RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 CTCFP49711 727 aaPredicted RBP6.4□□□□□ -1.38
PFDN5-219ENST00000553171 HDGFP51858 240 aaKnown RBP6.4□□□□□ -1.38
PFDN5-219ENST00000553171 FAM50AQ14320 339 aaKnown RBP6.4□□□□□ -1.38
PFDN5-219ENST00000553171 SLC15A2Q16348 729 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 NBPF11Q86T75 865 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 CDAN1Q8IWY9 1227 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 PROM2Q8N271 834 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 METRNQ9UJH8 293 aa6.4□□□□□ -1.38
PFDN5-219ENST00000553171 ATP1B4Q9UN42 357 aaPredicted RBP6.4□□□□□ -1.38
PFDN5-219ENST00000553171 SPATA31A5Q5VU36 1347 aa6.4□□□□□ -1.39
PFDN5-219ENST00000553171 NPHP3Q7Z494 1330 aa6.4□□□□□ -1.39
PFDN5-219ENST00000553171 SPATA31A7Q8IWB4 1347 aa6.4□□□□□ -1.39
PFDN5-219ENST00000553171 CENPJQ9HC77 1338 aaPredicted RBP6.4□□□□□ -1.39
PFDN5-219ENST00000553171 MTUS2Q5JR59 1369 aa6.4□□□□□ -1.39
PFDN5-219ENST00000553171 ZFYVE9O95405 1425 aa6.4□□□□□ -1.39
PFDN5-219ENST00000553171 APBB1O00213 710 aa6.39□□□□□ -1.39
PFDN5-219ENST00000553171 NBPF20Q3BBV1 942 aa6.39□□□□□ -1.39
PFDN5-219ENST00000553171 SPTY2D1Q68D10 685 aaPredicted RBP6.39□□□□□ -1.39
PFDN5-219ENST00000553171 RIPOR2Q9Y4F9 1068 aa6.39□□□□□ -1.39
PFDN5-219ENST00000553171 PXDNQ92626 1479 aa6.39□□□□□ -1.39
PFDN5-219ENST00000553171 A0A0C4DFX4 3053 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 ZNF316A6NFI3 1004 aaPredicted RBP6.38□□□□□ -1.39
PFDN5-219ENST00000553171 ANP32AP39687 249 aaKnown RBP6.38□□□□□ -1.39
PFDN5-219ENST00000553171 HSP90AA2PQ14568 343 aaPredicted RBP6.38□□□□□ -1.39
PFDN5-219ENST00000553171 NEUROD2Q15784 382 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 NBPF1Q3BBV0 1214 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 CASC1Q6TDU7 716 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 AEBP1Q8IUX7 1158 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 PHF12Q96QT6 1004 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 STK32BQ9NY57 414 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 CFDP1Q9UEE9 299 aaPredicted RBP6.38□□□□□ -1.39
PFDN5-219ENST00000553171 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 FANCIQ9NVI1 1328 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 DHX57Q6P158 1386 aaKnown RBP6.38□□□□□ -1.39
PFDN5-219ENST00000553171 ADGRL2O95490 1459 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 MBD5Q9P267 1494 aa6.38□□□□□ -1.39
PFDN5-219ENST00000553171 ARHGEF28Q8N1W1 1705 aaKnown RBP6.37□□□□□ -1.39
PFDN5-219ENST00000553171 EHBP1L1Q8N3D4 1523 aa6.37□□□□□ -1.39
PFDN5-219ENST00000553171 FYCO1Q9BQS8 1478 aa6.37□□□□□ -1.39
PFDN5-219ENST00000553171 IRX3P78415 501 aaPredicted RBP6.37□□□□□ -1.39
PFDN5-219ENST00000553171 PRDM4Q9UKN5 801 aa6.37□□□□□ -1.39
PFDN5-219ENST00000553171 RGPD3A6NKT7 1758 aaPredicted RBP6.36□□□□□ -1.39
PFDN5-219ENST00000553171 RGPD4Q7Z3J3 1758 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 PLCH1Q4KWH8 1693 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 PTPN23Q9H3S7 1636 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 NOL8Q76FK4 1167 aaKnown RBP6.36□□□□□ -1.39
PFDN5-219ENST00000553171 ANKRD13AQ8IZ07 590 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 GCC1Q96CN9 775 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 MYH16Q9H6N6 1097 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 NMRK2Q9NPI5 230 aa6.36□□□□□ -1.39
PFDN5-219ENST00000553171 SPATA31A3Q5VYP0 1347 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 NRDCO43847 1150 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 APPP05067 770 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 LBX1P52954 281 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 ASTLQ6HA08 431 aaPredicted RBP6.35□□□□□ -1.39
PFDN5-219ENST00000553171 MAMSTRQ6ZN01 415 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 TSHZ1Q6ZSZ6 1077 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 FAM9BQ8IZU0 186 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 TULP4Q9NRJ4 1543 aa6.35□□□□□ -1.39
PFDN5-219ENST00000553171 RIMS2Q9UQ26 1411 aa6.34□□□□□ -1.39
PFDN5-219ENST00000553171 HMGB1P1B2RPK0 211 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 FOXO3O43524 673 aa6.34□□□□□ -1.39
PFDN5-219ENST00000553171 XPCQ01831 940 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 PDE3BQ13370 1112 aa6.34□□□□□ -1.39
PFDN5-219ENST00000553171 HABP4Q5JVS0 413 aaKnown RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 C16orf71Q8IYS4 520 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 IL27Q8NEV9 243 aa6.34□□□□□ -1.39
PFDN5-219ENST00000553171 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 BTG4Q9NY30 223 aa6.34□□□□□ -1.39
PFDN5-219ENST00000553171 NOP58Q9Y2X3 529 aaKnown RBP6.34□□□□□ -1.39
PFDN5-219ENST00000553171 PRAG1Q86YV5 1406 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 CACNA1AO00555 2505 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 CALRP27797 417 aaKnown RBP6.33□□□□□ -1.4
PFDN5-219ENST00000553171 POLD1P28340 1107 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 SLC17A8Q8NDX2 589 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 SLC52A1Q9NWF4 448 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 NRAPQ86VF7 1730 aa6.33□□□□□ -1.4
PFDN5-219ENST00000553171 ZNF644Q9H582 1327 aaPredicted RBP6.32□□□□□ -1.4
PFDN5-219ENST00000553171 ATMINO43313 823 aaPredicted RBP6.32□□□□□ -1.4
PFDN5-219ENST00000553171 ATXN8OSP0DMR3 200 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 C7P10643 843 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 ERCC3P19447 782 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 MMRN1Q13201 1228 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 RINLQ6ZS11 566 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 CABLES1Q8TDN4 633 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 SLC39A7Q92504 469 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 AIDAQ96BJ3 306 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 SGSM3Q96HU1 749 aa6.32□□□□□ -1.4
PFDN5-219ENST00000553171 LRPPRCP42704 1394 aaKnown RBP6.31□□□□□ -1.4
PFDN5-219ENST00000553171 SPATA31A1Q5TZJ5 1347 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 CEP152O94986 1710 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 XRN1Q8IZH2 1706 aaKnown RBP6.31□□□□□ -1.4
PFDN5-219ENST00000553171 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
PFDN5-219ENST00000553171 GORABQ5T7V8 394 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 SCUBE2Q9NQ36 999 aa6.31□□□□□ -1.4
PFDN5-219ENST00000553171 CREBZFQ9NS37 354 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms