RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 PDILTQ8N807 584 aa18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 SIL1Q9H173 461 aa18.27■□□□□ 0.52
ARHGEF40-202ENST00000553709 CCDC158Q5M9N0 1113 aa18.27■□□□□ 0.51
ARHGEF40-202ENST00000553709 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.51
ARHGEF40-202ENST00000553709 ZCCHC11Q5TAX3 1644 aaKnown RBP18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 STK38Q15208 465 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 KDM4AO75164 1064 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 CCDC61Q9Y6R9 512 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 PREX2Q70Z35 1606 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 PKNOX2Q96KN3 472 aa18.26■□□□□ 0.51
ARHGEF40-202ENST00000553709 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 NEO1Q92859 1461 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 SMC2O95347 1197 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 CEBPZQ03701 1054 aaKnown RBP18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 KRT85P78386 507 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 ALDH1L2Q3SY69 923 aa18.25■□□□□ 0.51
ARHGEF40-202ENST00000553709 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 STK3Q13188 491 aa18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 CTDP1Q9Y5B0 961 aaPredicted RBP18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 AACSQ86V21 672 aa18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 THUMPD2Q9BTF0 503 aaKnown RBP18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
ARHGEF40-202ENST00000553709 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 ERCC6L2Q5T890 1561 aa18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 CABP4P57796 275 aa18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.23■□□□□ 0.51
ARHGEF40-202ENST00000553709 LRPPRCP42704 1394 aaKnown RBP18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 CNNM1Q9NRU3 951 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 ADCY10Q96PN6 1610 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 TNMDQ9H2S6 317 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 ACBD3Q9H3P7 528 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 ZSCAN31Q96LW9 406 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 FAM177BA6PVY3 158 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
ARHGEF40-202ENST00000553709 SPC24Q8NBT2 197 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 WAPLQ7Z5K2 1190 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 TNRQ92752 1358 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 MYL6BP14649 208 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
ARHGEF40-202ENST00000553709 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-202ENST00000553709 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
ARHGEF40-202ENST00000553709 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
ARHGEF40-202ENST00000553709 HSP90B2PQ58FF3 399 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 CCP110O43303 1012 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 CEBPAP49715 358 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 KDM6BO15054 1643 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 RUFY1Q96T51 708 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 ME1P48163 572 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 MCM10Q7L590 875 aa18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 CCDC43Q96MW1 224 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-202ENST00000553709 ABCC1P33527 1531 aa18.18■□□□□ 0.5
ARHGEF40-202ENST00000553709 FILIP1LQ4L180 1135 aa18.18■□□□□ 0.5
ARHGEF40-202ENST00000553709 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
ARHGEF40-202ENST00000553709 SLC3A2P08195 630 aaKnown RBP18.17■□□□□ 0.5
ARHGEF40-202ENST00000553709 MIS18AQ9NYP9 233 aa18.17■□□□□ 0.5
ARHGEF40-202ENST00000553709 MX1P20591 662 aa18.17■□□□□ 0.5
ARHGEF40-202ENST00000553709 AK7Q96M32 723 aa18.17■□□□□ 0.5
ARHGEF40-202ENST00000553709 ATP10AO60312 1499 aa18.17■□□□□ 0.5
ARHGEF40-202ENST00000553709 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 KRT32Q14532 448 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 NUTM1Q86Y26 1132 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 SPATA32Q96LK8 384 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 TXLNAP40222 546 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 ESPNB1AK53 854 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 OFD1O75665 1012 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 TRIM22Q8IYM9 498 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 KIF1BPQ96EK5 621 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
ARHGEF40-202ENST00000553709 PDIA4P13667 645 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 DHX8Q14562 1220 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 SMARCE1Q969G3 411 aa18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 EPS15P42566 896 aa18.15■□□□□ 0.5
ARHGEF40-202ENST00000553709 ZSCAN25Q6NSZ9 544 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms