RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 USP31Q70CQ4 1352 aa11.44□□□□□ -0.58
RDH11-205ENST00000553816 SOX12O15370 315 aa11.44□□□□□ -0.58
RDH11-205ENST00000553816 VPS72Q15906 364 aa11.44□□□□□ -0.58
RDH11-205ENST00000553816 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
RDH11-205ENST00000553816 OVOS2A0A0J9YW53 1432 aa11.43□□□□□ -0.58
RDH11-205ENST00000553816 OVOS2Q6IE36 1432 aa11.43□□□□□ -0.58
RDH11-205ENST00000553816 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
RDH11-205ENST00000553816 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
RDH11-205ENST00000553816 DCAF8Q5TAQ9 597 aa11.42□□□□□ -0.58
RDH11-205ENST00000553816 CARD14Q9BXL6 1004 aa11.42□□□□□ -0.58
RDH11-205ENST00000553816 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
RDH11-205ENST00000553816 CCDC9Q9Y3X0 531 aaKnown RBP11.42□□□□□ -0.58
RDH11-205ENST00000553816 COL5A2P05997 1499 aaPredicted RBP11.41□□□□□ -0.58
RDH11-205ENST00000553816 FBLN1P23142 703 aa11.41□□□□□ -0.58
RDH11-205ENST00000553816 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
RDH11-205ENST00000553816 STRN4Q9NRL3 753 aa11.41□□□□□ -0.58
RDH11-205ENST00000553816 AXIN2Q9Y2T1 843 aa11.41□□□□□ -0.58
RDH11-205ENST00000553816 WNK3Q9BYP7 1800 aa11.41□□□□□ -0.58
RDH11-205ENST00000553816 ANKRD26Q9UPS8 1709 aa11.4□□□□□ -0.58
RDH11-205ENST00000553816 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.58
RDH11-205ENST00000553816 FYB1O15117 783 aa11.4□□□□□ -0.58
RDH11-205ENST00000553816 RGPD2P0DJD1 1756 aa11.4□□□□□ -0.58
RDH11-205ENST00000553816 AATKQ6ZMQ8 1374 aa11.4□□□□□ -0.59
RDH11-205ENST00000553816 SPATA31A5Q5VU36 1347 aa11.39□□□□□ -0.59
RDH11-205ENST00000553816 SPATA31A7Q8IWB4 1347 aa11.39□□□□□ -0.59
RDH11-205ENST00000553816 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
RDH11-205ENST00000553816 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
RDH11-205ENST00000553816 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
RDH11-205ENST00000553816 GGNBP2Q9H3C7 697 aa11.39□□□□□ -0.59
RDH11-205ENST00000553816 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
RDH11-205ENST00000553816 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
RDH11-205ENST00000553816 SNPHO15079 494 aa11.38□□□□□ -0.59
RDH11-205ENST00000553816 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
RDH11-205ENST00000553816 FAM98CQ17RN3 349 aaKnown RBP11.38□□□□□ -0.59
RDH11-205ENST00000553816 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
RDH11-205ENST00000553816 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
RDH11-205ENST00000553816 EVA1CP58658 441 aa11.37□□□□□ -0.59
RDH11-205ENST00000553816 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
RDH11-205ENST00000553816 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
RDH11-205ENST00000553816 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
RDH11-205ENST00000553816 ABCC6O95255 1503 aa11.36□□□□□ -0.59
RDH11-205ENST00000553816 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
RDH11-205ENST00000553816 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
RDH11-205ENST00000553816 COG3Q96JB2 828 aa11.36□□□□□ -0.59
RDH11-205ENST00000553816 PANK3Q9H999 370 aa11.36□□□□□ -0.59
RDH11-205ENST00000553816 CRB1P82279 1406 aa11.35□□□□□ -0.59
RDH11-205ENST00000553816 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
RDH11-205ENST00000553816 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 MAP3K19Q56UN5 1328 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 WDR17Q8IZU2 1322 aa11.34□□□□□ -0.59
RDH11-205ENST00000553816 A0A0G2JS52 829 aa11.33□□□□□ -0.6
RDH11-205ENST00000553816 MYT1Q01538 1121 aa11.33□□□□□ -0.6
RDH11-205ENST00000553816 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
RDH11-205ENST00000553816 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
RDH11-205ENST00000553816 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
RDH11-205ENST00000553816 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
RDH11-205ENST00000553816 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
RDH11-205ENST00000553816 IP6K1Q92551 441 aa11.32□□□□□ -0.6
RDH11-205ENST00000553816 ERBB3P21860 1342 aa11.32□□□□□ -0.6
RDH11-205ENST00000553816 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 EMP3P54852 163 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 KRT27Q7Z3Y8 459 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 EP400Q96L91 3159 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
RDH11-205ENST00000553816 BLMP54132 1417 aaPredicted RBP11.3□□□□□ -0.6
RDH11-205ENST00000553816 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 HOXC9P31274 260 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 ANKRD24Q8TF21 1146 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
RDH11-205ENST00000553816 TNS1Q9HBL0 1735 aaKnown RBP11.29□□□□□ -0.6
RDH11-205ENST00000553816 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
RDH11-205ENST00000553816 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
RDH11-205ENST00000553816 AMPHP49418 695 aa11.29□□□□□ -0.6
RDH11-205ENST00000553816 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
RDH11-205ENST00000553816 LTV1Q96GA3 475 aaPredicted RBP11.29□□□□□ -0.6
RDH11-205ENST00000553816 CARD10Q9BWT7 1032 aa11.29□□□□□ -0.6
RDH11-205ENST00000553816 THRAP3Q9Y2W1 955 aaKnown RBP11.29□□□□□ -0.6
RDH11-205ENST00000553816 SHANK3Q9BYB0 1731 aa11.29□□□□□ -0.6
RDH11-205ENST00000553816 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
RDH11-205ENST00000553816 RGPD1P0DJD0 1748 aa11.28□□□□□ -0.6
RDH11-205ENST00000553816 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.61
RDH11-205ENST00000553816 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
RDH11-205ENST00000553816 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
RDH11-205ENST00000553816 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.61
RDH11-205ENST00000553816 RTL1A6NKG5 1358 aa11.27□□□□□ -0.61
RDH11-205ENST00000553816 POLKQ9UBT6 870 aa11.26□□□□□ -0.61
RDH11-205ENST00000553816 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
RDH11-205ENST00000553816 FLT4P35916 1363 aa11.26□□□□□ -0.61
RDH11-205ENST00000553816 FAM205CA6NFA0 338 aa11.25□□□□□ -0.61
RDH11-205ENST00000553816 NSD2O96028 1365 aa11.25□□□□□ -0.61
RDH11-205ENST00000553816 INSRP06213 1382 aa11.25□□□□□ -0.61
RDH11-205ENST00000553816 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
RDH11-205ENST00000553816 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
RDH11-205ENST00000553816 PDE3BQ13370 1112 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms