RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-230ENST00000554673 AKAP12Q02952 1782 aa8.24□□□□□ -1.09
ATXN3-230ENST00000554673 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 SBNO2Q9Y2G9 1366 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 ADGRB2O60241 1585 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 MFSD10Q14728 455 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 LRCH3Q96II8 777 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 LMTK3Q96Q04 1460 aa8.23□□□□□ -1.09
ATXN3-230ENST00000554673 PLEKHG1Q9ULL1 1385 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 SEMA3EO15041 775 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 ZMYND15Q9H091 742 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 TSR3Q9UJK0 312 aaKnown RBP8.22□□□□□ -1.09
ATXN3-230ENST00000554673 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
ATXN3-230ENST00000554673 LRPPRCP42704 1394 aaKnown RBP8.22□□□□□ -1.09
ATXN3-230ENST00000554673 TRIM6-TRIM34B2RNG4 842 aa8.21□□□□□ -1.1
ATXN3-230ENST00000554673 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
ATXN3-230ENST00000554673 FAM98CQ17RN3 349 aaKnown RBP8.21□□□□□ -1.1
ATXN3-230ENST00000554673 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
ATXN3-230ENST00000554673 TRAK1Q9UPV9 953 aa8.21□□□□□ -1.1
ATXN3-230ENST00000554673 FMN2Q9NZ56 1722 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 ANKRD26Q9UPS8 1709 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 NKTRP30414 1462 aaKnown RBP8.2□□□□□ -1.1
ATXN3-230ENST00000554673 DIP2AQ14689 1571 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 LCE2BO14633 110 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 E2F4Q16254 413 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 BARGINQ6ZT62 677 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 WAPLQ7Z5K2 1190 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 CARD14Q9BXL6 1004 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 RSPH6AQ9H0K4 717 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 ABCC11Q96J66 1382 aa8.2□□□□□ -1.1
ATXN3-230ENST00000554673 SHPRHQ149N8 1683 aa8.19□□□□□ -1.1
ATXN3-230ENST00000554673 ONECUT3O60422 494 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-230ENST00000554673 EPAS1Q99814 870 aa8.19□□□□□ -1.1
ATXN3-230ENST00000554673 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
ATXN3-230ENST00000554673 KIF20BQ96Q89 1820 aa8.18□□□□□ -1.1
ATXN3-230ENST00000554673 ATP7BP35670 1465 aa8.18□□□□□ -1.1
ATXN3-230ENST00000554673 DPYSL4O14531 572 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 PPP4CP60510 307 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 DDX12PQ92771 950 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 SLC26A8Q96RN1 970 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 PRKD2Q9BZL6 878 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 STK26Q9P289 416 aa8.17□□□□□ -1.1
ATXN3-230ENST00000554673 CENPJQ9HC77 1338 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-230ENST00000554673 ITSN1Q15811 1721 aa8.16□□□□□ -1.1
ATXN3-230ENST00000554673 PARD3Q8TEW0 1356 aa8.16□□□□□ -1.1
ATXN3-230ENST00000554673 PRAM1Q96QH2 718 aa8.16□□□□□ -1.1
ATXN3-230ENST00000554673 FAM135BQ49AJ0 1406 aa8.15□□□□□ -1.1
ATXN3-230ENST00000554673 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATXN3-230ENST00000554673 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
ATXN3-230ENST00000554673 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-230ENST00000554673 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
ATXN3-230ENST00000554673 PTCH1Q13635 1447 aa8.14□□□□□ -1.11
ATXN3-230ENST00000554673 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-230ENST00000554673 HSPA2P54652 639 aa8.14□□□□□ -1.11
ATXN3-230ENST00000554673 PACS2Q86VP3 889 aa8.14□□□□□ -1.11
ATXN3-230ENST00000554673 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
ATXN3-230ENST00000554673 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-230ENST00000554673 PEAK1Q9H792 1746 aa8.13□□□□□ -1.11
ATXN3-230ENST00000554673 SMAPO00193 183 aa8.13□□□□□ -1.11
ATXN3-230ENST00000554673 PANK3Q9H999 370 aa8.13□□□□□ -1.11
ATXN3-230ENST00000554673 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-230ENST00000554673 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
ATXN3-230ENST00000554673 USP54Q70EL1 1684 aa8.13□□□□□ -1.11
ATXN3-230ENST00000554673 A0A1W2PP64 1363 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 PIK3C2AO00443 1686 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 MAP3K7O43318 606 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 KCNA6P17658 529 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 AK7Q96M32 723 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 TBX22Q9Y458 520 aa8.12□□□□□ -1.11
ATXN3-230ENST00000554673 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-230ENST00000554673 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-230ENST00000554673 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
ATXN3-230ENST00000554673 MAP2P11137 1827 aaKnown RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 RNF40O75150 1001 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 TSR1Q2NL82 804 aaKnown RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 SMYD5Q6GMV2 418 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 PPP1R18Q6NYC8 613 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 POLR3GLQ9BT43 218 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-230ENST00000554673 SSH2Q76I76 1423 aa8.11□□□□□ -1.11
ATXN3-230ENST00000554673 MTRQ99707 1265 aa8.1□□□□□ -1.11
ATXN3-230ENST00000554673 NSD3Q9BZ95 1437 aa8.1□□□□□ -1.11
ATXN3-230ENST00000554673 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
ATXN3-230ENST00000554673 TMF1P82094 1093 aa8.09□□□□□ -1.11
ATXN3-230ENST00000554673 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
ATXN3-230ENST00000554673 THEMISQ8N1K5 641 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-230ENST00000554673 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-230ENST00000554673 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
ATXN3-230ENST00000554673 CDK19Q9BWU1 502 aa8.09□□□□□ -1.11
ATXN3-230ENST00000554673 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms