 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
MLH3-207ENST00000555415 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
MLH3-207ENST00000555415 CDCA7Q9BWT1 371 aaPredicted RBP11.29□□□□□ -0.6
MLH3-207ENST00000555415 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
MLH3-207ENST00000555415 USP4Q13107 963 aa11.28□□□□□ -0.6
MLH3-207ENST00000555415 NCOA4Q13772 614 aa11.28□□□□□ -0.6
MLH3-207ENST00000555415 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
MLH3-207ENST00000555415 CYLDQ9NQC7 956 aa11.28□□□□□ -0.6
MLH3-207ENST00000555415 TOP2AP11388 1531 aaKnown RBP11.28□□□□□ -0.6
MLH3-207ENST00000555415 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
MLH3-207ENST00000555415 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
MLH3-207ENST00000555415 LILRA1O75019 489 aa11.26□□□□□ -0.61
MLH3-207ENST00000555415 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
MLH3-207ENST00000555415 SCTRP47872 440 aa11.26□□□□□ -0.61
MLH3-207ENST00000555415 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
MLH3-207ENST00000555415 DEPDC4Q8N2C3 294 aa11.26□□□□□ -0.61
MLH3-207ENST00000555415 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
MLH3-207ENST00000555415 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
MLH3-207ENST00000555415 CAPN5O15484 640 aaPredicted RBP11.25□□□□□ -0.61
MLH3-207ENST00000555415 CRIPAKQ8N1N5 446 aa11.25□□□□□ -0.61
MLH3-207ENST00000555415 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
MLH3-207ENST00000555415 Q6ZVU0 165 aa11.24□□□□□ -0.61
MLH3-207ENST00000555415 TRIM50Q86XT4 487 aa11.23□□□□□ -0.61
MLH3-207ENST00000555415 ARHGEF11O15085 1522 aa11.23□□□□□ -0.61
MLH3-207ENST00000555415 RIMBP3CA6NJZ7 1639 aa11.23□□□□□ -0.61
MLH3-207ENST00000555415 RIMBP3BA6NNM3 1639 aa11.23□□□□□ -0.61
MLH3-207ENST00000555415 RIMBP3Q9UFD9 1639 aa11.23□□□□□ -0.61
MLH3-207ENST00000555415 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
MLH3-207ENST00000555415 CYP2U1Q7Z449 544 aa11.22□□□□□ -0.61
MLH3-207ENST00000555415 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
MLH3-207ENST00000555415 ARID3AQ99856 593 aa11.22□□□□□ -0.61
MLH3-207ENST00000555415 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
MLH3-207ENST00000555415 AXIN1O15169 862 aa11.21□□□□□ -0.61
MLH3-207ENST00000555415 ADH1AP07327 375 aa11.21□□□□□ -0.61
MLH3-207ENST00000555415 RFX1P22670 979 aa11.21□□□□□ -0.61
MLH3-207ENST00000555415 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
MLH3-207ENST00000555415 CBLBQ13191 982 aa11.21□□□□□ -0.61
MLH3-207ENST00000555415 MKRN1Q9UHC7 482 aaKnown RBP11.21□□□□□ -0.61
MLH3-207ENST00000555415 ATP1A2P50993 1020 aa11.2□□□□□ -0.62
MLH3-207ENST00000555415 KANK4Q5T7N3 995 aaPredicted RBP11.19□□□□□ -0.62
MLH3-207ENST00000555415 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
MLH3-207ENST00000555415 VRTNQ9H8Y1 702 aa11.19□□□□□ -0.62
MLH3-207ENST00000555415 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
MLH3-207ENST00000555415 CCDC88BA6NC98 1476 aa11.19□□□□□ -0.62
MLH3-207ENST00000555415 GTF2IP78347 998 aa11.18□□□□□ -0.62
MLH3-207ENST00000555415 TSEN34Q9BSV6 310 aaKnown RBP11.18□□□□□ -0.62
MLH3-207ENST00000555415 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.17□□□□□ -0.62
MLH3-207ENST00000555415 UPP2O95045 317 aa11.17□□□□□ -0.62
MLH3-207ENST00000555415 Q6ZNB5 142 aa11.17□□□□□ -0.62
MLH3-207ENST00000555415 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
MLH3-207ENST00000555415 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
MLH3-207ENST00000555415 GNRH1P01148 92 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
MLH3-207ENST00000555415 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 LINC00528Q8N1L1 170 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 OGFOD1Q8N543 542 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 PCDHGA11Q9Y5H2 935 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
MLH3-207ENST00000555415 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
MLH3-207ENST00000555415 RASA1P20936 1047 aa11.15□□□□□ -0.62
MLH3-207ENST00000555415 PTGIRP43119 386 aa11.15□□□□□ -0.62
MLH3-207ENST00000555415 CLDN10P78369 228 aa11.15□□□□□ -0.62
MLH3-207ENST00000555415 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
MLH3-207ENST00000555415 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
MLH3-207ENST00000555415 DNAAF2Q9NVR5 837 aaKnown RBP11.15□□□□□ -0.62
MLH3-207ENST00000555415 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
MLH3-207ENST00000555415 PSME1Q06323 249 aa11.14□□□□□ -0.63
MLH3-207ENST00000555415 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
MLH3-207ENST00000555415 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
MLH3-207ENST00000555415 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
MLH3-207ENST00000555415 ARAP1Q96P48 1450 aa11.13□□□□□ -0.63
MLH3-207ENST00000555415 RELBQ01201 579 aa11.13□□□□□ -0.63
MLH3-207ENST00000555415 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.63
MLH3-207ENST00000555415 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
MLH3-207ENST00000555415 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
MLH3-207ENST00000555415 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
MLH3-207ENST00000555415 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms