RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 EYA1Q99502 592 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
LINC01397-201ENST00000554808 ONECUT3O60422 494 aaPredicted RBP10.74□□□□□ -0.69
LINC01397-201ENST00000554808 WDR43Q15061 677 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01397-201ENST00000554808 DOT1LQ8TEK3 1739 aa10.74□□□□□ -0.69
LINC01397-201ENST00000554808 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 SIPA1L3O60292 1781 aaPredicted RBP10.73□□□□□ -0.69
LINC01397-201ENST00000554808 U2SURPO15042 1029 aaKnown RBP10.73□□□□□ -0.69
LINC01397-201ENST00000554808 FCHSD2O94868 740 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 TATP17735 454 aaPredicted RBP10.73□□□□□ -0.69
LINC01397-201ENST00000554808 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC01397-201ENST00000554808 USP35Q9P2H5 1018 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 MEGF6O75095 1541 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
LINC01397-201ENST00000554808 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
LINC01397-201ENST00000554808 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC01397-201ENST00000554808 AMOTQ4VCS5 1084 aa10.72□□□□□ -0.69
LINC01397-201ENST00000554808 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
LINC01397-201ENST00000554808 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
LINC01397-201ENST00000554808 DDB1Q16531 1140 aa10.71□□□□□ -0.69
LINC01397-201ENST00000554808 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
LINC01397-201ENST00000554808 SULT6B1Q6IMI4 303 aa10.71□□□□□ -0.69
LINC01397-201ENST00000554808 PCDH11XQ9BZA7 1347 aa10.71□□□□□ -0.69
LINC01397-201ENST00000554808 PCDH11YQ9BZA8 1340 aa10.71□□□□□ -0.69
LINC01397-201ENST00000554808 SPG7Q9UQ90 795 aa10.71□□□□□ -0.69
LINC01397-201ENST00000554808 A0A0G2JS52 829 aa10.7□□□□□ -0.7
LINC01397-201ENST00000554808 EXOC5O00471 708 aa10.7□□□□□ -0.7
LINC01397-201ENST00000554808 MYT1Q01538 1121 aa10.7□□□□□ -0.7
LINC01397-201ENST00000554808 BTAF1O14981 1849 aa10.7□□□□□ -0.7
LINC01397-201ENST00000554808 TOGARAM1Q9Y4F4 1720 aa10.7□□□□□ -0.7
LINC01397-201ENST00000554808 BCL9O00512 1426 aa10.69□□□□□ -0.7
LINC01397-201ENST00000554808 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
LINC01397-201ENST00000554808 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
LINC01397-201ENST00000554808 USHBP1Q8N6Y0 703 aa10.69□□□□□ -0.7
LINC01397-201ENST00000554808 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
LINC01397-201ENST00000554808 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
LINC01397-201ENST00000554808 HMOX1P09601 288 aa10.68□□□□□ -0.7
LINC01397-201ENST00000554808 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
LINC01397-201ENST00000554808 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
LINC01397-201ENST00000554808 GAS2L2Q8NHY3 880 aa10.68□□□□□ -0.7
LINC01397-201ENST00000554808 ZCRB1Q8TBF4 217 aaKnown RBP10.68□□□□□ -0.7
LINC01397-201ENST00000554808 RREB1Q92766 1687 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 CACNA1FO60840 1977 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 PRKAR2BP31323 418 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 PDE3BQ13370 1112 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 PNISRQ8TF01 805 aaKnown RBP10.67□□□□□ -0.7
LINC01397-201ENST00000554808 LY75O60449 1722 aa10.67□□□□□ -0.7
LINC01397-201ENST00000554808 C1orf141Q5JVX7 400 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 IFNL2Q8IZJ0 200 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 MIER1Q8N108 512 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 RUNDC1Q96C34 613 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 PAPPAQ13219 1627 aa10.66□□□□□ -0.7
LINC01397-201ENST00000554808 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
LINC01397-201ENST00000554808 NUP188Q5SRE5 1749 aa10.65□□□□□ -0.7
LINC01397-201ENST00000554808 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
LINC01397-201ENST00000554808 PLEKHF1Q96S99 279 aa10.65□□□□□ -0.7
LINC01397-201ENST00000554808 ADAMTS8Q9UP79 889 aa10.65□□□□□ -0.7
LINC01397-201ENST00000554808 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.71
LINC01397-201ENST00000554808 KDM3BQ7LBC6 1761 aa10.65□□□□□ -0.71
LINC01397-201ENST00000554808 MRC1P22897 1456 aa10.64□□□□□ -0.71
LINC01397-201ENST00000554808 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
LINC01397-201ENST00000554808 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
LINC01397-201ENST00000554808 AKAP4Q5JQC9 854 aa10.64□□□□□ -0.71
LINC01397-201ENST00000554808 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
LINC01397-201ENST00000554808 MAP3K5Q99683 1374 aa10.64□□□□□ -0.71
LINC01397-201ENST00000554808 CICQ96RK0 1608 aaPredicted RBP10.63□□□□□ -0.71
LINC01397-201ENST00000554808 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
LINC01397-201ENST00000554808 PHKG2P15735 406 aa10.63□□□□□ -0.71
LINC01397-201ENST00000554808 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
LINC01397-201ENST00000554808 FAM196AQ6ZSG2 479 aa10.63□□□□□ -0.71
LINC01397-201ENST00000554808 GNAT3A8MTJ3 354 aa10.62□□□□□ -0.71
LINC01397-201ENST00000554808 NFE2L2Q16236 605 aa10.62□□□□□ -0.71
LINC01397-201ENST00000554808 MTHFSDQ2M296 383 aaKnown RBP10.62□□□□□ -0.71
LINC01397-201ENST00000554808 FAM9BQ8IZU0 186 aa10.62□□□□□ -0.71
LINC01397-201ENST00000554808 DCAF5Q96JK2 942 aa10.62□□□□□ -0.71
LINC01397-201ENST00000554808 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
LINC01397-201ENST00000554808 CYP27B1O15528 508 aa10.61□□□□□ -0.71
LINC01397-201ENST00000554808 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
LINC01397-201ENST00000554808 DDX54Q8TDD1 881 aaKnown RBP10.61□□□□□ -0.71
LINC01397-201ENST00000554808 RTF1Q92541 710 aaKnown RBP10.61□□□□□ -0.71
LINC01397-201ENST00000554808 ERVV-2B6SEH9 535 aa10.6□□□□□ -0.71
LINC01397-201ENST00000554808 HMGB2P26583 209 aaKnown RBP10.6□□□□□ -0.71
LINC01397-201ENST00000554808 KDM6AO15550 1401 aaPredicted RBP10.59□□□□□ -0.71
LINC01397-201ENST00000554808 COL5A3P25940 1745 aaPredicted RBP10.59□□□□□ -0.71
LINC01397-201ENST00000554808 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
LINC01397-201ENST00000554808 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
LINC01397-201ENST00000554808 CALD1Q05682 793 aaKnown RBP10.59□□□□□ -0.71
LINC01397-201ENST00000554808 CCDC27Q2M243 656 aa10.59□□□□□ -0.71
LINC01397-201ENST00000554808 CCDC146Q8IYE0 955 aa10.59□□□□□ -0.71
LINC01397-201ENST00000554808 PHACTR3Q96KR7 559 aa10.59□□□□□ -0.71
LINC01397-201ENST00000554808 CEMIPQ8WUJ3 1361 aa10.59□□□□□ -0.71
LINC01397-201ENST00000554808 C5P01031 1676 aa10.59□□□□□ -0.71
LINC01397-201ENST00000554808 QSER1Q2KHR3 1735 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms