RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SEMA3EO15041 775 aa10.69□□□□□ -0.7
ATXN3-224ENST00000554040 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-224ENST00000554040 MTRQ99707 1265 aa10.69□□□□□ -0.7
ATXN3-224ENST00000554040 TMEM131LA2VDJ0 1609 aa10.69□□□□□ -0.7
ATXN3-224ENST00000554040 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
ATXN3-224ENST00000554040 VPS8Q8N3P4 1428 aa10.68□□□□□ -0.7
ATXN3-224ENST00000554040 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
ATXN3-224ENST00000554040 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
ATXN3-224ENST00000554040 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
ATXN3-224ENST00000554040 TRPM2O94759 1503 aa10.67□□□□□ -0.7
ATXN3-224ENST00000554040 RNF40O75150 1001 aa10.66□□□□□ -0.7
ATXN3-224ENST00000554040 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
ATXN3-224ENST00000554040 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-224ENST00000554040 C1orf167Q5SNV9 1468 aa10.66□□□□□ -0.7
ATXN3-224ENST00000554040 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-224ENST00000554040 ANKRD50Q9ULJ7 1429 aa10.66□□□□□ -0.7
ATXN3-224ENST00000554040 NHSL1Q5SYE7 1610 aa10.66□□□□□ -0.7
ATXN3-224ENST00000554040 METP08581 1390 aa10.65□□□□□ -0.7
ATXN3-224ENST00000554040 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
ATXN3-224ENST00000554040 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
ATXN3-224ENST00000554040 BCL9LQ86UU0 1499 aa10.65□□□□□ -0.7
ATXN3-224ENST00000554040 ADGRL3Q9HAR2 1447 aa10.65□□□□□ -0.7
ATXN3-224ENST00000554040 MYO5BQ9ULV0 1848 aa10.64□□□□□ -0.71
ATXN3-224ENST00000554040 SF3B2Q13435 895 aaKnown RBP10.64□□□□□ -0.71
ATXN3-224ENST00000554040 PTPN23Q9H3S7 1636 aa10.64□□□□□ -0.71
ATXN3-224ENST00000554040 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
ATXN3-224ENST00000554040 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
ATXN3-224ENST00000554040 CROCC2H7BZ55 1655 aa10.63□□□□□ -0.71
ATXN3-224ENST00000554040 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
ATXN3-224ENST00000554040 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
ATXN3-224ENST00000554040 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
ATXN3-224ENST00000554040 HRCP23327 699 aa10.62□□□□□ -0.71
ATXN3-224ENST00000554040 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
ATXN3-224ENST00000554040 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
ATXN3-224ENST00000554040 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-224ENST00000554040 SEPT12Q8IYM1 358 aa10.6□□□□□ -0.71
ATXN3-224ENST00000554040 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
ATXN3-224ENST00000554040 TMEM134Q9H6X4 195 aa10.6□□□□□ -0.71
ATXN3-224ENST00000554040 MYOM2P54296 1465 aa10.6□□□□□ -0.71
ATXN3-224ENST00000554040 UNC13BO14795 1591 aa10.6□□□□□ -0.71
ATXN3-224ENST00000554040 XRN1Q8IZH2 1706 aaKnown RBP10.59□□□□□ -0.71
ATXN3-224ENST00000554040 DNAJB2P25686 324 aa10.59□□□□□ -0.71
ATXN3-224ENST00000554040 NPHP3Q7Z494 1330 aa10.58□□□□□ -0.71
ATXN3-224ENST00000554040 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
ATXN3-224ENST00000554040 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
ATXN3-224ENST00000554040 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
ATXN3-224ENST00000554040 RALGAPBQ86X10 1494 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 LOC105371045A0A1W2PR82 267 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 FOXO3O43524 673 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 FCHSD2O94868 740 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
ATXN3-224ENST00000554040 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 LRP5O75197 1615 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 LAMC1P11047 1609 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
ATXN3-224ENST00000554040 NUP155O75694 1391 aa10.56□□□□□ -0.72
ATXN3-224ENST00000554040 ROBO2Q9HCK4 1378 aa10.56□□□□□ -0.72
ATXN3-224ENST00000554040 BAG6P46379 1132 aa10.56□□□□□ -0.72
ATXN3-224ENST00000554040 COPS2P61201 443 aa10.56□□□□□ -0.72
ATXN3-224ENST00000554040 XPCQ01831 940 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-224ENST00000554040 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
ATXN3-224ENST00000554040 KRT27Q7Z3Y8 459 aa10.56□□□□□ -0.72
ATXN3-224ENST00000554040 GPR37O15354 613 aa10.55□□□□□ -0.72
ATXN3-224ENST00000554040 VPS72Q15906 364 aa10.55□□□□□ -0.72
ATXN3-224ENST00000554040 SLIT2O94813 1529 aa10.54□□□□□ -0.72
ATXN3-224ENST00000554040 YY1P25490 414 aa10.54□□□□□ -0.72
ATXN3-224ENST00000554040 COL22A1Q8NFW1 1626 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-224ENST00000554040 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
ATXN3-224ENST00000554040 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
ATXN3-224ENST00000554040 E9PCH4 1651 aa10.53□□□□□ -0.72
ATXN3-224ENST00000554040 GLI3P10071 1580 aa10.52□□□□□ -0.72
ATXN3-224ENST00000554040 ZPR1O75312 459 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 SLC10A3P09131 477 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 FECHP22830 423 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 R3HDM1Q15032 1099 aaKnown RBP10.52□□□□□ -0.73
ATXN3-224ENST00000554040 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
ATXN3-224ENST00000554040 PXDNQ92626 1479 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 SPATA31A3Q5VYP0 1347 aa10.52□□□□□ -0.73
ATXN3-224ENST00000554040 HFM1A2PYH4 1435 aa10.51□□□□□ -0.73
ATXN3-224ENST00000554040 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
ATXN3-224ENST00000554040 BLOC1S3Q6QNY0 202 aa10.51□□□□□ -0.73
ATXN3-224ENST00000554040 PRKD2Q9BZL6 878 aa10.51□□□□□ -0.73
ATXN3-224ENST00000554040 CCDC9Q9Y3X0 531 aaKnown RBP10.51□□□□□ -0.73
ATXN3-224ENST00000554040 HIC1Q14526 733 aa10.5□□□□□ -0.73
ATXN3-224ENST00000554040 PCDHB3Q9Y5E6 796 aa10.5□□□□□ -0.73
ATXN3-224ENST00000554040 ROCK1Q13464 1354 aa10.5□□□□□ -0.73
ATXN3-224ENST00000554040 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
ATXN3-224ENST00000554040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
ATXN3-224ENST00000554040 LCE2BO14633 110 aa10.49□□□□□ -0.73
ATXN3-224ENST00000554040 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
ATXN3-224ENST00000554040 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
ATXN3-224ENST00000554040 ACTN4O43707 911 aaKnown RBP10.48□□□□□ -0.73
ATXN3-224ENST00000554040 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-224ENST00000554040 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
ATXN3-224ENST00000554040 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
ATXN3-224ENST00000554040 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
ATXN3-224ENST00000554040 TLL1O43897 1013 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms