RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 DMTNQ08495 405 aa10.77□□□□□ -0.69
SYNE2-217ENST00000555022 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.69
SYNE2-217ENST00000555022 CKAP2LQ8IYA6 745 aa10.77□□□□□ -0.69
SYNE2-217ENST00000555022 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.69
SYNE2-217ENST00000555022 ERC2O15083 957 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 CHMP4BQ9H444 224 aaKnown RBP10.76□□□□□ -0.69
SYNE2-217ENST00000555022 TTC37Q6PGP7 1564 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 A0A1W2PP64 1363 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 A0A087WWV3 80 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 PTGS1P23219 599 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 UNC5CLQ8IV45 518 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 TCEANC2Q96MN5 208 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
SYNE2-217ENST00000555022 REC8O95072 547 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 IL25Q9H293 177 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 MAST1Q9Y2H9 1570 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 AP5Z1O43299 807 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 G2E3Q7L622 706 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 ABCA8O94911 1581 aa10.75□□□□□ -0.69
SYNE2-217ENST00000555022 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 CLTCL1P53675 1640 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 CEP152O94986 1710 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 MBD3O95983 291 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 NME9Q86XW9 330 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 CHAF1AQ13111 956 aaPredicted RBP10.74□□□□□ -0.69
SYNE2-217ENST00000555022 WAPLQ7Z5K2 1190 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 NRBP1Q9UHY1 535 aa10.74□□□□□ -0.69
SYNE2-217ENST00000555022 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 CEP85Q6P2H3 762 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 CDC42BPBQ9Y5S2 1711 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 MSH6P52701 1360 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-217ENST00000555022 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-217ENST00000555022 CWC22Q9HCG8 908 aaKnown RBP10.73□□□□□ -0.69
SYNE2-217ENST00000555022 SPG7Q9UQ90 795 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 NECAB1Q8N987 351 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 DCTPP1Q9H773 170 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
SYNE2-217ENST00000555022 IQGAP1P46940 1657 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 CEBPZQ03701 1054 aaKnown RBP10.72□□□□□ -0.69
SYNE2-217ENST00000555022 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
SYNE2-217ENST00000555022 HS1BP3Q53T59 392 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 LUZP1Q86V48 1076 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 PIBF1Q8WXW3 757 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 SHPRHQ149N8 1683 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
SYNE2-217ENST00000555022 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
SYNE2-217ENST00000555022 API5Q9BZZ5 524 aaKnown RBP10.72□□□□□ -0.69
SYNE2-217ENST00000555022 CT47B1P0C2W7 299 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-217ENST00000555022 GNAI1P63096 354 aa10.71□□□□□ -0.69
SYNE2-217ENST00000555022 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
SYNE2-217ENST00000555022 TFIP11Q9UBB9 837 aaKnown RBP10.71□□□□□ -0.69
SYNE2-217ENST00000555022 BRD1O95696 1058 aa10.71□□□□□ -0.69
SYNE2-217ENST00000555022 PDE1AP54750 535 aa10.71□□□□□ -0.69
SYNE2-217ENST00000555022 HDGFL2Q7Z4V5 671 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-217ENST00000555022 TRMT1Q9NXH9 659 aaKnown RBP10.71□□□□□ -0.69
SYNE2-217ENST00000555022 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
SYNE2-217ENST00000555022 ZMYM3Q14202 1370 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 RNF17Q9BXT8 1623 aaKnown RBP10.71□□□□□ -0.7
SYNE2-217ENST00000555022 FOXO3O43524 673 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 FGD1P98174 961 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 POLKQ9UBT6 870 aa10.71□□□□□ -0.7
SYNE2-217ENST00000555022 ARHGEF5Q12774 1597 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 LARGE1O95461 756 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 CDK11BP21127 795 aaKnown RBP10.7□□□□□ -0.7
SYNE2-217ENST00000555022 STK3Q13188 491 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 CCDC186Q7Z3E2 898 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 CDK19Q9BWU1 502 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 C14orf93Q9H972 538 aaKnown RBP10.7□□□□□ -0.7
SYNE2-217ENST00000555022 DUOX2Q9NRD8 1548 aa10.7□□□□□ -0.7
SYNE2-217ENST00000555022 MCCP23508 829 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 ARID5BQ14865 1188 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 ANKRD44Q8N8A2 993 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 IBTKQ9P2D0 1353 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 KCNJ4P48050 445 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 TERF1P54274 439 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 CWC27Q6UX04 472 aaKnown RBP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 MTERF4Q7Z6M4 381 aaKnown RBP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 ERCC4Q92889 916 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-217ENST00000555022 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 CFAP74Q9C0B2 1584 aa10.69□□□□□ -0.7
SYNE2-217ENST00000555022 PNMA6EA0A0J9YXQ4 647 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 CLEC17AQ6ZS10 378 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 IQGAP3Q86VI3 1631 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 ABCC4O15439 1325 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 CCDC183Q5T5S1 534 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
SYNE2-217ENST00000555022 TRIM5Q9C035 493 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms