RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 USP17L22D6RA61 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L17D6RBQ6 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L19D6RCP7 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L20D6RJB6 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 ERVH48-1M5A8F1 160 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 SIAH2O43255 324 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 GRM5P41594 1212 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 PDE4CQ08493 712 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP17L24Q0WX57 530 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 USP4Q13107 963 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 CRTC2Q53ET0 693 aaPredicted RBP8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
MTHFD1-206ENST00000554353 CUX2O14529 1486 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 FAM196BA6NMK8 535 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 ADH1CP00326 375 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 MYCP01106 439 aaPredicted RBP8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 ATP1A2P50993 1020 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 PSME1Q06323 249 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 MPNDQ8N594 471 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 TRAIPQ9BWF2 469 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 TMPRSS4Q9NRS4 437 aa8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
MTHFD1-206ENST00000554353 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 GTF2IP78347 998 aa8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 DHX9Q08211 1270 aaKnown RBP8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 PTK7Q13308 1070 aa8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
MTHFD1-206ENST00000554353 NESP48681 1621 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 SCTRP47872 440 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 CLDN10P78369 228 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 STK32AQ8WU08 396 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 ZMIZ1Q9ULJ6 1067 aa8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
MTHFD1-206ENST00000554353 NR5A1Q13285 461 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 ELOAQ14241 798 aaKnown RBP8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 PKD2L1Q9P0L9 805 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
MTHFD1-206ENST00000554353 PEG3Q9GZU2 1588 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 TNFRSF10AO00220 468 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 NR3C2P08235 984 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 DPYDQ12882 1025 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 ANKMY2Q8IV38 441 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 ZNF784Q8NCA9 323 aaPredicted RBP8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
MTHFD1-206ENST00000554353 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 GDF9O60383 454 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 CC2D2BQ6DHV5 1058 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 TPCN2Q8NHX9 752 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
MTHFD1-206ENST00000554353 ERVK-9P63128 1117 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 NNTQ13423 1086 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 CCDC102BQ68D86 513 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 TRIM52Q96A61 297 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 MROH2BQ7Z745 1585 aa8.51□□□□□ -1.05
MTHFD1-206ENST00000554353 MYT1Q01538 1121 aa8.5□□□□□ -1.05
MTHFD1-206ENST00000554353 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
MTHFD1-206ENST00000554353 ZBTB7CA1YPR0 619 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 J3QL48 77 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 SEC13P55735 322 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 PRR20EP86478 221 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 PRR20CP86479 221 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 PRR20DP86480 221 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 PRR20BP86481 221 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 PRR20AP86496 221 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 SIX5Q8N196 739 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 EMILIN1Q9Y6C2 1016 aa8.49□□□□□ -1.05
MTHFD1-206ENST00000554353 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
MTHFD1-206ENST00000554353 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
MTHFD1-206ENST00000554353 LILRA1O75019 489 aa8.47□□□□□ -1.05
MTHFD1-206ENST00000554353 DKK1O94907 266 aa8.47□□□□□ -1.05
MTHFD1-206ENST00000554353 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
MTHFD1-206ENST00000554353 THOC2Q8NI27 1593 aaKnown RBP8.47□□□□□ -1.05
MTHFD1-206ENST00000554353 LGR5O75473 907 aa8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 BRD1O95696 1058 aa8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
MTHFD1-206ENST00000554353 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms