RNA–Protein interactions for RNA: ENST00000554540.1

AL163974.1-201, humanhuman

TSL 5 BASIC

Gene AL163974.1, Length 466 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL163974.1-201ENST00000554540 NBPF6Q5VWK0 638 aa21.06■□□□□ 0.96
AL163974.1-201ENST00000554540 NBPF4Q96M43 638 aa21.06■□□□□ 0.96
AL163974.1-201ENST00000554540 HMGB2P26583 209 aaKnown RBP21.05■□□□□ 0.96
AL163974.1-201ENST00000554540 RRS1Q15050 365 aaKnown RBP21.05■□□□□ 0.96
AL163974.1-201ENST00000554540 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
AL163974.1-201ENST00000554540 RAPGEF4Q8WZA2 1011 aa21.05■□□□□ 0.96
AL163974.1-201ENST00000554540 LTN1O94822 1766 aa21.05■□□□□ 0.96
AL163974.1-201ENST00000554540 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
AL163974.1-201ENST00000554540 CCNL1Q9UK58 526 aaPredicted RBP21.04■□□□□ 0.96
AL163974.1-201ENST00000554540 KAT6BQ8WYB5 2073 aa21.03■□□□□ 0.96
AL163974.1-201ENST00000554540 PAPPAQ13219 1627 aa21.03■□□□□ 0.96
AL163974.1-201ENST00000554540 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
AL163974.1-201ENST00000554540 TATP17735 454 aaPredicted RBP21.02■□□□□ 0.96
AL163974.1-201ENST00000554540 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
AL163974.1-201ENST00000554540 BTAF1O14981 1849 aa21.01■□□□□ 0.95
AL163974.1-201ENST00000554540 USP47Q96K76 1375 aa21■□□□□ 0.95
AL163974.1-201ENST00000554540 MSH5O43196 834 aa21■□□□□ 0.95
AL163974.1-201ENST00000554540 USHBP1Q8N6Y0 703 aa21■□□□□ 0.95
AL163974.1-201ENST00000554540 NSD2O96028 1365 aa20.99■□□□□ 0.95
AL163974.1-201ENST00000554540 HSP90AB2PQ58FF8 381 aa20.99■□□□□ 0.95
AL163974.1-201ENST00000554540 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
AL163974.1-201ENST00000554540 UTRNP46939 3433 aa20.99■□□□□ 0.95
AL163974.1-201ENST00000554540 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
AL163974.1-201ENST00000554540 COL23A1Q86Y22 540 aaPredicted RBP20.98■□□□□ 0.95
AL163974.1-201ENST00000554540 MEGF6O75095 1541 aa20.97■□□□□ 0.95
AL163974.1-201ENST00000554540 C1QTNF8P60827 252 aa20.96■□□□□ 0.95
AL163974.1-201ENST00000554540 INSRP06213 1382 aa20.96■□□□□ 0.95
AL163974.1-201ENST00000554540 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
AL163974.1-201ENST00000554540 FLAD1Q8NFF5 587 aa20.95■□□□□ 0.94
AL163974.1-201ENST00000554540 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
AL163974.1-201ENST00000554540 PCDH11XQ9BZA7 1347 aa20.95■□□□□ 0.94
AL163974.1-201ENST00000554540 PCDH11YQ9BZA8 1340 aa20.95■□□□□ 0.94
AL163974.1-201ENST00000554540 FAM208AQ9UK61 1670 aaKnown RBP20.94■□□□□ 0.94
AL163974.1-201ENST00000554540 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
AL163974.1-201ENST00000554540 MPRIPQ6WCQ1 1025 aa20.93■□□□□ 0.94
AL163974.1-201ENST00000554540 SMARCC1Q92922 1105 aaPredicted RBP20.92■□□□□ 0.94
AL163974.1-201ENST00000554540 FLT4P35916 1363 aa20.92■□□□□ 0.94
AL163974.1-201ENST00000554540 SENP3-EIF4A1A0A087X0R7 540 aa20.9■□□□□ 0.94
AL163974.1-201ENST00000554540 CYP27B1O15528 508 aa20.9■□□□□ 0.94
AL163974.1-201ENST00000554540 CARD14Q9BXL6 1004 aa20.9■□□□□ 0.94
AL163974.1-201ENST00000554540 MSL1Q68DK7 614 aa20.89■□□□□ 0.93
AL163974.1-201ENST00000554540 PALLDQ8WX93 1383 aa20.88■□□□□ 0.93
AL163974.1-201ENST00000554540 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
AL163974.1-201ENST00000554540 CD2APQ9Y5K6 639 aa20.88■□□□□ 0.93
AL163974.1-201ENST00000554540 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
AL163974.1-201ENST00000554540 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
AL163974.1-201ENST00000554540 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
AL163974.1-201ENST00000554540 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
AL163974.1-201ENST00000554540 EMILIN1Q9Y6C2 1016 aa20.87■□□□□ 0.93
AL163974.1-201ENST00000554540 AK7Q96M32 723 aa20.86■□□□□ 0.93
AL163974.1-201ENST00000554540 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
AL163974.1-201ENST00000554540 QSER1Q2KHR3 1735 aa20.85■□□□□ 0.93
AL163974.1-201ENST00000554540 PIGBQ92521 554 aa20.85■□□□□ 0.93
AL163974.1-201ENST00000554540 CHD4Q14839 1912 aa20.84■□□□□ 0.93
AL163974.1-201ENST00000554540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.93
AL163974.1-201ENST00000554540 TIMELESSQ9UNS1 1208 aa20.84■□□□□ 0.93
AL163974.1-201ENST00000554540 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
AL163974.1-201ENST00000554540 WASHC2AQ641Q2 1341 aa20.83■□□□□ 0.93
AL163974.1-201ENST00000554540 LY75O60449 1722 aa20.83■□□□□ 0.92
AL163974.1-201ENST00000554540 EYA1Q99502 592 aa20.82■□□□□ 0.92
AL163974.1-201ENST00000554540 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
AL163974.1-201ENST00000554540 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
AL163974.1-201ENST00000554540 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
AL163974.1-201ENST00000554540 LOC102724428A0A0B4J2F2 783 aa20.8■□□□□ 0.92
AL163974.1-201ENST00000554540 SIK1P57059 783 aa20.8■□□□□ 0.92
AL163974.1-201ENST00000554540 SHANK3Q9BYB0 1731 aa20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 PHF14O94880 888 aa20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 TMOD3Q9NYL9 352 aa20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 POLKQ9UBT6 870 aa20.79■□□□□ 0.92
AL163974.1-201ENST00000554540 SSFA2P28290 1259 aa20.78■□□□□ 0.92
AL163974.1-201ENST00000554540 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
AL163974.1-201ENST00000554540 PHKG2P15735 406 aa20.76■□□□□ 0.91
AL163974.1-201ENST00000554540 ATP6V1AP38606 617 aa20.76■□□□□ 0.91
AL163974.1-201ENST00000554540 ASAP1Q9ULH1 1129 aa20.76■□□□□ 0.91
AL163974.1-201ENST00000554540 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
AL163974.1-201ENST00000554540 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
AL163974.1-201ENST00000554540 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
AL163974.1-201ENST00000554540 NCAPD2Q15021 1401 aa20.75■□□□□ 0.91
AL163974.1-201ENST00000554540 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
AL163974.1-201ENST00000554540 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
AL163974.1-201ENST00000554540 GPBP1L1Q9HC44 474 aaPredicted RBP20.73■□□□□ 0.91
AL163974.1-201ENST00000554540 GNPATO15228 680 aa20.72■□□□□ 0.91
AL163974.1-201ENST00000554540 ITPK1Q13572 414 aa20.72■□□□□ 0.91
AL163974.1-201ENST00000554540 EIF4A2Q14240 407 aaKnown RBP20.72■□□□□ 0.91
AL163974.1-201ENST00000554540 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
AL163974.1-201ENST00000554540 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
AL163974.1-201ENST00000554540 IGSF1Q8N6C5 1336 aa20.71■□□□□ 0.91
AL163974.1-201ENST00000554540 ERVV-2B6SEH9 535 aa20.7■□□□□ 0.9
AL163974.1-201ENST00000554540 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
AL163974.1-201ENST00000554540 HSP90AB1P08238 724 aaKnown RBP20.69■□□□□ 0.9
AL163974.1-201ENST00000554540 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
AL163974.1-201ENST00000554540 C5P01031 1676 aa20.69■□□□□ 0.9
AL163974.1-201ENST00000554540 PLEKHO1Q53GL0 409 aaPredicted RBP20.68■□□□□ 0.9
AL163974.1-201ENST00000554540 RTCBQ9Y3I0 505 aaKnown RBP20.68■□□□□ 0.9
AL163974.1-201ENST00000554540 C4BP0C0L5 1744 aa20.67■□□□□ 0.9
AL163974.1-201ENST00000554540 NLGN1Q8N2Q7 840 aa20.67■□□□□ 0.9
AL163974.1-201ENST00000554540 DCAF5Q96JK2 942 aa20.67■□□□□ 0.9
AL163974.1-201ENST00000554540 WWC3Q9ULE0 1092 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms