RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
TUBB3-207ENST00000554927 IP6K1Q92551 441 aa18.8■□□□□ 0.6
TUBB3-207ENST00000554927 COL24A1Q17RW2 1714 aa18.8■□□□□ 0.6
TUBB3-207ENST00000554927 TUBGCP6Q96RT7 1819 aa18.79■□□□□ 0.6
TUBB3-207ENST00000554927 USP47Q96K76 1375 aa18.79■□□□□ 0.6
TUBB3-207ENST00000554927 HSPA6P17066 643 aa18.78■□□□□ 0.6
TUBB3-207ENST00000554927 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
TUBB3-207ENST00000554927 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
TUBB3-207ENST00000554927 NSD2O96028 1365 aa18.77■□□□□ 0.6
TUBB3-207ENST00000554927 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.59
TUBB3-207ENST00000554927 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 EDC4Q6P2E9 1401 aaKnown RBP18.76■□□□□ 0.59
TUBB3-207ENST00000554927 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
TUBB3-207ENST00000554927 NEUROD1Q13562 356 aa18.75■□□□□ 0.59
TUBB3-207ENST00000554927 AMPHP49418 695 aa18.74■□□□□ 0.59
TUBB3-207ENST00000554927 SIN3AQ96ST3 1273 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 WWC3Q9ULE0 1092 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 LY75O60449 1722 aa18.73■□□□□ 0.59
TUBB3-207ENST00000554927 HOXC9P31274 260 aa18.72■□□□□ 0.59
TUBB3-207ENST00000554927 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
TUBB3-207ENST00000554927 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
TUBB3-207ENST00000554927 A0A1W2PP64 1363 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 COG3Q96JB2 828 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
TUBB3-207ENST00000554927 ADCY9O60503 1353 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 MEGF6O75095 1541 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
TUBB3-207ENST00000554927 HMGB2P26583 209 aaKnown RBP18.69■□□□□ 0.58
TUBB3-207ENST00000554927 FBLN1P23142 703 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 RAPGEF4Q8WZA2 1011 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 AK7Q96M32 723 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 IGSF1Q8N6C5 1336 aa18.68■□□□□ 0.58
TUBB3-207ENST00000554927 PHF14O94880 888 aa18.67■□□□□ 0.58
TUBB3-207ENST00000554927 PALLDQ8WX93 1383 aa18.67■□□□□ 0.58
TUBB3-207ENST00000554927 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
TUBB3-207ENST00000554927 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-207ENST00000554927 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
TUBB3-207ENST00000554927 C5P01031 1676 aa18.64■□□□□ 0.57
TUBB3-207ENST00000554927 KIF3CO14782 793 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 RRS1Q15050 365 aaKnown RBP18.63■□□□□ 0.57
TUBB3-207ENST00000554927 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
TUBB3-207ENST00000554927 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
TUBB3-207ENST00000554927 APLP1P51693 650 aa18.62■□□□□ 0.57
TUBB3-207ENST00000554927 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
TUBB3-207ENST00000554927 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
TUBB3-207ENST00000554927 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
TUBB3-207ENST00000554927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.61■□□□□ 0.57
TUBB3-207ENST00000554927 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
TUBB3-207ENST00000554927 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
TUBB3-207ENST00000554927 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
TUBB3-207ENST00000554927 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
TUBB3-207ENST00000554927 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
TUBB3-207ENST00000554927 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
TUBB3-207ENST00000554927 SSFA2P28290 1259 aa18.56■□□□□ 0.56
TUBB3-207ENST00000554927 CYP27B1O15528 508 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TOMM70O94826 608 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 GGNBP2Q9H3C7 697 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
TUBB3-207ENST00000554927 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 GNPATO15228 680 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 PIGBQ92521 554 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
TUBB3-207ENST00000554927 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 MMP10P09238 476 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 SIK1P57059 783 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 LINC00116Q8NCU8 138 aa18.53■□□□□ 0.56
TUBB3-207ENST00000554927 ARHGAP27Q6ZUM4 889 aa18.52■□□□□ 0.56
TUBB3-207ENST00000554927 DNAJC5GQ8N7S2 189 aa18.52■□□□□ 0.56
TUBB3-207ENST00000554927 FYB1O15117 783 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-207ENST00000554927 INSRP06213 1382 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 TOGARAM1Q9Y4F4 1720 aa18.51■□□□□ 0.55
TUBB3-207ENST00000554927 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 NMRK2Q9NPI5 230 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 TMOD3Q9NYL9 352 aa18.5■□□□□ 0.55
TUBB3-207ENST00000554927 A0A0G2JLW4 131 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 ATP6V1AP38606 617 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 FLT4P35916 1363 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
TUBB3-207ENST00000554927 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-207ENST00000554927 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 CAPN15O75808 1086 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 TGFB2P61812 414 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 TESK2Q96S53 571 aa18.48■□□□□ 0.55
TUBB3-207ENST00000554927 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 FCHSD2O94868 740 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 ITPK1Q13572 414 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 ASAP1Q9ULH1 1129 aa18.47■□□□□ 0.55
TUBB3-207ENST00000554927 PPM1GO15355 546 aaPredicted RBP18.46■□□□□ 0.55
TUBB3-207ENST00000554927 HTRA3P83110 453 aa18.46■□□□□ 0.55
TUBB3-207ENST00000554927 ITGB4P16144 1822 aa18.46■□□□□ 0.55
TUBB3-207ENST00000554927 TMF1P82094 1093 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms