RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
VPS33B-203ENST00000554264 ZNF511Q8NB15 262 aa8.81□□□□□ -1
VPS33B-203ENST00000554264 FOXJ1Q92949 421 aa8.81□□□□□ -1
VPS33B-203ENST00000554264 CEBPAP49715 358 aaPredicted RBP8.8□□□□□ -1
VPS33B-203ENST00000554264 FOXC1Q12948 553 aa8.8□□□□□ -1
VPS33B-203ENST00000554264 MCM6Q14566 821 aa8.8□□□□□ -1
VPS33B-203ENST00000554264 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
VPS33B-203ENST00000554264 FKBPLQ9UIM3 349 aa8.8□□□□□ -1
VPS33B-203ENST00000554264 PTPRTO14522 1441 aa8.8□□□□□ -1
VPS33B-203ENST00000554264 ZNF518AQ6AHZ1 1483 aa8.79□□□□□ -1
VPS33B-203ENST00000554264 WNT7BP56706 349 aa8.79□□□□□ -1
VPS33B-203ENST00000554264 OCSTAMPQ9BR26 566 aa8.79□□□□□ -1
VPS33B-203ENST00000554264 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
VPS33B-203ENST00000554264 CDK13Q14004 1512 aaKnown RBP8.79□□□□□ -1
VPS33B-203ENST00000554264 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
VPS33B-203ENST00000554264 TNFRSF10AO00220 468 aa8.78□□□□□ -1
VPS33B-203ENST00000554264 IQSEC2Q5JU85 1478 aa8.77□□□□□ -1
VPS33B-203ENST00000554264 STRCQ7RTU9 1775 aa8.77□□□□□ -1.01
VPS33B-203ENST00000554264 WNT7AO00755 349 aa8.77□□□□□ -1.01
VPS33B-203ENST00000554264 CENPBP07199 599 aaPredicted RBP8.77□□□□□ -1.01
VPS33B-203ENST00000554264 SH3BP5LQ7L8J4 393 aa8.77□□□□□ -1.01
VPS33B-203ENST00000554264 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
VPS33B-203ENST00000554264 MRGPRX2Q96LB1 330 aa8.77□□□□□ -1.01
VPS33B-203ENST00000554264 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
VPS33B-203ENST00000554264 SIAH2O43255 324 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 FMN1Q68DA7 1419 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 KDM5CP41229 1560 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 REREQ9P2R6 1566 aa8.76□□□□□ -1.01
VPS33B-203ENST00000554264 SETD1BQ9UPS6 1966 aaKnown RBP8.75□□□□□ -1.01
VPS33B-203ENST00000554264 MYO5CQ9NQX4 1742 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 TRAPPC8Q9Y2L5 1435 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 PDXDC2PQ6P474 469 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 AFAP1Q8N556 730 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 PDZRN3Q9UPQ7 1066 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
VPS33B-203ENST00000554264 CLIP1P30622 1438 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 KIF14Q15058 1648 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 PRR20EP86478 221 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 PRR20CP86479 221 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 PRR20DP86480 221 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 PRR20BP86481 221 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 PRR20AP86496 221 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 GDPD2Q9HCC8 539 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 MLH3Q9UHC1 1453 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 AGLP35573 1532 aa8.74□□□□□ -1.01
VPS33B-203ENST00000554264 DIP2CQ9Y2E4 1556 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 LTBP4Q8N2S1 1624 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 TROQ12816 1431 aaPredicted RBP8.73□□□□□ -1.01
VPS33B-203ENST00000554264 NCOA1Q15788 1441 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 CNTLNQ9NXG0 1405 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 GFRA3O60609 400 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 NBPF14Q5TI25 921 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 EHBP1Q8NDI1 1231 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 GPKOWQ92917 476 aaPredicted RBP eCLIP8.73□□□□□ -1.01
VPS33B-203ENST00000554264 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
VPS33B-203ENST00000554264 CEP162Q5TB80 1403 aa8.72□□□□□ -1.01
VPS33B-203ENST00000554264 IRF5Q13568 498 aa8.72□□□□□ -1.01
VPS33B-203ENST00000554264 BPHLQ86WA6 291 aaPredicted RBP8.72□□□□□ -1.01
VPS33B-203ENST00000554264 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
VPS33B-203ENST00000554264 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
VPS33B-203ENST00000554264 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
VPS33B-203ENST00000554264 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
VPS33B-203ENST00000554264 FLIIQ13045 1269 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 AGERQ15109 404 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 CCER1Q8TC90 406 aaPredicted RBP8.71□□□□□ -1.02
VPS33B-203ENST00000554264 C1QTNF2Q9BXJ5 285 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
VPS33B-203ENST00000554264 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 C3P01024 1663 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 NPATQ14207 1427 aa8.71□□□□□ -1.02
VPS33B-203ENST00000554264 ABCA6Q8N139 1617 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 J3QL48 77 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 FBXO45P0C2W1 286 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 CARD14Q9BXL6 1004 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 TLL2Q9Y6L7 1015 aa8.7□□□□□ -1.02
VPS33B-203ENST00000554264 ERFEQ4G0M1 354 aa8.69□□□□□ -1.02
VPS33B-203ENST00000554264 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
VPS33B-203ENST00000554264 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
VPS33B-203ENST00000554264 ABCC1P33527 1531 aa8.69□□□□□ -1.02
VPS33B-203ENST00000554264 SMPD1P17405 629 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 UBTFP17480 764 aaKnown RBP8.68□□□□□ -1.02
VPS33B-203ENST00000554264 PTK2Q05397 1052 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 CYP4X1Q8N118 509 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 GPSM3Q9Y4H4 160 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 ARHGAP35Q9NRY4 1499 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 CAMSAP1Q5T5Y3 1602 aa8.68□□□□□ -1.02
VPS33B-203ENST00000554264 UBAP1LF5GYI3 381 aa8.67□□□□□ -1.02
VPS33B-203ENST00000554264 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
VPS33B-203ENST00000554264 ABL2P42684 1182 aa8.67□□□□□ -1.02
VPS33B-203ENST00000554264 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
VPS33B-203ENST00000554264 CLUAP1Q96AJ1 413 aa8.67□□□□□ -1.02
VPS33B-203ENST00000554264 PLA2R1Q13018 1463 aa8.66□□□□□ -1.02
VPS33B-203ENST00000554264 ZMYM3Q14202 1370 aa8.66□□□□□ -1.02
VPS33B-203ENST00000554264 ZNF335Q9H4Z2 1342 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms