RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.19
NRDE2-202ENST00000553409 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.19
NRDE2-202ENST00000553409 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
NRDE2-202ENST00000553409 GNAI1P63096 354 aa13.83□□□□□ -0.2
NRDE2-202ENST00000553409 ERC2O15083 957 aa13.82□□□□□ -0.2
NRDE2-202ENST00000553409 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
NRDE2-202ENST00000553409 ANKRD44Q8N8A2 993 aa13.82□□□□□ -0.2
NRDE2-202ENST00000553409 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
NRDE2-202ENST00000553409 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
NRDE2-202ENST00000553409 LRRC7Q96NW7 1537 aa13.82□□□□□ -0.2
NRDE2-202ENST00000553409 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
NRDE2-202ENST00000553409 STK26Q9P289 416 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 FAM135BQ49AJ0 1406 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 ZNF853P0CG23 659 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 GTF2F1P35269 517 aaKnown RBP eCLIP13.81□□□□□ -0.2
NRDE2-202ENST00000553409 HMGN5P82970 282 aaKnown RBP13.81□□□□□ -0.2
NRDE2-202ENST00000553409 ATP2B3Q16720 1220 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
NRDE2-202ENST00000553409 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
NRDE2-202ENST00000553409 PPP4R3BQ5MIZ7 849 aa13.8□□□□□ -0.2
NRDE2-202ENST00000553409 CHD1O14646 1710 aa13.8□□□□□ -0.2
NRDE2-202ENST00000553409 CEP85Q6P2H3 762 aa13.8□□□□□ -0.2
NRDE2-202ENST00000553409 GLI2P10070 1586 aa13.8□□□□□ -0.2
NRDE2-202ENST00000553409 KIF3AQ9Y496 699 aa13.8□□□□□ -0.2
NRDE2-202ENST00000553409 ATP10DQ9P241 1426 aa13.79□□□□□ -0.2
NRDE2-202ENST00000553409 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
NRDE2-202ENST00000553409 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
NRDE2-202ENST00000553409 ADCY5O95622 1261 aa13.79□□□□□ -0.2
NRDE2-202ENST00000553409 CUL4AQ13619 759 aa13.79□□□□□ -0.2
NRDE2-202ENST00000553409 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
NRDE2-202ENST00000553409 PPLO60437 1756 aa13.79□□□□□ -0.2
NRDE2-202ENST00000553409 NPATQ14207 1427 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 RPAP2Q8IXW5 612 aaPredicted RBP13.78□□□□□ -0.2
NRDE2-202ENST00000553409 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 MINK1Q8N4C8 1332 aaPredicted RBP13.78□□□□□ -0.2
NRDE2-202ENST00000553409 PHF14O94880 888 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 BCL2L12Q9HB09 334 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 PALD1Q9ULE6 856 aa13.78□□□□□ -0.2
NRDE2-202ENST00000553409 FAM83GA6ND36 823 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.2
NRDE2-202ENST00000553409 KRT24Q2M2I5 525 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 UVSSAQ2YD98 709 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 YEATS2Q9ULM3 1422 aa13.77□□□□□ -0.2
NRDE2-202ENST00000553409 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
NRDE2-202ENST00000553409 SPTLC3Q9NUV7 552 aa13.77□□□□□ -0.21
NRDE2-202ENST00000553409 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.21
NRDE2-202ENST00000553409 CD163L1Q9NR16 1453 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
NRDE2-202ENST00000553409 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
NRDE2-202ENST00000553409 MCM2P49736 904 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 GGT6Q6P531 493 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 GTPBP4Q9BZE4 634 aaKnown RBP13.76□□□□□ -0.21
NRDE2-202ENST00000553409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
NRDE2-202ENST00000553409 MEIS3Q99687 375 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
NRDE2-202ENST00000553409 INTS4Q96HW7 963 aaKnown RBP13.76□□□□□ -0.21
NRDE2-202ENST00000553409 PDE1AP54750 535 aa13.75□□□□□ -0.21
NRDE2-202ENST00000553409 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
NRDE2-202ENST00000553409 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
NRDE2-202ENST00000553409 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
NRDE2-202ENST00000553409 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
NRDE2-202ENST00000553409 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
NRDE2-202ENST00000553409 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
NRDE2-202ENST00000553409 CAMSAP1Q5T5Y3 1602 aa13.74□□□□□ -0.21
NRDE2-202ENST00000553409 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
NRDE2-202ENST00000553409 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
NRDE2-202ENST00000553409 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 ESYT1Q9BSJ8 1104 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 KIF20AO95235 890 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 CCDC183Q5T5S1 534 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 EMILIN1Q9Y6C2 1016 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 MSH6P52701 1360 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 CDC42BPGQ6DT37 1551 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
NRDE2-202ENST00000553409 KDM4AO75164 1064 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
NRDE2-202ENST00000553409 IGSF3O75054 1194 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 U2AF2P26368 475 aaKnown RBP eCLIP13.72□□□□□ -0.211e-6■■□□□ 14.2
NRDE2-202ENST00000553409 SRCIN1Q9C0H9 1055 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 RGS12O14924 1447 aa13.72□□□□□ -0.21
NRDE2-202ENST00000553409 WDR33Q9C0J8 1336 aaKnown RBP13.72□□□□□ -0.21
NRDE2-202ENST00000553409 MX1P20591 662 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 IL13P35225 146 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 KIAA1524Q8TCG1 905 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 CNPY2Q9Y2B0 182 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
NRDE2-202ENST00000553409 AP5Z1O43299 807 aa13.71□□□□□ -0.22
NRDE2-202ENST00000553409 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.22
NRDE2-202ENST00000553409 MCCP23508 829 aa13.71□□□□□ -0.22
NRDE2-202ENST00000553409 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms