RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 LIG1P18858 919 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 SH3BP5O60239 455 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 SMC5Q8IY18 1101 aa9.33□□□□□ -0.92
TGFB3-202ENST00000554980 ERBB3P21860 1342 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 ANKRD23Q86SG2 305 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 DDX17Q92841 729 aaKnown RBP9.32□□□□□ -0.92
TGFB3-202ENST00000554980 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 RPGRIP1LQ68CZ1 1315 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 HMGB1P1B2RPK0 211 aaPredicted RBP9.32□□□□□ -0.92
TGFB3-202ENST00000554980 ZNF500O60304 480 aaPredicted RBP9.32□□□□□ -0.92
TGFB3-202ENST00000554980 MTA1Q13330 715 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 WDR78Q5VTH9 848 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 SREK1Q8WXA9 508 aaKnown RBP9.32□□□□□ -0.92
TGFB3-202ENST00000554980 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
TGFB3-202ENST00000554980 ZKSCAN2Q63HK3 967 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
TGFB3-202ENST00000554980 ZNF513Q8N8E2 541 aaPredicted RBP9.31□□□□□ -0.92
TGFB3-202ENST00000554980 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 CDCA7Q9BWT1 371 aaPredicted RBP9.31□□□□□ -0.92
TGFB3-202ENST00000554980 STK26Q9P289 416 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 ANKRD30BQ9BXX2 1392 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 MED1Q15648 1581 aaPredicted RBP9.31□□□□□ -0.92
TGFB3-202ENST00000554980 PMM1Q92871 262 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 VTI1AQ96AJ9 217 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
TGFB3-202ENST00000554980 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
TGFB3-202ENST00000554980 WAPLQ7Z5K2 1190 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 FEZ2Q9UHY8 353 aaPredicted RBP9.3□□□□□ -0.92
TGFB3-202ENST00000554980 ASXL1Q8IXJ9 1541 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 FLIIQ13045 1269 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 NBPF6Q5VWK0 638 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
TGFB3-202ENST00000554980 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
TGFB3-202ENST00000554980 NBPF4Q96M43 638 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 FRMD4BQ9Y2L6 1034 aa9.3□□□□□ -0.92
TGFB3-202ENST00000554980 NALCNQ8IZF0 1738 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 KCNA1Q09470 495 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 CFAP70Q5T0N1 1121 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 BRINP3Q76B58 766 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 GPATCH3Q96I76 525 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 METTL14Q9HCE5 456 aaKnown RBP9.29□□□□□ -0.92
TGFB3-202ENST00000554980 ATF3P18847 181 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 ARHGEF10LQ9HCE6 1279 aa9.29□□□□□ -0.92
TGFB3-202ENST00000554980 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 NGEFQ8N5V2 710 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 KDM4CQ9H3R0 1056 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 RGS17Q9UGC6 210 aaPredicted RBP9.28□□□□□ -0.92
TGFB3-202ENST00000554980 PIK3C2GO75747 1445 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 NCOA3Q9Y6Q9 1424 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 PARNO95453 639 aaKnown RBP9.28□□□□□ -0.92
TGFB3-202ENST00000554980 MAP2K1Q02750 393 aaPredicted RBP9.28□□□□□ -0.92
TGFB3-202ENST00000554980 MST1RQ04912 1400 aa9.28□□□□□ -0.92
TGFB3-202ENST00000554980 NUTM2FA1L443 756 aa9.27□□□□□ -0.93
TGFB3-202ENST00000554980 CCDC97Q96F63 343 aaPredicted RBP9.27□□□□□ -0.93
TGFB3-202ENST00000554980 ORAI2Q96SN7 254 aa9.27□□□□□ -0.93
TGFB3-202ENST00000554980 PHLPP1O60346 1717 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 ADGRL3Q9HAR2 1447 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 CCDC194A0A1B0GVG4 234 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 ZMYND10O75800 440 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 SPOCK3Q9BQ16 436 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 ZRANB2O95218 330 aaKnown RBP eCLIP9.26□□□□□ -0.93
TGFB3-202ENST00000554980 HSP90AA1P07900 732 aaKnown RBP9.26□□□□□ -0.93
TGFB3-202ENST00000554980 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
TGFB3-202ENST00000554980 DHX57Q6P158 1386 aaKnown RBP9.26□□□□□ -0.93
TGFB3-202ENST00000554980 COL16A1Q07092 1604 aaPredicted RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 BDNFP23560 247 aa9.25□□□□□ -0.93
TGFB3-202ENST00000554980 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 PTCH1Q13635 1447 aa9.25□□□□□ -0.93
TGFB3-202ENST00000554980 CCDC85AQ96PX6 553 aaPredicted RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 BSDC1Q9NW68 430 aaPredicted RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 PPP1R1BQ9UD71 204 aaPredicted RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 NRXN1Q9ULB1 1477 aa9.25□□□□□ -0.93
TGFB3-202ENST00000554980 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
TGFB3-202ENST00000554980 YY1AP1Q9H869 796 aa9.25□□□□□ -0.93
TGFB3-202ENST00000554980 RAI14Q9P0K7 980 aa9.25□□□□□ -0.93
TGFB3-202ENST00000554980 SSR1P43307 286 aaKnown RBP9.24□□□□□ -0.93
TGFB3-202ENST00000554980 ZKSCAN8Q15776 578 aaPredicted RBP9.24□□□□□ -0.93
TGFB3-202ENST00000554980 GEMIN8Q9NWZ8 242 aaKnown RBP9.24□□□□□ -0.93
TGFB3-202ENST00000554980 C1orf167Q5SNV9 1468 aa9.24□□□□□ -0.93
TGFB3-202ENST00000554980 PUS10Q3MIT2 529 aaKnown RBP9.24□□□□□ -0.93
TGFB3-202ENST00000554980 BORCS6Q96GS4 357 aa9.24□□□□□ -0.93
TGFB3-202ENST00000554980 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
TGFB3-202ENST00000554980 LRPPRCP42704 1394 aaKnown RBP9.23□□□□□ -0.93
TGFB3-202ENST00000554980 FAM43AQ8N2R8 423 aa9.23□□□□□ -0.93
TGFB3-202ENST00000554980 SIN3AQ96ST3 1273 aa9.23□□□□□ -0.93
TGFB3-202ENST00000554980 DCCP43146 1447 aa9.23□□□□□ -0.93
TGFB3-202ENST00000554980 YTHDC2Q9H6S0 1430 aaKnown RBP9.23□□□□□ -0.93
TGFB3-202ENST00000554980 LRP6O75581 1613 aa9.23□□□□□ -0.93
TGFB3-202ENST00000554980 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
TGFB3-202ENST00000554980 TAF3Q5VWG9 929 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms