RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 FNBP4Q8N3X1 1017 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-225ENST00000554214 OSBPL3Q9H4L5 887 aa10.01□□□□□ -0.81
ATXN3-225ENST00000554214 POLMQ9NP87 494 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-225ENST00000554214 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
ATXN3-225ENST00000554214 A6NJR5 290 aa10□□□□□ -0.81
ATXN3-225ENST00000554214 PROSER2Q86WR7 435 aaPredicted RBP10□□□□□ -0.81
ATXN3-225ENST00000554214 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
ATXN3-225ENST00000554214 A0A1W2PRU2 124 aa9.99□□□□□ -0.81
ATXN3-225ENST00000554214 TRAK2O60296 914 aa9.99□□□□□ -0.81
ATXN3-225ENST00000554214 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
ATXN3-225ENST00000554214 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
ATXN3-225ENST00000554214 MEN1O00255 615 aa9.98□□□□□ -0.81
ATXN3-225ENST00000554214 PIK3CDO00329 1044 aa9.98□□□□□ -0.81
ATXN3-225ENST00000554214 TERTO14746 1132 aaKnown RBP9.98□□□□□ -0.81
ATXN3-225ENST00000554214 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.98□□□□□ -0.81
ATXN3-225ENST00000554214 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
ATXN3-225ENST00000554214 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
ATXN3-225ENST00000554214 PLPP7Q8NBV4 271 aa9.98□□□□□ -0.81
ATXN3-225ENST00000554214 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
ATXN3-225ENST00000554214 ADAMTS19Q8TE59 1207 aa9.97□□□□□ -0.81
ATXN3-225ENST00000554214 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
ATXN3-225ENST00000554214 GTF3C3Q9Y5Q9 886 aa9.97□□□□□ -0.81
ATXN3-225ENST00000554214 SKIP12755 728 aa9.96□□□□□ -0.82
ATXN3-225ENST00000554214 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
ATXN3-225ENST00000554214 WFS1O76024 890 aa9.95□□□□□ -0.82
ATXN3-225ENST00000554214 GNRH1P01148 92 aa9.95□□□□□ -0.82
ATXN3-225ENST00000554214 VEGFBP49765 207 aa9.95□□□□□ -0.82
ATXN3-225ENST00000554214 RNF144AP50876 292 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-225ENST00000554214 NFX1Q12986 1120 aaKnown RBP9.94□□□□□ -0.82
ATXN3-225ENST00000554214 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-225ENST00000554214 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
ATXN3-225ENST00000554214 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
ATXN3-225ENST00000554214 CLN3Q13286 438 aa9.93□□□□□ -0.82
ATXN3-225ENST00000554214 PRICKLE2Q7Z3G6 844 aa9.93□□□□□ -0.82
ATXN3-225ENST00000554214 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
ATXN3-225ENST00000554214 SLC16A10Q8TF71 515 aa9.93□□□□□ -0.82
ATXN3-225ENST00000554214 RAB6BQ9NRW1 208 aa9.93□□□□□ -0.82
ATXN3-225ENST00000554214 PTSQ03393 145 aa9.92□□□□□ -0.82
ATXN3-225ENST00000554214 LYSMD3Q7Z3D4 306 aa9.92□□□□□ -0.82
ATXN3-225ENST00000554214 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
ATXN3-225ENST00000554214 GPC1P35052 558 aa9.91□□□□□ -0.82
ATXN3-225ENST00000554214 CNKSR1Q969H4 720 aa9.91□□□□□ -0.82
ATXN3-225ENST00000554214 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-225ENST00000554214 PPFIA3O75145 1194 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 EML3Q32P44 896 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 SLC27A3Q5K4L6 730 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 GLMNQ92990 594 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 XAGE2Q96GT9 111 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 ESYT1Q9BSJ8 1104 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.82
ATXN3-225ENST00000554214 H3BM21 787 aa9.89□□□□□ -0.83
ATXN3-225ENST00000554214 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
ATXN3-225ENST00000554214 IL2RAP01589 272 aa9.89□□□□□ -0.83
ATXN3-225ENST00000554214 CENPCQ03188 943 aa9.89□□□□□ -0.83
ATXN3-225ENST00000554214 LCE2AQ5TA79 106 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-225ENST00000554214 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
ATXN3-225ENST00000554214 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
ATXN3-225ENST00000554214 ZNF777Q9ULD5 760 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-225ENST00000554214 RHOQP17081 205 aa9.88□□□□□ -0.83
ATXN3-225ENST00000554214 ESCO1Q5FWF5 840 aa9.88□□□□□ -0.83
ATXN3-225ENST00000554214 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
ATXN3-225ENST00000554214 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
ATXN3-225ENST00000554214 SLC35F4A4IF30 521 aa9.87□□□□□ -0.83
ATXN3-225ENST00000554214 USP17L5A8MUK1 530 aa9.87□□□□□ -0.83
ATXN3-225ENST00000554214 POU4F2Q12837 409 aa9.87□□□□□ -0.83
ATXN3-225ENST00000554214 NCOA4Q13772 614 aa9.87□□□□□ -0.83
ATXN3-225ENST00000554214 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
ATXN3-225ENST00000554214 IRF7Q92985 503 aa9.86□□□□□ -0.83
ATXN3-225ENST00000554214 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
ATXN3-225ENST00000554214 ETNK1Q9HBU6 452 aa9.86□□□□□ -0.83
ATXN3-225ENST00000554214 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
ATXN3-225ENST00000554214 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
ATXN3-225ENST00000554214 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
ATXN3-225ENST00000554214 ATP9BO43861 1147 aa9.85□□□□□ -0.83
ATXN3-225ENST00000554214 LCE2CQ5TA81 110 aa9.85□□□□□ -0.83
ATXN3-225ENST00000554214 INHAP05111 366 aa9.84□□□□□ -0.83
ATXN3-225ENST00000554214 GDF10P55107 478 aa9.84□□□□□ -0.83
ATXN3-225ENST00000554214 ZSCAN10Q96SZ4 725 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-225ENST00000554214 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 USP17L3A6NCW0 530 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 USP17L4A6NCW7 530 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 SCNN1DP51172 638 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 GTF2IP78347 998 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 USP17L1Q7RTZ2 530 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
ATXN3-225ENST00000554214 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
ATXN3-225ENST00000554214 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-225ENST00000554214 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
ATXN3-225ENST00000554214 NBPF10Q6P3W6 841 aaKnown RBP9.82□□□□□ -0.84
ATXN3-225ENST00000554214 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
ATXN3-225ENST00000554214 FHDC1Q9C0D6 1143 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-225ENST00000554214 SERTAD1Q9UHV2 236 aa9.82□□□□□ -0.84
ATXN3-225ENST00000554214 SPATA31C2B4DYI2 1134 aa9.81□□□□□ -0.84
ATXN3-225ENST00000554214 GMPRP36959 345 aa9.81□□□□□ -0.84
ATXN3-225ENST00000554214 PSME1Q06323 249 aa9.81□□□□□ -0.84
ATXN3-225ENST00000554214 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
ATXN3-225ENST00000554214 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
ATXN3-225ENST00000554214 MKRN1Q9UHC7 482 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms