RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
TMEM55B-205ENST00000554028 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
TMEM55B-205ENST00000554028 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
TMEM55B-205ENST00000554028 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
TMEM55B-205ENST00000554028 CAMTA1Q9Y6Y1 1673 aa13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 E9PSI1 815 aa13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 ABCB7O75027 752 aa13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 MTHFSDQ2M296 383 aaKnown RBP13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 C8orf37Q96NL8 207 aa13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
TMEM55B-205ENST00000554028 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 COL18A1P39060 1754 aa13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 COL14A1Q05707 1796 aaKnown RBP13.65□□□□□ -0.22
TMEM55B-205ENST00000554028 ZNF521Q96K83 1311 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 CRB1P82279 1406 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 PLEKHG2Q9H7P9 1386 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 ZNF219Q9P2Y4 722 aaPredicted RBP13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
TMEM55B-205ENST00000554028 IL2RBP14784 551 aa13.63□□□□□ -0.23
TMEM55B-205ENST00000554028 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
TMEM55B-205ENST00000554028 USP35Q9P2H5 1018 aa13.63□□□□□ -0.23
TMEM55B-205ENST00000554028 IL16Q14005 1332 aa13.63□□□□□ -0.23
TMEM55B-205ENST00000554028 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
TMEM55B-205ENST00000554028 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
TMEM55B-205ENST00000554028 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
TMEM55B-205ENST00000554028 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
TMEM55B-205ENST00000554028 THRAP3Q9Y2W1 955 aaKnown RBP13.62□□□□□ -0.23
TMEM55B-205ENST00000554028 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
TMEM55B-205ENST00000554028 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-205ENST00000554028 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
TMEM55B-205ENST00000554028 CDCA7Q9BWT1 371 aaPredicted RBP13.61□□□□□ -0.23
TMEM55B-205ENST00000554028 USP21Q9UK80 565 aa13.61□□□□□ -0.23
TMEM55B-205ENST00000554028 MAP3K5Q99683 1374 aa13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 GNAI1P63096 354 aa13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 IFNL2Q8IZJ0 200 aa13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
TMEM55B-205ENST00000554028 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
TMEM55B-205ENST00000554028 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 VPS72Q15906 364 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 MCM10Q7L590 875 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 SLIT2O94813 1529 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 SPATA31A1Q5TZJ5 1347 aa13.58□□□□□ -0.24
TMEM55B-205ENST00000554028 EXOC5O00471 708 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 TEFQ10587 303 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 TRMT2AQ8IZ69 625 aaKnown RBP13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 SPATA31A5Q5VU36 1347 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 SPATA31A7Q8IWB4 1347 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
TMEM55B-205ENST00000554028 PHKG2P15735 406 aa13.56□□□□□ -0.24
TMEM55B-205ENST00000554028 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
TMEM55B-205ENST00000554028 MEGF6O75095 1541 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 LRP6O75581 1613 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 MPRIPQ6WCQ1 1025 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 AFF2P51816 1311 aa13.55□□□□□ -0.24
TMEM55B-205ENST00000554028 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
TMEM55B-205ENST00000554028 RNMTO43148 476 aaKnown RBP13.54□□□□□ -0.24
TMEM55B-205ENST00000554028 PLCH1Q4KWH8 1693 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 DDB1Q16531 1140 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
TMEM55B-205ENST00000554028 A0A0G2JS52 829 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 CHL1O00533 1208 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 CYP27B1O15528 508 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 MYT1Q01538 1121 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 LGR6Q9HBX8 967 aa13.52□□□□□ -0.25
TMEM55B-205ENST00000554028 NEFLP07196 543 aa13.51□□□□□ -0.25
TMEM55B-205ENST00000554028 CABP4P57796 275 aa13.51□□□□□ -0.25
TMEM55B-205ENST00000554028 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
TMEM55B-205ENST00000554028 GJD4Q96KN9 370 aaPredicted RBP13.51□□□□□ -0.25
TMEM55B-205ENST00000554028 MBIPQ9NS73 344 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms