RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ZMYND15	Q9H091	742 aa		10.18	□□□□□ -0.78
PSMC6-208	ENST00000554956	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.18	□□□□□ -0.78
PSMC6-208	ENST00000554956	UNC13A	Q9UPW8	1703 aa		10.18	□□□□□ -0.78
PSMC6-208	ENST00000554956	UPP2	O95045	317 aa		10.17	□□□□□ -0.78
PSMC6-208	ENST00000554956	OSBPL3	Q9H4L5	887 aa		10.17	□□□□□ -0.78
PSMC6-208	ENST00000554956	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.17	□□□□□ -0.78
PSMC6-208	ENST00000554956	SENP2	Q9HC62	589 aa		10.17	□□□□□ -0.78
PSMC6-208	ENST00000554956	SOBP	A7XYQ1	873 aa		10.16	□□□□□ -0.78
PSMC6-208	ENST00000554956	SKI	P12755	728 aa		10.16	□□□□□ -0.78
PSMC6-208	ENST00000554956	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.16	□□□□□ -0.78
PSMC6-208	ENST00000554956	INSM2	Q96T92	566 aa	Predicted RBP	10.15	□□□□□ -0.78
PSMC6-208	ENST00000554956	SPINT1	O43278	529 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	PTGIR	P43119	386 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	TBC1D9	Q6ZT07	1266 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	C14orf37	Q86TY3	774 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	DEPDC4	Q8N2C3	294 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	KIFC2	Q96AC6	838 aa		10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	CALR3	Q96L12	384 aa	Known RBP	10.14	□□□□□ -0.79
PSMC6-208	ENST00000554956	ATP5J2-PTCD1	G3V325	749 aa		10.13	□□□□□ -0.79
PSMC6-208	ENST00000554956	MYC	P01106	439 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMC6-208	ENST00000554956	CTSO	P43234	321 aa	Predicted RBP	10.13	□□□□□ -0.79
PSMC6-208	ENST00000554956	USP17L5	A8MUK1	530 aa		10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	STAU1	O95793	577 aa	Known RBP	10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	MAP7D1	Q3KQU3	841 aa		10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	CYP2U1	Q7Z449	544 aa		10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	ESF1	Q9H501	851 aa	Known RBP	10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	RAB6B	Q9NRW1	208 aa		10.12	□□□□□ -0.79
PSMC6-208	ENST00000554956	SOS2	Q07890	1332 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMC6-208	ENST00000554956	NFATC2IP	Q8NCF5	419 aa		10.11	□□□□□ -0.79
PSMC6-208	ENST00000554956	ARHGEF10L	Q9HCE6	1279 aa		10.11	□□□□□ -0.79
PSMC6-208	ENST00000554956	POLM	Q9NP87	494 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMC6-208	ENST00000554956	TTLL8	A6PVC2	850 aa		10.1	□□□□□ -0.79
PSMC6-208	ENST00000554956	USP4	Q13107	963 aa		10.1	□□□□□ -0.79
PSMC6-208	ENST00000554956	NCOA4	Q13772	614 aa		10.1	□□□□□ -0.79
PSMC6-208	ENST00000554956	TRIM52	Q96A61	297 aa		10.1	□□□□□ -0.79
PSMC6-208	ENST00000554956	DNMT3L	Q9UJW3	386 aa		10.1	□□□□□ -0.79
PSMC6-208	ENST00000554956	DCAF1	Q9Y4B6	1507 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956		A0A1W2PRU2	124 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	FIGNL2	A6NMB9	653 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	MEN1	O00255	615 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	ATP9B	O43861	1147 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	MAN1A2	O60476	641 aa		10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.09	□□□□□ -0.79
PSMC6-208	ENST00000554956	USP17L3	A6NCW0	530 aa		10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	USP17L4	A6NCW7	530 aa		10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	EML3	Q32P44	896 aa		10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	USP17L2	Q6R6M4	530 aa		10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	USP17L1	Q7RTZ2	530 aa		10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	TFIP11	Q9UBB9	837 aa	Known RBP	10.08	□□□□□ -0.8
PSMC6-208	ENST00000554956	ARID3C	A6NKF2	412 aa		10.07	□□□□□ -0.8
PSMC6-208	ENST00000554956	PALM3	A6NDB9	673 aa	Predicted RBP	10.06	□□□□□ -0.8
PSMC6-208	ENST00000554956	RNF217	Q8TC41	542 aa		10.06	□□□□□ -0.8
PSMC6-208	ENST00000554956	IL2RA	P01589	272 aa		10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	CLN3	Q13286	438 aa		10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	SIRT1	Q96EB6	747 aa		10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	PPP1R12C	Q9BZL4	782 aa		10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	ETNK1	Q9HBU6	452 aa		10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.05	□□□□□ -0.8
PSMC6-208	ENST00000554956	GNRH1	P01148	92 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	GTF2I	P78347	998 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	PLEKHM2	Q8IWE5	1019 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	NOD1	Q9Y239	953 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	PCDHGA11	Q9Y5H2	935 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	SCRIB	Q14160	1630 aa		10.04	□□□□□ -0.8
PSMC6-208	ENST00000554956	SCNN1D	P51172	638 aa		10.03	□□□□□ -0.8
PSMC6-208	ENST00000554956	CNKSR1	Q969H4	720 aa		10.03	□□□□□ -0.8
PSMC6-208	ENST00000554956	ZNF775	Q96BV0	537 aa	Predicted RBP	10.03	□□□□□ -0.8
PSMC6-208	ENST00000554956	NLRP3	Q96P20	1036 aa		10.03	□□□□□ -0.8
PSMC6-208	ENST00000554956	TIMELESS	Q9UNS1	1208 aa		10.02	□□□□□ -0.81
PSMC6-208	ENST00000554956	LZTS3	O60299	673 aa	Predicted RBP	10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	RNF144A	P50876	292 aa	Predicted RBP	10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	GDF10	P55107	478 aa		10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.01	□□□□□ -0.81	7e-9	■■■■□ 21.1
PSMC6-208	ENST00000554956	MKRN1	Q9UHC7	482 aa	Known RBP	10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	KIAA1024	Q9UPX6	916 aa		10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	CECR2	Q9BXF3	1484 aa		10.01	□□□□□ -0.81
PSMC6-208	ENST00000554956	LMOD1	P29536	600 aa	Predicted RBP	10	□□□□□ -0.81
PSMC6-208	ENST00000554956	VEGFB	P49765	207 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	CLDN10	P78369	228 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	PSME1	Q06323	249 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	CFAP70	Q5T0N1	1121 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	PRICKLE2	Q7Z3G6	844 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	XAGE2	Q96GT9	111 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	ESYT1	Q9BSJ8	1104 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	HRH3	Q9Y5N1	445 aa		10	□□□□□ -0.81
PSMC6-208	ENST00000554956	TMEM229A	B2RXF0	380 aa		9.99	□□□□□ -0.81
PSMC6-208	ENST00000554956	RHOQ	P17081	205 aa		9.99	□□□□□ -0.81
PSMC6-208	ENST00000554956	C1orf115	Q9H7X2	142 aa		9.99	□□□□□ -0.81
PSMC6-208	ENST00000554956	SERTAD1	Q9UHV2	236 aa		9.99	□□□□□ -0.81
PSMC6-208	ENST00000554956	CC2D2A	Q9P2K1	1620 aa		9.99	□□□□□ -0.81
PSMC6-208	ENST00000554956	SHROOM4	Q9ULL8	1493 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	CENPC	Q03188	943 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	PTS	Q03393	145 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	ESCO1	Q5FWF5	840 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	SLC27A3	Q5K4L6	730 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	LYSMD3	Q7Z3D4	306 aa		9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.98	□□□□□ -0.81
PSMC6-208	ENST00000554956	INHA	P05111	366 aa		9.97	□□□□□ -0.81
PSMC6-208	ENST00000554956	GPC1	P35052	558 aa		9.97	□□□□□ -0.81
PSMC6-208	ENST00000554956	TRIM50	Q86XT4	487 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms