RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-207ENST00000554927 IP6K1Q92551 441 aa18.8■□□□□ 0.6
TUBB3-207ENST00000554927 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
TUBB3-207ENST00000554927 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
TUBB3-207ENST00000554927 USP47Q96K76 1375 aa18.79■□□□□ 0.6
TUBB3-207ENST00000554927 HSPA6P17066 643 aa18.78■□□□□ 0.6
TUBB3-207ENST00000554927 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
TUBB3-207ENST00000554927 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
TUBB3-207ENST00000554927 NSD2O96028 1365 aa18.77■□□□□ 0.6
TUBB3-207ENST00000554927 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.59
TUBB3-207ENST00000554927 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
TUBB3-207ENST00000554927 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
TUBB3-207ENST00000554927 AMPHP49418 695 aa18.74■□□□□ 0.59
TUBB3-207ENST00000554927 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 LY75O60449 1722 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 HOXC9P31274 260 aa18.72■□□□□ 0.59
TUBB3-207ENST00000554927 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
TUBB3-207ENST00000554927 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
TUBB3-207ENST00000554927 A0A1W2PP64 1363 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 COG3Q96JB2 828 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 ADCY9O60503 1353 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 MEGF6O75095 1541 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 HMGB2P26583 209 aaKnown RBP18.69■□□□□ 0.58
TUBB3-207ENST00000554927 FBLN1P23142 703 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 AK7Q96M32 723 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 PHF14O94880 888 aa18.67■□□□□ 0.58
TUBB3-207ENST00000554927 PALLDQ8WX93 1383 aa18.67■□□□□ 0.58
TUBB3-207ENST00000554927 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
TUBB3-207ENST00000554927 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-207ENST00000554927 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 C5P01031 1676 aa18.64■□□□□ 0.57
TUBB3-207ENST00000554927 KIF3CO14782 793 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
TUBB3-207ENST00000554927 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
TUBB3-207ENST00000554927 APLP1P51693 650 aa18.62■□□□□ 0.57
TUBB3-207ENST00000554927 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
TUBB3-207ENST00000554927 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
TUBB3-207ENST00000554927 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
TUBB3-207ENST00000554927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
TUBB3-207ENST00000554927 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-207ENST00000554927 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
TUBB3-207ENST00000554927 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
TUBB3-207ENST00000554927 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
TUBB3-207ENST00000554927 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-207ENST00000554927 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
TUBB3-207ENST00000554927 SSFA2P28290 1259 aa18.56■□□□□ 0.56
TUBB3-207ENST00000554927 CYP27B1O15528 508 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TOMM70O94826 608 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 GNPATO15228 680 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 PIGBQ92521 554 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 MMP10P09238 476 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 SIK1P57059 783 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 ARHGAP27Q6ZUM4 889 aa18.52■□□□□ 0.56
TUBB3-207ENST00000554927 DNAJC5GQ8N7S2 189 aa18.52■□□□□ 0.56
TUBB3-207ENST00000554927 FYB1O15117 783 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-207ENST00000554927 INSRP06213 1382 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 NMRK2Q9NPI5 230 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 A0A0G2JLW4 131 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 FLT4P35916 1363 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-207ENST00000554927 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 CAPN15O75808 1086 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 TGFB2P61812 414 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 TESK2Q96S53 571 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 FCHSD2O94868 740 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 ITPK1Q13572 414 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 PPM1GO15355 546 aaPredicted RBP18.46■□□□□ 0.55
TUBB3-207ENST00000554927 HTRA3P83110 453 aa18.46■□□□□ 0.55
TUBB3-207ENST00000554927 ITGB4P16144 1822 aa18.46■□□□□ 0.55
TUBB3-207ENST00000554927 TMF1P82094 1093 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms